automatic import of python-pyensembl

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+/pyensembl-2.2.8.tar.gz
diff --git a/python-pyensembl.spec b/python-pyensembl.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-pyensembl
+Version:	2.2.8
+Release:	1
+Summary:	Python interface to ensembl reference genome metadata
+License:	http://www.apache.org/licenses/LICENSE-2.0.html
+URL:		https://github.com/openvax/pyensembl
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/03/f6/e1c92ecebfda950d1fc15c73a83e2474330b62e9a82a3927e910bea801fd/pyensembl-2.2.8.tar.gz
+BuildArch:	noarch
+
+
+%description
+PyEnsembl is a Python interface to [Ensembl](http://www.ensembl.org) reference genome metadata such as exons and transcripts. PyEnsembl downloads [GTF](https://en.wikipedia.org/wiki/Gene_transfer_format) and [FASTA](https://en.wikipedia.org/wiki/FASTA_format) files from the [Ensembl FTP server](ftp://ftp.ensembl.org) and loads them into a local database. PyEnsembl can also work with custom reference data specified using user-supplied GTF and FASTA files. 
+# Example Usage
+```python
+from pyensembl import EnsemblRelease
+# release 77 uses human reference genome GRCh38
+data = EnsemblRelease(77)
+# will return ['HLA-A']
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+# get all exons associated with HLA-A
+exon_ids  = data.exon_ids_of_gene_name('HLA-A')
+```
+# Installation
+You can install PyEnsembl using [pip](https://pip.pypa.io/en/latest/quickstart.html):
+```sh
+pip install pyensembl
+```
+This should also install any required packages such as [datacache](https://github.com/openvax/datacache).
+Before using PyEnsembl, run the following command to download and install
+Ensembl data:
+```
+pyensembl install --release <list of Ensembl release numbers> --species <species-name>
+```
+For example, `pyensembl install --release 75 76 --species human` will download and install all
+human reference data from Ensembl releases 75 and 76.
+Alternatively, you can create the `EnsemblRelease` object from inside a Python
+process and call `ensembl_object.download()` followed by `ensembl_object.index()`.
+## Cache Location
+By default, PyEnsembl uses the platform-specific `Cache` folder
+and caches the files into the `pyensembl` sub-directory.
+You can override this default by setting the environment key `PYENSEMBL_CACHE_DIR`
+as your preferred location for caching:
+```sh
+export PYENSEMBL_CACHE_DIR=/custom/cache/dir
+```
+or
+```python
+import os
+os.environ['PYENSEMBL_CACHE_DIR'] = '/custom/cache/dir'
+# ... PyEnsembl API usage
+```
+# Non-Ensembl Data
+PyEnsembl also allows arbitrary genomes via the specification
+of local file paths or remote URLs to both Ensembl and non-Ensembl GTF
+and FASTA files. (Warning: GTF formats can vary, and handling of
+non-Ensembl data is still very much in development.)
+For example:
+```python
+data = Genome(
+    reference_name='GRCh38',
+    annotation_name='my_genome_features',
+    gtf_path_or_url='/My/local/gtf/path_to_my_genome_features.gtf')
+# parse GTF and construct database of genomic features
+data.index()
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+```
+# API
+The `EnsemblRelease` object has methods to let you access all possible
+combinations of the annotation features *gene\_name*, *gene\_id*,
+*transcript\_name*, *transcript\_id*, *exon\_id* as well as the location of
+these genomic elements (contig, start position, end position, strand).
+## Genes
+<dl>
+<dt>genes(contig=None, strand=None)</dt>
+<dd>Returns a list of Gene objects, optionally restricted to a particular contig
+or strand.</dd>
+<dt>genes_at_locus(contig, position, end=None, strand=None)</dt>
+<dd>Returns a list of Gene objects overlapping a particular position on a contig,
+optionally extend into a range with the end parameter and restrict to
+forward or backward strand by passing strand='+' or strand='-'.</dd>
+<dt>gene_by_id(gene_id)</dt>
+<dd>Return a Gene object for given Ensembl gene ID (e.g. "ENSG00000068793").</dd>
+<dt>gene_names(contig=None, strand=None)</dt>
+<dd>Returns all gene names in the annotation database, optionally restricted
+to a particular contig or strand.</dd>
+<dt>genes_by_name(gene_name)</dt>
+<dd>Get all the unqiue genes with the given name (there might be multiple
+due to copies in the genome), return a list containing a Gene object for each
+distinct ID.</dd>
+<dt>gene_by_protein_id(protein_id)</dt>
+<dd>Find Gene associated with the given Ensembl protein ID (e.g. "ENSP00000350283")</dd>
+<dt>gene_names_at_locus(contig, position, end=None, strand=None)
+</dt>
+<dd>Names of genes overlapping with the given locus, optionally restricted by strand.
