automatic import of python-mycotools

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+/mycotools-0.27.36.tar.gz
diff --git a/python-mycotools.spec b/python-mycotools.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-mycotools
+Version:	0.27.36
+Release:	1
+Summary:	A compilation of bioinformatic and computation biology inspired python tools
+License:	GNU Lesser General Public License v3 or later (LGPLv3+)
+URL:		https://gitlab.com/xonq/mycotools/mycotools
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/97/9e/8fde0cbb9cedd95e9d1b89137708f36fc9ea8f5f631bf5485637c952305b/mycotools-0.27.36.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-biopython
+Requires:	python3-pandas
+Requires:	python3-requests
+Requires:	python3-scipy
+Requires:	python3-openpyxl
+Requires:	python3-tqdm
+
+%description
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/pictogo.white.png"
+    >
+</p>
+Now alpha support for prokaryotes too!
+
+<br /><br />
+
+# NOTE
+While extensive alpha testing has been conducted, this software is in a beta state, and errors are expected. Kindly report these issues and remain patient for fixes - if you can find the bug, even better! This software will have longterm maintenance, although my focus is on my own research.
+
+Cheers,
+Zachary Konkel
+
+# PURPOSE
+Bring broadscale comparative genomics to the masses. 
+
+Mycotools is a compilation of computational biology tools and database [MycotoolsDB](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/MTDB.md) software that facilitate large-scale prokaryote and fungal comparative genomics. MycotoolsDB locally assimilates all NCBI and MycoCosm (Joint Genome Institute) genomes into a database schema with uniform file curation, scalability, and automation as guiding principles. 
+
+- Installation is as simple as `updateDB.py --init <DIR>`. No more limited and
+  incomplete databases.
+- `updateDB.py --update` brings the database to the current date. No more
+  database obsolecence in the wake of accelerating genome availability.
+- The MycotoolsDB (MTDB) uniformly curates the numerous notorious iterations of
+  the `gff`, allowing for reliable analyses and format expectations from
+  multiple eras.
+- The `.mtdb` database format enables swift transitions from analyses with datasets of 100,000s genomes to as few as a lineage of interest. No more scrambling to acquire files for an analysis.
+
+Mycotools is currently available as a beta subset of the full suite, excluding the database assimilation tools. MycotoolsDB is currently restricted to Ohio Supercomputer Center - if you are interested in early access, please email `konkelzach@protonmail.com`.
+
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/mtdb.png"
+    >
+</p>
+
+<br />
+
+By integrating with the curated MycotoolsDB, Mycotools aids routine-complex tasks like retrieving `gff` or `fasta` accessions; running and compiling `fasta`s of MycotoolsDB BLAST/hmmsearches; biology-based database manipulation tools; automated phylogenetic analysis pipelines from blast to Pfam extraction to tree prediction, etc etc. Mycotools includes sets of utilities that also enable easy acquisition of batches of sequence data using `ncbiDwnld.py` and `jgiDwnld.py`.
+
+<br />
+
+# USAGE
+Check out [README.md](https://gitlab.com/xonq/mycotools/-/tree/master/mycotools) for install and the [USAGE.md](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/USAGE.md) for a guide. 
+
+<br />
+
+# CITING
+If Mycotools contribute to your analysis, please cite this git repository (gitlab.com/xonq/mycotools) and mention the Mycotools version in line.
+
+<img align="right" src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/ablogo.png">
+
+<br /><br /><br /><br /><br /><br /><br /><br /><br /><br /><br />
+
+
+%package -n python3-mycotools
+Summary:	A compilation of bioinformatic and computation biology inspired python tools
+Provides:	python-mycotools
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-mycotools
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/pictogo.white.png"
+    >
+</p>
+Now alpha support for prokaryotes too!
+
+<br /><br />
+
+# NOTE
+While extensive alpha testing has been conducted, this software is in a beta state, and errors are expected. Kindly report these issues and remain patient for fixes - if you can find the bug, even better! This software will have longterm maintenance, although my focus is on my own research.
+
+Cheers,
+Zachary Konkel
+
+# PURPOSE
+Bring broadscale comparative genomics to the masses. 
+
+Mycotools is a compilation of computational biology tools and database [MycotoolsDB](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/MTDB.md) software that facilitate large-scale prokaryote and fungal comparative genomics. MycotoolsDB locally assimilates all NCBI and MycoCosm (Joint Genome Institute) genomes into a database schema with uniform file curation, scalability, and automation as guiding principles. 
+
+- Installation is as simple as `updateDB.py --init <DIR>`. No more limited and
+  incomplete databases.
+- `updateDB.py --update` brings the database to the current date. No more
+  database obsolecence in the wake of accelerating genome availability.
+- The MycotoolsDB (MTDB) uniformly curates the numerous notorious iterations of
+  the `gff`, allowing for reliable analyses and format expectations from
+  multiple eras.
