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path: root/python-monai-weekly.spec
blob: 5954f851d7df872e9daa50c22fb8d74dd29117e9 (plain)
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%global _empty_manifest_terminate_build 0
Name:		python-monai-weekly
Version:	1.2.dev2318
Release:	1
Summary:	AI Toolkit for Healthcare Imaging
License:	Apache License 2.0
URL:		https://monai.io/
Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/a0/80/76a653b7776408041f2c15d7607c8ac8c93781e6806a3a0625c8b388664e/monai-weekly-1.2.dev2318.tar.gz
BuildArch:	noarch

Requires:	python3-torch
Requires:	python3-numpy
Requires:	python3-nibabel
Requires:	python3-ninja
Requires:	python3-scikit-image
Requires:	python3-pillow
Requires:	python3-tensorboard
Requires:	python3-gdown
Requires:	python3-pytorch-ignite
Requires:	python3-torchvision
Requires:	python3-itk
Requires:	python3-tqdm
Requires:	python3-lmdb
Requires:	python3-psutil
Requires:	python3-cucim
Requires:	python3-openslide-python
Requires:	python3-tifffile
Requires:	python3-imagecodecs
Requires:	python3-pandas
Requires:	python3-einops
Requires:	python3-transformers
Requires:	python3-mlflow
Requires:	python3-clearml
Requires:	python3-matplotlib
Requires:	python3-tensorboardX
Requires:	python3-pyyaml
Requires:	python3-fire
Requires:	python3-jsonschema
Requires:	python3-pynrrd
Requires:	python3-pydicom
Requires:	python3-h5py
Requires:	python3-nni
Requires:	python3-optuna
Requires:	python3-onnx
Requires:	python3-onnxruntime
Requires:	python3-cucim
Requires:	python3-einops
Requires:	python3-fire
Requires:	python3-gdown
Requires:	python3-h5py
Requires:	python3-pytorch-ignite
Requires:	python3-imagecodecs
Requires:	python3-itk
Requires:	python3-jsonschema
Requires:	python3-lmdb
Requires:	python3-matplotlib
Requires:	python3-mlflow
Requires:	python3-nibabel
Requires:	python3-ninja
Requires:	python3-nni
Requires:	python3-onnx
Requires:	python3-onnxruntime
Requires:	python3-openslide-python
Requires:	python3-optuna
Requires:	python3-pandas
Requires:	python3-pillow
Requires:	python3-psutil
Requires:	python3-pydicom
Requires:	python3-pynrrd
Requires:	python3-pyyaml
Requires:	python3-scikit-image
Requires:	python3-tensorboard
Requires:	python3-tensorboardX
Requires:	python3-tifffile
Requires:	python3-torchvision
Requires:	python3-tqdm
Requires:	python3-transformers

%description
<p align="center">
  <img src="https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/MONAI-logo-color.png" width="50%" alt='project-monai'>
</p>

**M**edical **O**pen **N**etwork for **AI**

![Supported Python versions](https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/python.svg)
[![License](https://img.shields.io/badge/license-Apache%202.0-green.svg)](https://opensource.org/licenses/Apache-2.0)
[![PyPI version](https://badge.fury.io/py/monai.svg)](https://badge.fury.io/py/monai)
[![docker](https://img.shields.io/badge/docker-pull-green.svg?logo=docker&logoColor=white)](https://hub.docker.com/r/projectmonai/monai)
[![conda](https://img.shields.io/conda/vn/conda-forge/monai?color=green)](https://anaconda.org/conda-forge/monai)

[![premerge](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml)
[![postmerge](https://img.shields.io/github/checks-status/project-monai/monai/dev?label=postmerge)](https://github.com/Project-MONAI/MONAI/actions?query=branch%3Adev)
[![docker](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml)
[![Documentation Status](https://readthedocs.org/projects/monai/badge/?version=latest)](https://docs.monai.io/en/latest/)
[![codecov](https://codecov.io/gh/Project-MONAI/MONAI/branch/dev/graph/badge.svg?token=6FTC7U1JJ4)](https://codecov.io/gh/Project-MONAI/MONAI)

MONAI is a [PyTorch](https://pytorch.org/)-based, [open-source](https://github.com/Project-MONAI/MONAI/blob/dev/LICENSE) framework for deep learning in healthcare imaging, part of [PyTorch Ecosystem](https://pytorch.org/ecosystem/).
Its ambitions are:
- developing a community of academic, industrial and clinical researchers collaborating on a common foundation;
- creating state-of-the-art, end-to-end training workflows for healthcare imaging;
- providing researchers with the optimized and standardized way to create and evaluate deep learning models.


