1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
|
%global _empty_manifest_terminate_build 0
Name: python-geonomics
Version: 1.3.9
Release: 1
Summary: A package for landscape genomic simulation
License: MIT License
URL: https://github.com/drewhart/geonomics
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/80/82/e545df016dfa7e1b900fe0091478c415642ddeca0577b6b8b9f341ae428a/geonomics-1.3.9.tar.gz
BuildArch: noarch
Requires: python3-pykrige
Requires: python3-nlmpy
%description
The following is a short list of highlights. For the full monty, please see
the `homepage <https://github.com/drewhart/geonomics>`_,
the `docs <https://geonomics.readthedocs.org>`_,
and the `original methods paper <PAPER_URL_HERE>`_.
- a model object, which serves as the primary user interface and which
contains all other model components
- a landscape object consisting of an arbitrary number of environmental
raster layers
- a community object consisting of an arbitrary number of species objects,
each consisting of an arbitrary number of individuals
- an optional genomic-architecture object, upon which individuals' genomes
are based
- spatialized logistic growth regulating local population densities
- the capability to model realistic movement and offspring dispersal
across conductance surfaces
- neutral and non-neutral evolution capabilities, with spatially contingent
selection
- demographic- and environmental-change capabilities
- the capability to run an arbitrary number of iterations of a model
- the capability to sample data and a variety of statistics at any desired
timesteps during a model run
- numerous visualization methods to aid in model design, exploration,
analysis, and presentation
%package -n python3-geonomics
Summary: A package for landscape genomic simulation
Provides: python-geonomics
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-geonomics
The following is a short list of highlights. For the full monty, please see
the `homepage <https://github.com/drewhart/geonomics>`_,
the `docs <https://geonomics.readthedocs.org>`_,
and the `original methods paper <PAPER_URL_HERE>`_.
- a model object, which serves as the primary user interface and which
contains all other model components
- a landscape object consisting of an arbitrary number of environmental
raster layers
- a community object consisting of an arbitrary number of species objects,
each consisting of an arbitrary number of individuals
- an optional genomic-architecture object, upon which individuals' genomes
are based
- spatialized logistic growth regulating local population densities
- the capability to model realistic movement and offspring dispersal
across conductance surfaces
- neutral and non-neutral evolution capabilities, with spatially contingent
selection
- demographic- and environmental-change capabilities
- the capability to run an arbitrary number of iterations of a model
- the capability to sample data and a variety of statistics at any desired
timesteps during a model run
- numerous visualization methods to aid in model design, exploration,
analysis, and presentation
%package help
Summary: Development documents and examples for geonomics
Provides: python3-geonomics-doc
%description help
The following is a short list of highlights. For the full monty, please see
the `homepage <https://github.com/drewhart/geonomics>`_,
the `docs <https://geonomics.readthedocs.org>`_,
and the `original methods paper <PAPER_URL_HERE>`_.
- a model object, which serves as the primary user interface and which
contains all other model components
- a landscape object consisting of an arbitrary number of environmental
raster layers
- a community object consisting of an arbitrary number of species objects,
each consisting of an arbitrary number of individuals
- an optional genomic-architecture object, upon which individuals' genomes
are based
- spatialized logistic growth regulating local population densities
- the capability to model realistic movement and offspring dispersal
across conductance surfaces
- neutral and non-neutral evolution capabilities, with spatially contingent
selection
- demographic- and environmental-change capabilities
- the capability to run an arbitrary number of iterations of a model
- the capability to sample data and a variety of statistics at any desired
timesteps during a model run
- numerous visualization methods to aid in model design, exploration,
analysis, and presentation
%prep
%autosetup -n geonomics-1.3.9
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-geonomics -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue May 30 2023 Python_Bot <Python_Bot@openeuler.org> - 1.3.9-1
- Package Spec generated
|