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authorCoprDistGit <infra@openeuler.org>2023-04-11 10:51:14 +0000
committerCoprDistGit <infra@openeuler.org>2023-04-11 10:51:14 +0000
commit2c242eafffafda6908a2911821167f29213738c8 (patch)
tree796ec15a663b29f322ff8410e937405415b5defa
parentcf5d560805dafc3001bf272bd1ba580787263a47 (diff)
automatic import of python-fisherexact
-rw-r--r--.gitignore1
-rw-r--r--python-fisherexact.spec168
-rw-r--r--sources1
3 files changed, 170 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..51e19fa 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/FisherExact-1.4.2.tar.gz
diff --git a/python-fisherexact.spec b/python-fisherexact.spec
new file mode 100644
index 0000000..6d3a580
--- /dev/null
+++ b/python-fisherexact.spec
@@ -0,0 +1,168 @@
+%global _empty_manifest_terminate_build 0
+Name: python-FisherExact
+Version: 1.4.2
+Release: 1
+Summary: Fishe's Exact test for mxn contingency table
+License: GPL
+URL: https://github.com/maclandrol/FisherExact
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/6f/e9/a849764e3da0f166cd1e37c624fc74f918920c72feb72f351854cbfedd94/FisherExact-1.4.2.tar.gz
+BuildArch: noarch
+
+
+%description
+ table : array_like of ints
+ A 2x2 contingency table. Elements should be non-negative integers.
+ alternative : {'two-sided', 'less', 'greater'}, optional
+ Which alternative hypothesis to the null hypothesis the test uses.
+ Default is 'two-sided'. Only used in the 2 x 2 case (with the scipy function).
+ In every other case, the two-sided pval is returned.
+ mult : int
+ Specify the size of the workspace used in the network algorithm.
+ Only used for non-simulated p-values larger than 2 x 2 table.
+ You might want to increase this if the p-value failed
+ hybrid : bool
+ Only used for larger than 2 x 2 tables, in which cases it indicates
+ whether the exact probabilities (default) or a hybrid approximation
+ thereof should be computed.
+ midP : bool
+ Use this to enable mid-P correction. Could lead to slow computation.
+ This is not applicable for simulation p-values. `alternative` cannot
+ be used if you enable midpoint correction.
+ simulate_pval : bool
+ Indicate whether to compute p-values by Monte Carlo simulation,
+ in larger than 2 x 2 tables.
+ replicate : int
+ An integer specifying the number of replicates used in the Monte Carlo test.
+ workspace : int
+ An integer specifying the workspace size. Default value is 300.
+ attempt : int
+ Number of attempts to try, if the workspace size is not enough.
+ On each attempt, the workspace size is doubled.
+ seed : int
+ Random number to use as seed. If a seed isn't provided. 4 bytes will be read
+ from os.urandom. If this fail, getrandbits of the random module
+ (with 32 random bits) will be used. In the particular case where both failed,
+ the current time will be used
+
+%package -n python3-FisherExact
+Summary: Fishe's Exact test for mxn contingency table
+Provides: python-FisherExact
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-FisherExact
+ table : array_like of ints
+ A 2x2 contingency table. Elements should be non-negative integers.
+ alternative : {'two-sided', 'less', 'greater'}, optional
+ Which alternative hypothesis to the null hypothesis the test uses.
+ Default is 'two-sided'. Only used in the 2 x 2 case (with the scipy function).
+ In every other case, the two-sided pval is returned.
+ mult : int
+ Specify the size of the workspace used in the network algorithm.
+ Only used for non-simulated p-values larger than 2 x 2 table.
+ You might want to increase this if the p-value failed
+ hybrid : bool
+ Only used for larger than 2 x 2 tables, in which cases it indicates
+ whether the exact probabilities (default) or a hybrid approximation
+ thereof should be computed.
+ midP : bool
+ Use this to enable mid-P correction. Could lead to slow computation.
+ This is not applicable for simulation p-values. `alternative` cannot
+ be used if you enable midpoint correction.
+ simulate_pval : bool
+ Indicate whether to compute p-values by Monte Carlo simulation,
+ in larger than 2 x 2 tables.
+ replicate : int
+ An integer specifying the number of replicates used in the Monte Carlo test.
+ workspace : int
+ An integer specifying the workspace size. Default value is 300.
+ attempt : int
+ Number of attempts to try, if the workspace size is not enough.
+ On each attempt, the workspace size is doubled.
+ seed : int
+ Random number to use as seed. If a seed isn't provided. 4 bytes will be read
+ from os.urandom. If this fail, getrandbits of the random module
+ (with 32 random bits) will be used. In the particular case where both failed,
+ the current time will be used
+
+%package help
+Summary: Development documents and examples for FisherExact
+Provides: python3-FisherExact-doc
+%description help
+ table : array_like of ints
+ A 2x2 contingency table. Elements should be non-negative integers.
+ alternative : {'two-sided', 'less', 'greater'}, optional
+ Which alternative hypothesis to the null hypothesis the test uses.
+ Default is 'two-sided'. Only used in the 2 x 2 case (with the scipy function).
+ In every other case, the two-sided pval is returned.
+ mult : int
+ Specify the size of the workspace used in the network algorithm.
+ Only used for non-simulated p-values larger than 2 x 2 table.
+ You might want to increase this if the p-value failed
+ hybrid : bool
+ Only used for larger than 2 x 2 tables, in which cases it indicates
+ whether the exact probabilities (default) or a hybrid approximation
+ thereof should be computed.
+ midP : bool
+ Use this to enable mid-P correction. Could lead to slow computation.
+ This is not applicable for simulation p-values. `alternative` cannot
+ be used if you enable midpoint correction.
+ simulate_pval : bool
+ Indicate whether to compute p-values by Monte Carlo simulation,
+ in larger than 2 x 2 tables.
+ replicate : int
+ An integer specifying the number of replicates used in the Monte Carlo test.
+ workspace : int
+ An integer specifying the workspace size. Default value is 300.
+ attempt : int
+ Number of attempts to try, if the workspace size is not enough.
+ On each attempt, the workspace size is doubled.
+ seed : int
+ Random number to use as seed. If a seed isn't provided. 4 bytes will be read
+ from os.urandom. If this fail, getrandbits of the random module
+ (with 32 random bits) will be used. In the particular case where both failed,
+ the current time will be used
+
+%prep
+%autosetup -n FisherExact-1.4.2
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-FisherExact -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Tue Apr 11 2023 Python_Bot <Python_Bot@openeuler.org> - 1.4.2-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..652c000
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+76cc38df2a2b527dd549a65b171ac451 FisherExact-1.4.2.tar.gz