## Features
> _Please see [the technical highlights](https://docs.monai.io/en/latest/highlights.html) and [What's New](https://docs.monai.io/en/latest/whatsnew.html) of the milestone releases._

- flexible pre-processing for multi-dimensional medical imaging data;
- compositional & portable APIs for ease of integration in existing workflows;
- domain-specific implementations for networks, losses, evaluation metrics and more;
- customizable design for varying user expertise;
- multi-GPU data parallelism support.


## Installation

To install [the current release](https://pypi.org/project/monai/), you can simply run:

```bash
pip install monai
```

Please refer to [the installation guide](https://docs.monai.io/en/latest/installation.html) for other installation options.

## Getting Started

[MedNIST demo](https://colab.research.google.com/drive/1wy8XUSnNWlhDNazFdvGBHLfdkGvOHBKe) and [MONAI for PyTorch Users](https://colab.research.google.com/drive/1boqy7ENpKrqaJoxFlbHIBnIODAs1Ih1T) are available on Colab.

Examples and notebook tutorials are located at [Project-MONAI/tutorials](https://github.com/Project-MONAI/tutorials).

Technical documentation is available at [docs.monai.io](https://docs.monai.io).

## Citation

If you have used MONAI in your research, please cite us! The citation can be exported from: https://arxiv.org/abs/2211.02701.

## Model Zoo
[The MONAI Model Zoo](https://github.com/Project-MONAI/model-zoo) is a place for researchers and data scientists to share the latest and great models from the community.
Utilizing [the MONAI Bundle format](https://docs.monai.io/en/latest/bundle_intro.html) makes it easy to [get started](https://github.com/Project-MONAI/tutorials/tree/main/model_zoo) building workflows with MONAI.

## Contributing
For guidance on making a contribution to MONAI, see the [contributing guidelines](https://github.com/Project-MONAI/MONAI/blob/dev/CONTRIBUTING.md).

## Community
Join the conversation on Twitter [@ProjectMONAI](https://twitter.com/ProjectMONAI) or join our [Slack channel](https://forms.gle/QTxJq3hFictp31UM9).

Ask and answer questions over on [MONAI's GitHub Discussions tab](https://github.com/Project-MONAI/MONAI/discussions).

## Links
- Website: https://monai.io/
- API documentation (milestone): https://docs.monai.io/
- API documentation (latest dev): https://docs.monai.io/en/latest/
- Code: https://github.com/Project-MONAI/MONAI
- Project tracker: https://github.com/Project-MONAI/MONAI/projects
- Issue tracker: https://github.com/Project-MONAI/MONAI/issues
- Wiki: https://github.com/Project-MONAI/MONAI/wiki
- Test status: https://github.com/Project-MONAI/MONAI/actions
- PyPI package: https://pypi.org/project/monai/
- conda-forge: https://anaconda.org/conda-forge/monai
- Weekly previews: https://pypi.org/project/monai-weekly/
- Docker Hub: https://hub.docker.com/r/projectmonai/monai


%package -n python3-monai-weekly
Summary:	AI Toolkit for Healthcare Imaging
Provides:	python-monai-weekly
BuildRequires:	python3-devel
BuildRequires:	python3-setuptools
BuildRequires:	python3-pip
%description -n python3-monai-weekly
<p align="center">
  <img src="https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/MONAI-logo-color.png" width="50%" alt='project-monai'>
</p>

**M**edical **O**pen **N**etwork for **AI**

![Supported Python versions](https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/python.svg)
[![License](https://img.shields.io/badge/license-Apache%202.0-green.svg)](https://opensource.org/licenses/Apache-2.0)
[![PyPI version](https://badge.fury.io/py/monai.svg)](https://badge.fury.io/py/monai)
[![docker](https://img.shields.io/badge/docker-pull-green.svg?logo=docker&logoColor=white)](https://hub.docker.com/r/projectmonai/monai)
[![conda](https://img.shields.io/conda/vn/conda-forge/monai?color=green)](https://anaconda.org/conda-forge/monai)

[![premerge](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml)
[![postmerge](https://img.shields.io/github/checks-status/project-monai/monai/dev?label=postmerge)](https://github.com/Project-MONAI/MONAI/actions?query=branch%3Adev)
[![docker](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml)
[![Documentation Status](https://readthedocs.org/projects/monai/badge/?version=latest)](https://docs.monai.io/en/latest/)
[![codecov](https://codecov.io/gh/Project-MONAI/MONAI/branch/dev/graph/badge.svg?token=6FTC7U1JJ4)](https://codecov.io/gh/Project-MONAI/MONAI)

MONAI is a [PyTorch](https://pytorch.org/)-based, [open-source](https://github.com/Project-MONAI/MONAI/blob/dev/LICENSE) framework for deep learning in healthcare imaging, part of [PyTorch Ecosystem](https://pytorch.org/ecosystem/).
Its ambitions are:
- developing a community of academic, industrial and clinical researchers collaborating on a common foundation;
- creating state-of-the-art, end-to-end training workflows for healthcare imaging;
- providing researchers with the optimized and standardized way to create and evaluate deep learning models.