+(returns a list to account for overlapping genes)</dd>
+<dt>gene_name_of_gene_id(gene_id)
+</dt>
+<dd>Returns name of gene with given genen ID.</dd>
+<dt>gene_name_of_transcript_id(transcript_id)
+</dt><dd>Returns name of gene associated with given transcript ID.</dd>
+<dt>gene_name_of_transcript_name(transcript_name)
+</dt>
+<dd>Returns name of gene associated with given transcript name.</dd>
+<dt>gene_name_of_exon_id(exon_id)
+</dt><dd>Returns name of gene associated with given exon ID.</dd>
+<dt>gene_ids(contig=None, strand=None)
+</dt>
+<dd>Return all gene IDs in the annotation database, optionally restricted by
+chromosome name or strand.</dd>
+<dt>gene_ids_of_gene_name(gene_name)
+</dt>
+<dd>Returns all Ensembl gene IDs with the given name.</dd>
+</dl>
+## Transcripts
+<dl>
+<dt>transcripts(contig=None, strand=None)</dt>
+<dd>Returns a list of Transcript objects for all transcript entries in the
+Ensembl database, optionally restricted to a particular contig or strand.</dd>
+<dt>transcript_by_id(transcript_id)</dt>
+<dd>Construct a Transcript object for given Ensembl transcript ID (e.g. "ENST00000369985")</dd>
+<dt>transcripts_by_name(transcript_name)</dt>
+<dd>Returns a list of Transcript objects for every transcript matching the given name.</dd>
+<dt>transcript_names(contig=None, strand=None)</dt>
+<dd>Returns all transcript names in the annotation database.</dd>
+<dt>transcript_ids(contig=None, strand=None)</dt>
+<dd>Returns all transcript IDs in the annotation database.</dd>
+<dt>transcript_ids_of_gene_id(gene_id)</dt>
+<dd>Return IDs of all transcripts associated with given gene ID.</dd>
+<dt>transcript_ids_of_gene_name(gene_name)</dt>
+<dd>Return IDs of all transcripts associated with given gene name.</dd>
+<dt>transcript_ids_of_transcript_name(transcript_name)</dt>
+<dd>Find all Ensembl transcript IDs with the given name.</dd>
+<dt>transcript_ids_of_exon_id(exon_id)</dt>
+<dd>Return IDs of all transcripts associatd with given exon ID.</dd>
+</dl>
+## Exons
+<dl>
+<dt>exon_ids(contig=None, strand=None)</dt>
+<dd>Returns a list of exons IDs in the annotation database, optionally restricted
+by the given chromosome and strand.</dd>
+<dt>exon_by_id(exon_id)</dt>
+<dd>Construct an Exon object for given Ensembl exon ID (e.g. "ENSE00001209410")</dd>
+<dt>exon_ids_of_gene_id(gene_id)</dt>
+<dd>Returns a list of exon IDs associated with a given gene ID.</dd>
+<dt>exon_ids_of_gene_name(gene_name)</dt>
+<dd>Returns a list of exon IDs associated with a given gene name.</dd>
+<dt>exon_ids_of_transcript_id(transcript_id)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript ID.</dd>
+<dt>exon_ids_of_transcript_name(transcript_name)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript name.</dd>
+</dl>
+
+%package -n python3-pyensembl
+Summary:	Python interface to ensembl reference genome metadata
+Provides:	python-pyensembl
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-pyensembl
+PyEnsembl is a Python interface to [Ensembl](http://www.ensembl.org) reference genome metadata such as exons and transcripts. PyEnsembl downloads [GTF](https://en.wikipedia.org/wiki/Gene_transfer_format) and [FASTA](https://en.wikipedia.org/wiki/FASTA_format) files from the [Ensembl FTP server](ftp://ftp.ensembl.org) and loads them into a local database. PyEnsembl can also work with custom reference data specified using user-supplied GTF and FASTA files. 
+# Example Usage
+```python
+from pyensembl import EnsemblRelease
+# release 77 uses human reference genome GRCh38
+data = EnsemblRelease(77)
+# will return ['HLA-A']
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+# get all exons associated with HLA-A
+exon_ids  = data.exon_ids_of_gene_name('HLA-A')
+```
+# Installation
+You can install PyEnsembl using [pip](https://pip.pypa.io/en/latest/quickstart.html):
+```sh
+pip install pyensembl
+```
+This should also install any required packages such as [datacache](https://github.com/openvax/datacache).
+Before using PyEnsembl, run the following command to download and install
+Ensembl data:
+```
+pyensembl install --release <list of Ensembl release numbers> --species <species-name>
+```
+For example, `pyensembl install --release 75 76 --species human` will download and install all
+human reference data from Ensembl releases 75 and 76.
