automatic import of python-ontobio

3 files changed, 122 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
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+/ontobio-2.8.4.tar.gz
diff --git a/python-ontobio.spec b/python-ontobio.spec
new file mode 100644
index 0000000..d67ca7d
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+%global _empty_manifest_terminate_build 0
+Name:		python-ontobio
+Version:	2.8.4
+Release:	1
+Summary:	Library for working with OBO Library Ontologies and associations
+License:	BSD
+URL:		https://github.com/biolink/ontobio
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/8e/b6/6d5441864c27ed38c5e6c51fa77515be74d5054ca89bf2d66df0ee12415e/ontobio-2.8.4.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-marshmallow
+Requires:	python3-jsobject
+Requires:	python3-prefixcommons
+Requires:	python3-requests
+Requires:	python3-pip
+Requires:	python3-wheel
+Requires:	python3-pysolr
+Requires:	python3-networkx
+Requires:	python3-matplotlib
+Requires:	python3-SPARQLWrapper
+Requires:	python3-pandas
+Requires:	python3-scipy
+Requires:	python3-twine
+Requires:	python3-jsonpickle
+Requires:	python3-jsonpath-rw
+Requires:	python3-PyShEx
+Requires:	python3-pytest
+Requires:	python3-pytest-logging
+Requires:	python3-pydotplus
+Requires:	python3-plotly
+Requires:	python3-pyyaml
+Requires:	python3-yamldown
+Requires:	python3-click
+Requires:	python3-dataclasses
+Requires:	python3-diskcache
+Requires:	python3-bidict
+Requires:	python3-dateutil
+Requires:	python3-chardet
+Requires:	python3-dacite
+Requires:	python3-pyparsing
+Requires:	python3-pysolr
+Requires:	python3-plotly
+Requires:	python3-pytest
+
+%description
+This module provides objects and utility methods for working with
+ontologies and associations of entities (genes, variants, etc) to
+ontology classes.
+The ontologies and associations can either be local files or provided by
+remote services (currently the OntoBee SPARQL service for ontologies and
+a Monarch or GO Golr service for associations).
+
+%package -n python3-ontobio
+Summary:	Library for working with OBO Library Ontologies and associations
+Provides:	python-ontobio
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-ontobio
+This module provides objects and utility methods for working with
+ontologies and associations of entities (genes, variants, etc) to
+ontology classes.
+The ontologies and associations can either be local files or provided by
+remote services (currently the OntoBee SPARQL service for ontologies and
+a Monarch or GO Golr service for associations).
+
+%package help
+Summary:	Development documents and examples for ontobio
+Provides:	python3-ontobio-doc
+%description help
+This module provides objects and utility methods for working with
+ontologies and associations of entities (genes, variants, etc) to
+ontology classes.
+The ontologies and associations can either be local files or provided by
+remote services (currently the OntoBee SPARQL service for ontologies and
+a Monarch or GO Golr service for associations).
+
+%prep
+%autosetup -n ontobio-2.8.4
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-ontobio -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Wed Apr 12 2023 Python_Bot <Python_Bot@openeuler.org> - 2.8.4-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..14f3d86
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+b975d2aba8b5b067fa9f0440f2efdfc8  ontobio-2.8.4.tar.gz