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@@ -0,0 +1 @@ +/fastcluster-1.2.6.tar.gz diff --git a/python-fastcluster.spec b/python-fastcluster.spec new file mode 100644 index 0000000..03a8c70 --- /dev/null +++ b/python-fastcluster.spec @@ -0,0 +1,244 @@ +%global _empty_manifest_terminate_build 0 +Name: python-fastcluster +Version: 1.2.6 +Release: 1 +Summary: Fast hierarchical clustering routines for R and Python. +License: BSD <http://opensource.org/licenses/BSD-2-Clause> +URL: http://danifold.net +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/5d/b8/f143d907d93bd4a3dd51d07c4e79b37bedbfc2177f4949bfa0d6ba0af647/fastcluster-1.2.6.tar.gz + +Requires: python3-numpy +Requires: python3-scipy + +%description + +This library provides Python functions for hierarchical clustering. It +generates hierarchical clusters from distance matrices or from vector data. + +This module is intended to replace the functions +``` + linkage, single, complete, average, weighted, centroid, median, ward +``` +in the module [`scipy.cluster.hierarchy`]( +https://docs.scipy.org/doc/scipy/reference/cluster.hierarchy.html) with the same +functionality but much faster algorithms. Moreover, the function +`linkage_vector` provides memory-efficient clustering for vector data. + +The interface is very similar to MATLAB's Statistics Toolbox API to make code +easier to port from MATLAB to Python/NumPy. The core implementation of this +library is in C++ for efficiency. + +**User manual:** [fastcluster.pdf]( +https://github.com/dmuellner/fastcluster/raw/master/docs/fastcluster.pdf). + +The “Yule” distance function changed in fastcluster version 1.2.0. This is +following a [change in SciPy 1.6.3]( +https://github.com/scipy/scipy/commit/3b22d1da98dc1b5f64bc944c21f398d4ba782bce). +It is recommended to use fastcluster version 1.1.x together with SciPy versions +before 1.6.3 and fastcluster 1.2.x with SciPy ≥1.6.3. + +The fastcluster package is considered stable and will undergo few changes +from now on. If some years from now there have not been any updates, this does +not necessarily mean that the package is unmaintained but maybe it just was +not necessary to correct anything. Of course, please still report potential +bugs and incompatibilities to daniel@danifold.net. You may also use +[my GitHub repository](https://github.com/dmuellner/fastcluster/) +for bug reports, pull requests etc. + +Note that [PyPI](https://pypi.org/project/fastcluster/) and [my GitHub +repository](https://github.com/dmuellner/fastcluster/) host the source code +for the Python interface only. The archive with both the R and the Python +interface is available on +[CRAN](https://CRAN.R-project.org/package=fastcluster) and the GitHub repository +[“cran/fastcluster”](https://github.com/cran/fastcluster). Even though I appear +as the author also of this second GitHub repository, this is just an automatic, +read-only mirror of the CRAN archive, so please do not attempt to report bugs or +contact me via this repository. + +Installation files for Windows are provided on [PyPI]( +https://pypi.org/project/fastcluster/#files) and on [Christoph Gohlke's web +page](http://www.lfd.uci.edu/~gohlke/pythonlibs/#fastcluster). + +Christoph Dalitz wrote a pure [C++ interface to fastcluster]( +https://lionel.kr.hs-niederrhein.de/~dalitz/data/hclust/). + +Reference: Daniel Müllner, *fastcluster: Fast Hierarchical, Agglomerative +Clustering Routines for R and Python*, Journal of Statistical Software, **53** +(2013), no. 9, 1–18, https://doi.org/10.18637/jss.v053.i09. + + + + +%package -n python3-fastcluster +Summary: Fast hierarchical clustering routines for R and Python. +Provides: python-fastcluster +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +BuildRequires: python3-cffi +BuildRequires: gcc +BuildRequires: gdb +%description -n python3-fastcluster + +This library provides Python functions for hierarchical clustering. It +generates hierarchical clusters from distance matrices or from vector data. + +This module is intended to replace the functions +``` + linkage, single, complete, average, weighted, centroid, median, ward +``` +in the module [`scipy.cluster.hierarchy`]( +https://docs.scipy.org/doc/scipy/reference/cluster.hierarchy.html) with the same +functionality but much faster algorithms. Moreover, the function +`linkage_vector` provides memory-efficient clustering for vector data. + +The interface is very similar to MATLAB's Statistics Toolbox API to make code +easier to port from MATLAB to Python/NumPy. The core implementation of this +library is in C++ for efficiency. + +**User manual:** [fastcluster.pdf]( +https://github.com/dmuellner/fastcluster/raw/master/docs/fastcluster.pdf). + +The “Yule” distance function changed in fastcluster version 1.2.0. This is +following a [change in SciPy 1.6.3]( +https://github.com/scipy/scipy/commit/3b22d1da98dc1b5f64bc944c21f398d4ba782bce). +It is recommended to use fastcluster version 1.1.x together with SciPy versions +before 1.6.3 and fastcluster 