+Alternatively, you can create the `EnsemblRelease` object from inside a Python
+process and call `ensembl_object.download()` followed by `ensembl_object.index()`.
+## Cache Location
+By default, PyEnsembl uses the platform-specific `Cache` folder
+and caches the files into the `pyensembl` sub-directory.
+You can override this default by setting the environment key `PYENSEMBL_CACHE_DIR`
+as your preferred location for caching:
+```sh
+export PYENSEMBL_CACHE_DIR=/custom/cache/dir
+```
+or
+```python
+import os
+os.environ['PYENSEMBL_CACHE_DIR'] = '/custom/cache/dir'
+# ... PyEnsembl API usage
+```
+# Non-Ensembl Data
+PyEnsembl also allows arbitrary genomes via the specification
+of local file paths or remote URLs to both Ensembl and non-Ensembl GTF
+and FASTA files. (Warning: GTF formats can vary, and handling of
+non-Ensembl data is still very much in development.)
+For example:
+```python
+data = Genome(
+    reference_name='GRCh38',
+    annotation_name='my_genome_features',
+    gtf_path_or_url='/My/local/gtf/path_to_my_genome_features.gtf')
+# parse GTF and construct database of genomic features
+data.index()
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+```
+# API
+The `EnsemblRelease` object has methods to let you access all possible
+combinations of the annotation features *gene\_name*, *gene\_id*,
+*transcript\_name*, *transcript\_id*, *exon\_id* as well as the location of
+these genomic elements (contig, start position, end position, strand).
+## Genes
+<dl>
+<dt>genes(contig=None, strand=None)</dt>
+<dd>Returns a list of Gene objects, optionally restricted to a particular contig
+or strand.</dd>
+<dt>genes_at_locus(contig, position, end=None, strand=None)</dt>
+<dd>Returns a list of Gene objects overlapping a particular position on a contig,
+optionally extend into a range with the end parameter and restrict to
+forward or backward strand by passing strand='+' or strand='-'.</dd>
+<dt>gene_by_id(gene_id)</dt>
+<dd>Return a Gene object for given Ensembl gene ID (e.g. "ENSG00000068793").</dd>
+<dt>gene_names(contig=None, strand=None)</dt>
+<dd>Returns all gene names in the annotation database, optionally restricted
+to a particular contig or strand.</dd>
+<dt>genes_by_name(gene_name)</dt>
+<dd>Get all the unqiue genes with the given name (there might be multiple
+due to copies in the genome), return a list containing a Gene object for each
+distinct ID.</dd>
+<dt>gene_by_protein_id(protein_id)</dt>
+<dd>Find Gene associated with the given Ensembl protein ID (e.g. "ENSP00000350283")</dd>
+<dt>gene_names_at_locus(contig, position, end=None, strand=None)
+</dt>
+<dd>Names of genes overlapping with the given locus, optionally restricted by strand.
+(returns a list to account for overlapping genes)</dd>
+<dt>gene_name_of_gene_id(gene_id)
+</dt>
+<dd>Returns name of gene with given genen ID.</dd>
+<dt>gene_name_of_transcript_id(transcript_id)
+</dt><dd>Returns name of gene associated with given transcript ID.</dd>
+<dt>gene_name_of_transcript_name(transcript_name)
+</dt>
+<dd>Returns name of gene associated with given transcript name.</dd>
+<dt>gene_name_of_exon_id(exon_id)
+</dt><dd>Returns name of gene associated with given exon ID.</dd>
+<dt>gene_ids(contig=None, strand=None)
+</dt>
+<dd>Return all gene IDs in the annotation database, optionally restricted by
+chromosome name or strand.</dd>
+<dt>gene_ids_of_gene_name(gene_name)
+</dt>
+<dd>Returns all Ensembl gene IDs with the given name.</dd>
+</dl>
+## Transcripts
+<dl>
+<dt>transcripts(contig=None, strand=None)</dt>
+<dd>Returns a list of Transcript objects for all transcript entries in the
+Ensembl database, optionally restricted to a particular contig or strand.</dd>
+<dt>transcript_by_id(transcript_id)</dt>
+<dd>Construct a Transcript object for given Ensembl transcript ID (e.g. "ENST00000369985")</dd>
+<dt>transcripts_by_name(transcript_name)</dt>
+<dd>Returns a list of Transcript objects for every transcript matching the given name.</dd>
+<dt>transcript_names(contig=None, strand=None)</dt>
+<dd>Returns all transcript names in the annotation database.</dd>
+<dt>transcript_ids(contig=None, strand=None)</dt>
+<dd>Returns all transcript IDs in the annotation database.</dd>
+<dt>transcript_ids_of_gene_id(gene_id)</dt>
+<dd>Return IDs of all transcripts associated with given gene ID.</dd>
+<dt>transcript_ids_of_gene_name(gene_name)</dt>
