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author | CoprDistGit <infra@openeuler.org> | 2023-05-18 04:24:28 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-05-18 04:24:28 +0000 |
commit | 9d60cbeed1614c05a1cfa6d733005a7a9a67b6fa (patch) | |
tree | 4ad573c975c1afe62913e9289affa516a7717b21 | |
parent | fdbe8c9e0aca27dee75b4a1e681b195e03c3c5cf (diff) |
automatic import of python-biosimulators-copasi
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-biosimulators-copasi.spec | 117 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 119 insertions, 0 deletions
@@ -0,0 +1 @@ +/biosimulators_copasi-0.1.35.tar.gz diff --git a/python-biosimulators-copasi.spec b/python-biosimulators-copasi.spec new file mode 100644 index 0000000..e8d6fcb --- /dev/null +++ b/python-biosimulators-copasi.spec @@ -0,0 +1,117 @@ +%global _empty_manifest_terminate_build 0 +Name: python-biosimulators-copasi +Version: 0.1.35 +Release: 1 +Summary: BioSimulators-compliant command-line interface to the COPASI simulation program <http://copasi.org>. +License: MIT +URL: https://github.com/biosimulators/biosimulators_copasi +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/43/0e/dbd010910309ccdba56945cc7b04c6876787f6f056f6a7fef7a94a626233/biosimulators_copasi-0.1.35.tar.gz +BuildArch: noarch + +Requires: python3-biosimulators-utils[logging,sbml] +Requires: python3-kisao +Requires: python3-lxml +Requires: python3-numpy +Requires: python3-copasi +Requires: python3-biosimulators-utils[containers] +Requires: python3-dateutil +Requires: python3-biosimulators-utils[containers] +Requires: python3-dateutil + +%description +BioSimulators-compliant command-line interface and Docker image for the +`COPASI <http://copasi.org/>`__ simulation program. +This command-line interface and Docker image enable users to use COPASI +to execute `COMBINE/OMEX archives <https://combinearchive.org/>`__ that +describe one or more simulation experiments (in `SED-ML +format <https://sed-ml.org>`__) of one or more models (in `SBML +format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by COPASI is +available at +`BioSimulators <https://biosimulators.org/simulators/copasi>`__. +A simple web application and web service for using COPASI to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%package -n python3-biosimulators-copasi +Summary: BioSimulators-compliant command-line interface to the COPASI simulation program <http://copasi.org>. +Provides: python-biosimulators-copasi +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-biosimulators-copasi +BioSimulators-compliant command-line interface and Docker image for the +`COPASI <http://copasi.org/>`__ simulation program. +This command-line interface and Docker image enable users to use COPASI +to execute `COMBINE/OMEX archives <https://combinearchive.org/>`__ that +describe one or more simulation experiments (in `SED-ML +format <https://sed-ml.org>`__) of one or more models (in `SBML +format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by COPASI is +available at +`BioSimulators <https://biosimulators.org/simulators/copasi>`__. +A simple web application and web service for using COPASI to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%package help +Summary: Development documents and examples for biosimulators-copasi +Provides: python3-biosimulators-copasi-doc +%description help +BioSimulators-compliant command-line interface and Docker image for the +`COPASI <http://copasi.org/>`__ simulation program. +This command-line interface and Docker image enable users to use COPASI +to execute `COMBINE/OMEX archives <https://combinearchive.org/>`__ that +describe one or more simulation experiments (in `SED-ML +format <https://sed-ml.org>`__) of one or more models (in `SBML +format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by COPASI is +available at +`BioSimulators <https://biosimulators.org/simulators/copasi>`__. +A simple web application and web service for using COPASI to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%prep +%autosetup -n biosimulators-copasi-0.1.35 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-biosimulators-copasi -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Thu May 18 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.35-1 +- Package Spec generated @@ -0,0 +1 @@ +6c8082d3adf51052153b48b7cba6fcac biosimulators_copasi-0.1.35.tar.gz |