## Features
> _Please see [the technical highlights](https://docs.monai.io/en/latest/highlights.html) and [What's New](https://docs.monai.io/en/latest/whatsnew.html) of the milestone releases._

- flexible pre-processing for multi-dimensional medical imaging data;
- compositional & portable APIs for ease of integration in existing workflows;
- domain-specific implementations for networks, losses, evaluation metrics and more;
- customizable design for varying user expertise;
- multi-GPU data parallelism support.


## Installation

To install [the current release](https://pypi.org/project/monai/), you can simply run:

```bash
pip install monai
```

Please refer to [the installation guide](https://docs.monai.io/en/latest/installation.html) for other installation options.

## Getting Started

[MedNIST demo](https://colab.research.google.com/drive/1wy8XUSnNWlhDNazFdvGBHLfdkGvOHBKe) and [MONAI for PyTorch Users](https://colab.research.google.com/drive/1boqy7ENpKrqaJoxFlbHIBnIODAs1Ih1T) are available on Colab.

Examples and notebook tutorials are located at [Project-MONAI/tutorials](https://github.com/Project-MONAI/tutorials).

Technical documentation is available at [docs.monai.io](https://docs.monai.io).

## Citation

If you have used MONAI in your research, please cite us! The citation can be exported from: https://arxiv.org/abs/2211.02701.

## Model Zoo
[The MONAI Model Zoo](https://github.com/Project-MONAI/model-zoo) is a place for researchers and data scientists to share the latest and great models from the community.
Utilizing [the MONAI Bundle format](https://docs.monai.io/en/latest/bundle_intro.html) makes it easy to [get started](https://github.com/Project-MONAI/tutorials/tree/main/model_zoo) building workflows with MONAI.

## Contributing
For guidance on making a contribution to MONAI, see the [contributing guidelines](https://github.com/Project-MONAI/MONAI/blob/dev/CONTRIBUTING.md).

## Community
Join the conversation on Twitter [@ProjectMONAI](https://twitter.com/ProjectMONAI) or join our [Slack channel](https://forms.gle/QTxJq3hFictp31UM9).

Ask and answer questions over on [MONAI's GitHub Discussions tab](https://github.com/Project-MONAI/MONAI/discussions).

## Links
- Website: https://monai.io/
- API documentation (milestone): https://docs.monai.io/
- API documentation (latest dev): https://docs.monai.io/en/latest/
- Code: https://github.com/Project-MONAI/MONAI
- Project tracker: https://github.com/Project-MONAI/MONAI/projects
- Issue tracker: https://github.com/Project-MONAI/MONAI/issues
- Wiki: https://github.com/Project-MONAI/MONAI/wiki
- Test status: https://github.com/Project-MONAI/MONAI/actions
- PyPI package: https://pypi.org/project/monai/
- conda-forge: https://anaconda.org/conda-forge/monai
- Weekly previews: https://pypi.org/project/monai-weekly/
- Docker Hub: https://hub.docker.com/r/projectmonai/monai


%package help
Summary:	Development documents and examples for monai-weekly
Provides:	python3-monai-weekly-doc
%description help
<p align="center">
  <img src="https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/MONAI-logo-color.png" width="50%" alt='project-monai'>
</p>

**M**edical **O**pen **N**etwork for **AI**

![Supported Python versions](https://raw.githubusercontent.com/Project-MONAI/MONAI/dev/docs/images/python.svg)
[![License](https://img.shields.io/badge/license-Apache%202.0-green.svg)](https://opensource.org/licenses/Apache-2.0)
[![PyPI version](https://badge.fury.io/py/monai.svg)](https://badge.fury.io/py/monai)
[![docker](https://img.shields.io/badge/docker-pull-green.svg?logo=docker&logoColor=white)](https://hub.docker.com/r/projectmonai/monai)
[![conda](https://img.shields.io/conda/vn/conda-forge/monai?color=green)](https://anaconda.org/conda-forge/monai)