1.2.x with SciPy ≥1.6.3. + +The fastcluster package is considered stable and will undergo few changes +from now on. If some years from now there have not been any updates, this does +not necessarily mean that the package is unmaintained but maybe it just was +not necessary to correct anything. Of course, please still report potential +bugs and incompatibilities to daniel@danifold.net. You may also use +[my GitHub repository](https://github.com/dmuellner/fastcluster/) +for bug reports, pull requests etc. + +Note that [PyPI](https://pypi.org/project/fastcluster/) and [my GitHub +repository](https://github.com/dmuellner/fastcluster/) host the source code +for the Python interface only. The archive with both the R and the Python +interface is available on +[CRAN](https://CRAN.R-project.org/package=fastcluster) and the GitHub repository +[“cran/fastcluster”](https://github.com/cran/fastcluster). Even though I appear +as the author also of this second GitHub repository, this is just an automatic, +read-only mirror of the CRAN archive, so please do not attempt to report bugs or +contact me via this repository. + +Installation files for Windows are provided on [PyPI]( +https://pypi.org/project/fastcluster/#files) and on [Christoph Gohlke's web +page](http://www.lfd.uci.edu/~gohlke/pythonlibs/#fastcluster). + +Christoph Dalitz wrote a pure [C++ interface to fastcluster]( +https://lionel.kr.hs-niederrhein.de/~dalitz/data/hclust/). + +Reference: Daniel Müllner, *fastcluster: Fast Hierarchical, Agglomerative +Clustering Routines for R and Python*, Journal of Statistical Software, **53** +(2013), no. 9, 1–18, https://doi.org/10.18637/jss.v053.i09. + + + + +%package help +Summary: Development documents and examples for fastcluster +Provides: python3-fastcluster-doc +%description help + +This library provides Python functions for hierarchical clustering. It +generates hierarchical clusters from distance matrices or from vector data. + +This module is intended to replace the functions +``` + linkage, single, complete, average, weighted, centroid, median, ward +``` +in the module [`scipy.cluster.hierarchy`]( +https://docs.scipy.org/doc/scipy/reference/cluster.hierarchy.html) with the same +functionality but much faster algorithms. Moreover, the function +`linkage_vector` provides memory-efficient clustering for vector data. + +The interface is very similar to MATLAB's Statistics Toolbox API to make code +easier to port from MATLAB to Python/NumPy. The core implementation of this +library is in C++ for efficiency. + +**User manual:** [fastcluster.pdf]( +https://github.com/dmuellner/fastcluster/raw/master/docs/fastcluster.pdf). + +The “Yule” distance function changed in fastcluster version 1.2.0. This is +following a [change in SciPy 1.6.3]( +https://github.com/scipy/scipy/commit/3b22d1da98dc1b5f64bc944c21f398d4ba782bce). +It is recommended to use fastcluster version 1.1.x together with SciPy versions +before 1.6.3 and fastcluster 1.2.x with SciPy ≥1.6.3. + +The fastcluster package is considered stable and will undergo few changes +from now on. If some years from now there have not been any updates, this does +not necessarily mean that the package is unmaintained but maybe it just was +not necessary to correct anything. Of course, please still report potential +bugs and incompatibilities to daniel@danifold.net. You may also use +[my GitHub repository](https://github.com/dmuellner/fastcluster/) +for bug reports, pull requests etc. + +Note that [PyPI](https://pypi.org/project/fastcluster/) and [my GitHub +repository](https://github.com/dmuellner/fastcluster/) host the source code +for the Python interface only. The archive with both the R and the Python +interface is available on +[CRAN](https://CRAN.R-project.org/package=fastcluster) and the GitHub repository +[“cran/fastcluster”](https://github.com/cran/fastcluster). Even though I appear +as the author also of this second GitHub repository, this is just an automatic, +read-only mirror of the CRAN archive, so please do not attempt to report bugs or +contact me via this repository. + +Installation files for Windows are provided on [PyPI]( +https://pypi.org/project/fastcluster/#files) and on [Christoph Gohlke's web +page](http://www.lfd.uci.edu/~gohlke/pythonlibs/#fastcluster). + +Christoph Dalitz wrote a pure [C++ interface to fastcluster]( +https://lionel.kr.hs-niederrhein.de/~dalitz/data/hclust/). + +Reference: Daniel Müllner, *fastcluster: Fast Hierarchical, Agglomerative +Clustering Routines for R and Python*, Journal of Statistical Software, **53** +(2013), no. 9, 1–18, https://doi.org/10.18637/jss.v053.i09. + + + + +%prep +%autosetup -n fastcluster-1.2.6 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-fastcluster -f filelist.lst +%dir %{python3_sitearch}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Mon Apr 10 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.6-1 +- Package Spec generated @@ -0,0 +1 @@ +2f4a1777ef6ee668a24561cfda84b6f1 fastcluster-1.2.6.tar.gz |