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| -rw-r--r-- | python-chip-r.spec | 74 | ||||
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@@ -0,0 +1 @@ +/ChIP-R-1.2.0.tar.gz diff --git a/python-chip-r.spec b/python-chip-r.spec new file mode 100644 index 0000000..800b5a0 --- /dev/null +++ b/python-chip-r.spec @@ -0,0 +1,74 @@ +%global _empty_manifest_terminate_build 0 +Name: python-ChIP-R +Version: 1.2.0 +Release: 1 +Summary: ChIP-R is a method for assessing the reproducibility of replicated ChIP-seq type experiments. It incorporates the rank product method, a novel thresholding methods, and the use of peak fragmentation return the most reproducible peaks. +License: GPL-3.0 +URL: https://github.com/rhysnewell/ChIP-R +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/9e/96/0388e48a47fee8c584da2d4cb020d83a818141453fa3ee0c43c987d69f64/ChIP-R-1.2.0.tar.gz +BuildArch: noarch + +Requires: python3-scipy +Requires: python3-numpy + +%description +ChIP-R uses an adaptation of the rank product statistic to assess the reproducibility of ChIP-seq peaks by incorporating information from multiple ChIP-seq replicates and "fragmenting" peak locations to better combine the information present across the replicates. + +%package -n python3-ChIP-R +Summary: ChIP-R is a method for assessing the reproducibility of replicated ChIP-seq type experiments. It incorporates the rank product method, a novel thresholding methods, and the use of peak fragmentation return the most reproducible peaks. +Provides: python-ChIP-R +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-ChIP-R +ChIP-R uses an adaptation of the rank product statistic to assess the reproducibility of ChIP-seq peaks by incorporating information from multiple ChIP-seq replicates and "fragmenting" peak locations to better combine the information present across the replicates. + +%package help +Summary: Development documents and examples for ChIP-R +Provides: python3-ChIP-R-doc +%description help +ChIP-R uses an adaptation of the rank product statistic to assess the reproducibility of ChIP-seq peaks by incorporating information from multiple ChIP-seq replicates and "fragmenting" peak locations to better combine the information present across the replicates. + +%prep +%autosetup -n ChIP-R-1.2.0 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-ChIP-R -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Thu May 18 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.0-1 +- Package Spec generated @@ -0,0 +1 @@ +7015a90724e73e8adb34f6172d5a1054 ChIP-R-1.2.0.tar.gz |