[![premerge](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/pythonapp.yml)
[![postmerge](https://img.shields.io/github/checks-status/project-monai/monai/dev?label=postmerge)](https://github.com/Project-MONAI/MONAI/actions?query=branch%3Adev)
[![docker](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml/badge.svg?branch=dev)](https://github.com/Project-MONAI/MONAI/actions/workflows/docker.yml)
[![Documentation Status](https://readthedocs.org/projects/monai/badge/?version=latest)](https://docs.monai.io/en/latest/)
[![codecov](https://codecov.io/gh/Project-MONAI/MONAI/branch/dev/graph/badge.svg?token=6FTC7U1JJ4)](https://codecov.io/gh/Project-MONAI/MONAI)

MONAI is a [PyTorch](https://pytorch.org/)-based, [open-source](https://github.com/Project-MONAI/MONAI/blob/dev/LICENSE) framework for deep learning in healthcare imaging, part of [PyTorch Ecosystem](https://pytorch.org/ecosystem/).
Its ambitions are:
- developing a community of academic, industrial and clinical researchers collaborating on a common foundation;
- creating state-of-the-art, end-to-end training workflows for healthcare imaging;
- providing researchers with the optimized and standardized way to create and evaluate deep learning models.


## Features
> _Please see [the technical highlights](https://docs.monai.io/en/latest/highlights.html) and [What's New](https://docs.monai.io/en/latest/whatsnew.html) of the milestone releases._

- flexible pre-processing for multi-dimensional medical imaging data;
- compositional & portable APIs for ease of integration in existing workflows;
- domain-specific implementations for networks, losses, evaluation metrics and more;
- customizable design for varying user expertise;
- multi-GPU data parallelism support.


## Installation

To install [the current release](https://pypi.org/project/monai/), you can simply run:

```bash
pip install monai
```

Please refer to [the installation guide](https://docs.monai.io/en/latest/installation.html) for other installation options.

## Getting Started

[MedNIST demo](https://colab.research.google.com/drive/1wy8XUSnNWlhDNazFdvGBHLfdkGvOHBKe) and [MONAI for PyTorch Users](https://colab.research.google.com/drive/1boqy7ENpKrqaJoxFlbHIBnIODAs1Ih1T) are available on Colab.

Examples and notebook tutorials are located at [Project-MONAI/tutorials](https://github.com/Project-MONAI/tutorials).

Technical documentation is available at [docs.monai.io](https://docs.monai.io).

## Citation

If you have used MONAI in your research, please cite us! The citation can be exported from: https://arxiv.org/abs/2211.02701.

## Model Zoo
[The MONAI Model Zoo](https://github.com/Project-MONAI/model-zoo) is a place for researchers and data scientists to share the latest and great models from the community.
Utilizing [the MONAI Bundle format](https://docs.monai.io/en/latest/bundle_intro.html) makes it easy to [get started](https://github.com/Project-MONAI/tutorials/tree/main/model_zoo) building workflows with MONAI.

## Contributing
For guidance on making a contribution to MONAI, see the [contributing guidelines](https://github.com/Project-MONAI/MONAI/blob/dev/CONTRIBUTING.md).

## Community
Join the conversation on Twitter [@ProjectMONAI](https://twitter.com/ProjectMONAI) or join our [Slack channel](https://forms.gle/QTxJq3hFictp31UM9).

Ask and answer questions over on [MONAI's GitHub Discussions tab](https://github.com/Project-MONAI/MONAI/discussions).

## Links
- Website: https://monai.io/
- API documentation (milestone): https://docs.monai.io/
- API documentation (latest dev): https://docs.monai.io/en/latest/
- Code: https://github.com/Project-MONAI/MONAI
- Project tracker: https://github.com/Project-MONAI/MONAI/projects
- Issue tracker: https://github.com/Project-MONAI/MONAI/issues
- Wiki: https://github.com/Project-MONAI/MONAI/wiki
- Test status: https://github.com/Project-MONAI/MONAI/actions
- PyPI package: https://pypi.org/project/monai/
- conda-forge: https://anaconda.org/conda-forge/monai
- Weekly previews: https://pypi.org/project/monai-weekly/
- Docker Hub: https://hub.docker.com/r/projectmonai/monai


%prep
%autosetup -n monai-weekly-1.2.dev2318

%build
%py3_build

%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .

%files -n python3-monai-weekly -f filelist.lst
%dir %{python3_sitelib}/*

%files help -f doclist.lst
%{_docdir}/*

%changelog
* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.dev2318-1
- Package Spec generated