+- The `.mtdb` database format enables swift transitions from analyses with datasets of 100,000s genomes to as few as a lineage of interest. No more scrambling to acquire files for an analysis.
+
+Mycotools is currently available as a beta subset of the full suite, excluding the database assimilation tools. MycotoolsDB is currently restricted to Ohio Supercomputer Center - if you are interested in early access, please email `konkelzach@protonmail.com`.
+
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/mtdb.png"
+    >
+</p>
+
+<br />
+
+By integrating with the curated MycotoolsDB, Mycotools aids routine-complex tasks like retrieving `gff` or `fasta` accessions; running and compiling `fasta`s of MycotoolsDB BLAST/hmmsearches; biology-based database manipulation tools; automated phylogenetic analysis pipelines from blast to Pfam extraction to tree prediction, etc etc. Mycotools includes sets of utilities that also enable easy acquisition of batches of sequence data using `ncbiDwnld.py` and `jgiDwnld.py`.
+
+<br />
+
+# USAGE
+Check out [README.md](https://gitlab.com/xonq/mycotools/-/tree/master/mycotools) for install and the [USAGE.md](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/USAGE.md) for a guide. 
+
+<br />
+
+# CITING
+If Mycotools contribute to your analysis, please cite this git repository (gitlab.com/xonq/mycotools) and mention the Mycotools version in line.
+
+<img align="right" src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/ablogo.png">
+
+<br /><br /><br /><br /><br /><br /><br /><br /><br /><br /><br />
+
+
+%package help
+Summary:	Development documents and examples for mycotools
+Provides:	python3-mycotools-doc
+%description help
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/pictogo.white.png"
+    >
+</p>
+Now alpha support for prokaryotes too!
+
+<br /><br />
+
+# NOTE
+While extensive alpha testing has been conducted, this software is in a beta state, and errors are expected. Kindly report these issues and remain patient for fixes - if you can find the bug, even better! This software will have longterm maintenance, although my focus is on my own research.
+
+Cheers,
+Zachary Konkel
+
+# PURPOSE
+Bring broadscale comparative genomics to the masses. 
+
+Mycotools is a compilation of computational biology tools and database [MycotoolsDB](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/MTDB.md) software that facilitate large-scale prokaryote and fungal comparative genomics. MycotoolsDB locally assimilates all NCBI and MycoCosm (Joint Genome Institute) genomes into a database schema with uniform file curation, scalability, and automation as guiding principles. 
+
+- Installation is as simple as `updateDB.py --init <DIR>`. No more limited and
+  incomplete databases.
+- `updateDB.py --update` brings the database to the current date. No more
+  database obsolecence in the wake of accelerating genome availability.
+- The MycotoolsDB (MTDB) uniformly curates the numerous notorious iterations of
+  the `gff`, allowing for reliable analyses and format expectations from
+  multiple eras.
+- The `.mtdb` database format enables swift transitions from analyses with datasets of 100,000s genomes to as few as a lineage of interest. No more scrambling to acquire files for an analysis.
+
+Mycotools is currently available as a beta subset of the full suite, excluding the database assimilation tools. MycotoolsDB is currently restricted to Ohio Supercomputer Center - if you are interested in early access, please email `konkelzach@protonmail.com`.
+
+<p align="center">
+    <img
+        src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/mtdb.png"
+    >
+</p>
+
+<br />
+
+By integrating with the curated MycotoolsDB, Mycotools aids routine-complex tasks like retrieving `gff` or `fasta` accessions; running and compiling `fasta`s of MycotoolsDB BLAST/hmmsearches; biology-based database manipulation tools; automated phylogenetic analysis pipelines from blast to Pfam extraction to tree prediction, etc etc. Mycotools includes sets of utilities that also enable easy acquisition of batches of sequence data using `ncbiDwnld.py` and `jgiDwnld.py`.
+
+<br />
+
+# USAGE
+Check out [README.md](https://gitlab.com/xonq/mycotools/-/tree/master/mycotools) for install and the [USAGE.md](https://gitlab.com/xonq/mycotools/-/blob/master/mycotools/USAGE.md) for a guide. 
+
+<br />
+
+# CITING
+If Mycotools contribute to your analysis, please cite this git repository (gitlab.com/xonq/mycotools) and mention the Mycotools version in line.
+
+<img align="right" src="https://gitlab.com/xonq/mycotools/-/raw/master/misc/ablogo.png">
+
+<br /><br /><br /><br /><br /><br /><br /><br /><br /><br /><br />
+
+
+%prep
+%autosetup -n mycotools-0.27.36
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-mycotools -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Wed May 10 2023 Python_Bot <Python_Bot@openeuler.org> - 0.27.36-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..8b0e195
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+8dbda5591f24bdcf9565090972fef177  mycotools-0.27.36.tar.gz