summaryrefslogtreecommitdiff
path: root/python-napari-imaris-loader.spec
blob: 7dd5517a323f0338c34f76d1c40076a2c328bb1f (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
%global _empty_manifest_terminate_build 0
Name:		python-napari-imaris-loader
Version:	0.1.8
Release:	1
Summary:	Napari plugin for loading Bitplane imaris files '.ims'
License:	BSD-3-Clause
URL:		https://github.com/AlanMWatson/napari-imaris-loader
Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/b9/da/93b4b1c29a58b23e3a640781db8d0a0f4951ff7eecae27cb96c214c170ee/napari-imaris-loader-0.1.8.tar.gz
BuildArch:	noarch

Requires:	python3-napari[all]
Requires:	python3-napari-plugin-engine
Requires:	python3-imaris-ims-file-reader
Requires:	python3-numpy
Requires:	python3-h5py
Requires:	python3-dask

%description
This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template.
<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started
and review the napari docs for plugin developers:
https://napari.org/docs/plugins/index.html
-->
## Installation
You can install `napari-imaris-loader` via [pip]:
    pip install napari-imaris-loader
## Change Log:
##### <u>v0.1.2:</u>
**Fixed:** Issue where .ims files containing a single color 2D image would not open.
**Fixed:** Issue where using the widget to change resolutions while in 3D rendering would cause a crash.  Now the viewer is automatically forced into 2D rendering mode when the widget is used.
**Dependency change:** The loader is now dependent in a separate package for loading IMS files.  https://pypi.org/project/imaris-ims-file-reader/
**v0.1.3:**
Documentation
**v0.1.4:**
Add napari to install requirements for plugin compatibility
**v0.1.5:**
Changes to napari:
- now requires napari[all] upon install.
- requires >=v0.1.5 of imaris-ims-file-reader
**v0.1.6:**
- Fix issue #7 where contrastLimits possibly unbound in reader
**v0.1.7:**
- For squeeze_output=False when opening .ims file for Napari compatibility
**v0.1.8:**
- Add automatic determination of contrast_limits
- Fix bug in squeeze_output
## Contributing
Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.
## License
Distributed under the terms of the [BSD-3] license,
"napari-imaris-loader" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[file an issue]: https://github.com/AlanMWatson/napari-imaris-loader/issues
[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/

%package -n python3-napari-imaris-loader
Summary:	Napari plugin for loading Bitplane imaris files '.ims'
Provides:	python-napari-imaris-loader
BuildRequires:	python3-devel
BuildRequires:	python3-setuptools
BuildRequires:	python3-pip
%description -n python3-napari-imaris-loader
This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template.
<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started
and review the napari docs for plugin developers:
https://napari.org/docs/plugins/index.html
-->
## Installation
You can install `napari-imaris-loader` via [pip]:
    pip install napari-imaris-loader
## Change Log:
##### <u>v0.1.2:</u>
**Fixed:** Issue where .ims files containing a single color 2D image would not open.
**Fixed:** Issue where using the widget to change resolutions while in 3D rendering would cause a crash.  Now the viewer is automatically forced into 2D rendering mode when the widget is used.
**Dependency change:** The loader is now dependent in a separate package for loading IMS files.  https://pypi.org/project/imaris-ims-file-reader/
**v0.1.3:**
Documentation
**v0.1.4:**
Add napari to install requirements for plugin compatibility
**v0.1.5:**
Changes to napari:
- now requires napari[all] upon install.
- requires >=v0.1.5 of imaris-ims-file-reader
**v0.1.6:**
- Fix issue #7 where contrastLimits possibly unbound in reader
**v0.1.7:**
- For squeeze_output=False when opening .ims file for Napari compatibility
**v0.1.8:**
- Add automatic determination of contrast_limits
- Fix bug in squeeze_output
## Contributing
Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.
## License
Distributed under the terms of the [BSD-3] license,
"napari-imaris-loader" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[file an issue]: https://github.com/AlanMWatson/napari-imaris-loader/issues
[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/

%package help
Summary:	Development documents and examples for napari-imaris-loader
Provides:	python3-napari-imaris-loader-doc
%description help
This [napari] plugin was generated with [Cookiecutter] using with [@napari]'s [cookiecutter-napari-plugin] template.
<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started
and review the napari docs for plugin developers:
https://napari.org/docs/plugins/index.html
-->
## Installation
You can install `napari-imaris-loader` via [pip]:
    pip install napari-imaris-loader
## Change Log:
##### <u>v0.1.2:</u>
**Fixed:** Issue where .ims files containing a single color 2D image would not open.
**Fixed:** Issue where using the widget to change resolutions while in 3D rendering would cause a crash.  Now the viewer is automatically forced into 2D rendering mode when the widget is used.
**Dependency change:** The loader is now dependent in a separate package for loading IMS files.  https://pypi.org/project/imaris-ims-file-reader/
**v0.1.3:**
Documentation
**v0.1.4:**
Add napari to install requirements for plugin compatibility
**v0.1.5:**
Changes to napari:
- now requires napari[all] upon install.
- requires >=v0.1.5 of imaris-ims-file-reader
**v0.1.6:**
- Fix issue #7 where contrastLimits possibly unbound in reader
**v0.1.7:**
- For squeeze_output=False when opening .ims file for Napari compatibility
**v0.1.8:**
- Add automatic determination of contrast_limits
- Fix bug in squeeze_output
## Contributing
Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.
## License
Distributed under the terms of the [BSD-3] license,
"napari-imaris-loader" is free and open source software
## Issues
If you encounter any problems, please [file an issue] along with a detailed description.
[napari]: https://github.com/napari/napari
[Cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[MIT]: http://opensource.org/licenses/MIT
[BSD-3]: http://opensource.org/licenses/BSD-3-Clause
[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[file an issue]: https://github.com/AlanMWatson/napari-imaris-loader/issues
[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[PyPI]: https://pypi.org/

%prep
%autosetup -n napari-imaris-loader-0.1.8

%build
%py3_build

%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .

%files -n python3-napari-imaris-loader -f filelist.lst
%dir %{python3_sitelib}/*

%files help -f doclist.lst
%{_docdir}/*

%changelog
* Tue May 30 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.8-1
- Package Spec generated