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%global _empty_manifest_terminate_build 0
Name: python-extaxsi
Version: 0.3.9
Release: 1
Summary: Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations
License: MIT
URL: https://github.com/user/extaxsi
Source0: https://mirrors.aliyun.com/pypi/web/packages/e9/0e/cffc18266d0c7812b68493ba71e0399885c145feb426cce437387e901601/extaxsi-0.3.9.tar.gz
BuildArch: noarch
%description
ExTaxsI functions
Library overview
ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
* db_creation() - create FASTA, accession with taxonomy or enriched database
* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
* sunburst_plot() - create sunburst plot
* scatterplot() - create scatterplot
* worldmap_plot() - create worldmap plot
In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
Input files used are available in the **examples** directory.
For any doubt, please write to g.agostinetto@campus.unimib.it
%package -n python3-extaxsi
Summary: Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations
Provides: python-extaxsi
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-extaxsi
ExTaxsI functions
Library overview
ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
* db_creation() - create FASTA, accession with taxonomy or enriched database
* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
* sunburst_plot() - create sunburst plot
* scatterplot() - create scatterplot
* worldmap_plot() - create worldmap plot
In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
Input files used are available in the **examples** directory.
For any doubt, please write to g.agostinetto@campus.unimib.it
%package help
Summary: Development documents and examples for extaxsi
Provides: python3-extaxsi-doc
%description help
ExTaxsI functions
Library overview
ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
* db_creation() - create FASTA, accession with taxonomy or enriched database
* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
* sunburst_plot() - create sunburst plot
* scatterplot() - create scatterplot
* worldmap_plot() - create worldmap plot
In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
Input files used are available in the **examples** directory.
For any doubt, please write to g.agostinetto@campus.unimib.it
%prep
%autosetup -n extaxsi-0.3.9
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-extaxsi -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 0.3.9-1
- Package Spec generated
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