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authorCoprDistGit <infra@openeuler.org>2023-05-15 05:43:06 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-15 05:43:06 +0000
commitc00276cf169e13b3d3185d03b3704049949800c8 (patch)
treeafea735249f7bccc30a56906db128b9572a0987a
parent675b631d7079608ff516e2b8fef9d95d5c2b04ee (diff)
automatic import of python-bio2bel
-rw-r--r--.gitignore1
-rw-r--r--python-bio2bel.spec104
-rw-r--r--sources1
3 files changed, 106 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..21ddc41 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/bio2bel-0.4.2.tar.gz
diff --git a/python-bio2bel.spec b/python-bio2bel.spec
new file mode 100644
index 0000000..d979f2b
--- /dev/null
+++ b/python-bio2bel.spec
@@ -0,0 +1,104 @@
+%global _empty_manifest_terminate_build 0
+Name: python-bio2bel
+Version: 0.4.2
+Release: 1
+Summary: A framework for converting biological data sources to BEL
+License: MIT
+URL: https://github.com/bio2bel/bio2bel
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/34/a1/d53cd8eaad3080920ecc5197ac8a0947086f8a59d9400808e3d0ce38084a/bio2bel-0.4.2.tar.gz
+BuildArch: noarch
+
+Requires: python3-sqlalchemy
+Requires: python3-click
+Requires: python3-numpy
+Requires: python3-pandas
+Requires: python3-tqdm
+Requires: python3-easy-config
+Requires: python3-pybel
+Requires: python3-bel-resources
+Requires: python3-pyobo
+Requires: python3-pystow
+Requires: python3-sphinx
+Requires: python3-sphinx-rtd-theme
+Requires: python3-sphinx-click
+Requires: python3-sphinx-autodoc-typehints
+Requires: python3-flask
+Requires: python3-flask-admin
+Requires: python3-flask-bootstrap
+
+%description
+Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
+of schemata into the unified framework of the
+`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
+Two important places to look:
+- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
+- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
+
+%package -n python3-bio2bel
+Summary: A framework for converting biological data sources to BEL
+Provides: python-bio2bel
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-bio2bel
+Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
+of schemata into the unified framework of the
+`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
+Two important places to look:
+- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
+- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
+
+%package help
+Summary: Development documents and examples for bio2bel
+Provides: python3-bio2bel-doc
+%description help
+Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
+of schemata into the unified framework of the
+`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
+Two important places to look:
+- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
+- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
+
+%prep
+%autosetup -n bio2bel-0.4.2
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-bio2bel -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Mon May 15 2023 Python_Bot <Python_Bot@openeuler.org> - 0.4.2-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..ad766a5
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+9807773257663b1f406f0579f2c6211f bio2bel-0.4.2.tar.gz