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Diffstat (limited to 'python-pdm-utils.spec')
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diff --git a/python-pdm-utils.spec b/python-pdm-utils.spec new file mode 100644 index 0000000..3b0fb19 --- /dev/null +++ b/python-pdm-utils.spec @@ -0,0 +1,138 @@ +%global _empty_manifest_terminate_build 0 +Name: python-pdm-utils +Version: 0.9.26 +Release: 1 +Summary: MySQL phage genomics database management utilities +License: GNU General Public License v3 (GPLv3) +URL: https://github.com/SEA-PHAGES/pdm_utils +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/98/7b/72f87b44330a47df3b67de63162d9a8bf54786dc82c917a88a08070c4f34/pdm_utils-0.9.26.tar.gz +BuildArch: noarch + +Requires: python3-biopython +Requires: python3-networkx +Requires: python3-paramiko +Requires: python3-phammseqs +Requires: python3-pymysql +Requires: python3-pyyaml +Requires: python3-sqlalchemy +Requires: python3-tabulate +Requires: python3-urllib3 + +%description +# README # + +### Purpose: ### + +* The pdm_utils repository provides the source code for pdm_utils Python package, developed in the SEA-PHAGES program to create, update, and maintain MySQL phage genomics databases. + +The source code is available on GitHub at https://github.com/SEA-PHAGES/pdm_utils/. + +The user guide for the package is available on ReadTheDocs at https://pdm-utils.readthedocs.io/en/latest/. + +The pdm_utils Python package is available on PyPI at https://pypi.org/project/pdm-utils/. + +### Contribution guidelines: ### + +* Please contact us if you have any contributions or suggestions. Details about how to contribute can be found on the user guide. + +### Developers: ### + +* Travis Mavrich (trm53@pitt.edu) and Christian Gauthier (christian.gauthier@pitt.edu). + + +%package -n python3-pdm-utils +Summary: MySQL phage genomics database management utilities +Provides: python-pdm-utils +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-pdm-utils +# README # + +### Purpose: ### + +* The pdm_utils repository provides the source code for pdm_utils Python package, developed in the SEA-PHAGES program to create, update, and maintain MySQL phage genomics databases. + +The source code is available on GitHub at https://github.com/SEA-PHAGES/pdm_utils/. + +The user guide for the package is available on ReadTheDocs at https://pdm-utils.readthedocs.io/en/latest/. + +The pdm_utils Python package is available on PyPI at https://pypi.org/project/pdm-utils/. + +### Contribution guidelines: ### + +* Please contact us if you have any contributions or suggestions. Details about how to contribute can be found on the user guide. + +### Developers: ### + +* Travis Mavrich (trm53@pitt.edu) and Christian Gauthier (christian.gauthier@pitt.edu). + + +%package help +Summary: Development documents and examples for pdm-utils +Provides: python3-pdm-utils-doc +%description help +# README # + +### Purpose: ### + +* The pdm_utils repository provides the source code for pdm_utils Python package, developed in the SEA-PHAGES program to create, update, and maintain MySQL phage genomics databases. + +The source code is available on GitHub at https://github.com/SEA-PHAGES/pdm_utils/. + +The user guide for the package is available on ReadTheDocs at https://pdm-utils.readthedocs.io/en/latest/. + +The pdm_utils Python package is available on PyPI at https://pypi.org/project/pdm-utils/. + +### Contribution guidelines: ### + +* Please contact us if you have any contributions or suggestions. Details about how to contribute can be found on the user guide. + +### Developers: ### + +* Travis Mavrich (trm53@pitt.edu) and Christian Gauthier (christian.gauthier@pitt.edu). + + +%prep +%autosetup -n pdm-utils-0.9.26 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-pdm-utils -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Mon May 15 2023 Python_Bot <Python_Bot@openeuler.org> - 0.9.26-1 +- Package Spec generated |