diff options
| -rw-r--r-- | .gitignore | 1 | ||||
| -rw-r--r-- | python-mimseq.spec | 81 | ||||
| -rw-r--r-- | sources | 1 |
3 files changed, 83 insertions, 0 deletions
@@ -0,0 +1 @@ +/mimseq-1.3.3.tar.gz diff --git a/python-mimseq.spec b/python-mimseq.spec new file mode 100644 index 0000000..0587fdb --- /dev/null +++ b/python-mimseq.spec @@ -0,0 +1,81 @@ +%global _empty_manifest_terminate_build 0 +Name: python-mimseq +Version: 1.3.3 +Release: 1 +Summary: Custom high-throughput tRNA sequencing alignment and quantification pipeline based on modification induced misincorporation cDNA synthesis. +License: GPLv3 +URL: https://github.com/nedialkova-lab/mim-tRNAseq +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/68/0b/14b1b0a310535bef623f276f80e7f863f1e1c32e39b945626749b3d479e3/mimseq-1.3.3.tar.gz +BuildArch: noarch + +Requires: python3-biopython +Requires: python3-pandas +Requires: python3-numpy +Requires: python3-pyfiglet +Requires: python3-pysam +Requires: python3-seaborn +Requires: python3-matplotlib +Requires: python3-pybedtools +Requires: python3-statsmodels + +%description + + +%package -n python3-mimseq +Summary: Custom high-throughput tRNA sequencing alignment and quantification pipeline based on modification induced misincorporation cDNA synthesis. +Provides: python-mimseq +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-mimseq + + +%package help +Summary: Development documents and examples for mimseq +Provides: python3-mimseq-doc +%description help + + +%prep +%autosetup -n mimseq-1.3.3 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-mimseq -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Mon May 15 2023 Python_Bot <Python_Bot@openeuler.org> - 1.3.3-1 +- Package Spec generated @@ -0,0 +1 @@ +efce15fc70b5e60120b778d45a1996fa mimseq-1.3.3.tar.gz |