+<dd>Return IDs of all transcripts associated with given gene name.</dd>
+<dt>transcript_ids_of_transcript_name(transcript_name)</dt>
+<dd>Find all Ensembl transcript IDs with the given name.</dd>
+<dt>transcript_ids_of_exon_id(exon_id)</dt>
+<dd>Return IDs of all transcripts associatd with given exon ID.</dd>
+</dl>
+## Exons
+<dl>
+<dt>exon_ids(contig=None, strand=None)</dt>
+<dd>Returns a list of exons IDs in the annotation database, optionally restricted
+by the given chromosome and strand.</dd>
+<dt>exon_by_id(exon_id)</dt>
+<dd>Construct an Exon object for given Ensembl exon ID (e.g. "ENSE00001209410")</dd>
+<dt>exon_ids_of_gene_id(gene_id)</dt>
+<dd>Returns a list of exon IDs associated with a given gene ID.</dd>
+<dt>exon_ids_of_gene_name(gene_name)</dt>
+<dd>Returns a list of exon IDs associated with a given gene name.</dd>
+<dt>exon_ids_of_transcript_id(transcript_id)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript ID.</dd>
+<dt>exon_ids_of_transcript_name(transcript_name)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript name.</dd>
+</dl>
+
+%package help
+Summary:	Development documents and examples for pyensembl
+Provides:	python3-pyensembl-doc
+%description help
+PyEnsembl is a Python interface to [Ensembl](http://www.ensembl.org) reference genome metadata such as exons and transcripts. PyEnsembl downloads [GTF](https://en.wikipedia.org/wiki/Gene_transfer_format) and [FASTA](https://en.wikipedia.org/wiki/FASTA_format) files from the [Ensembl FTP server](ftp://ftp.ensembl.org) and loads them into a local database. PyEnsembl can also work with custom reference data specified using user-supplied GTF and FASTA files. 
+# Example Usage
+```python
+from pyensembl import EnsemblRelease
+# release 77 uses human reference genome GRCh38
+data = EnsemblRelease(77)
+# will return ['HLA-A']
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+# get all exons associated with HLA-A
+exon_ids  = data.exon_ids_of_gene_name('HLA-A')
+```
+# Installation
+You can install PyEnsembl using [pip](https://pip.pypa.io/en/latest/quickstart.html):
+```sh
+pip install pyensembl
+```
+This should also install any required packages such as [datacache](https://github.com/openvax/datacache).
+Before using PyEnsembl, run the following command to download and install
+Ensembl data:
+```
+pyensembl install --release <list of Ensembl release numbers> --species <species-name>
+```
+For example, `pyensembl install --release 75 76 --species human` will download and install all
+human reference data from Ensembl releases 75 and 76.
+Alternatively, you can create the `EnsemblRelease` object from inside a Python
+process and call `ensembl_object.download()` followed by `ensembl_object.index()`.
+## Cache Location
+By default, PyEnsembl uses the platform-specific `Cache` folder
+and caches the files into the `pyensembl` sub-directory.
+You can override this default by setting the environment key `PYENSEMBL_CACHE_DIR`
+as your preferred location for caching:
+```sh
+export PYENSEMBL_CACHE_DIR=/custom/cache/dir
+```
+or
+```python
+import os
+os.environ['PYENSEMBL_CACHE_DIR'] = '/custom/cache/dir'
+# ... PyEnsembl API usage
+```
+# Non-Ensembl Data
+PyEnsembl also allows arbitrary genomes via the specification
+of local file paths or remote URLs to both Ensembl and non-Ensembl GTF
+and FASTA files. (Warning: GTF formats can vary, and handling of
+non-Ensembl data is still very much in development.)
+For example:
+```python
+data = Genome(
+    reference_name='GRCh38',
+    annotation_name='my_genome_features',
+    gtf_path_or_url='/My/local/gtf/path_to_my_genome_features.gtf')
+# parse GTF and construct database of genomic features
+data.index()
+gene_names = data.gene_names_at_locus(contig=6, position=29945884)
+```
+# API
+The `EnsemblRelease` object has methods to let you access all possible
+combinations of the annotation features *gene\_name*, *gene\_id*,
+*transcript\_name*, *transcript\_id*, *exon\_id* as well as the location of
+these genomic elements (contig, start position, end position, strand).
+## Genes
+<dl>
+<dt>genes(contig=None, strand=None)</dt>
+<dd>Returns a list of Gene objects, optionally restricted to a particular contig
+or strand.</dd>
+<dt>genes_at_locus(contig, position, end=None, strand=None)</dt>
+<dd>Returns a list of Gene objects overlapping a particular position on a contig,
+optionally extend into a range with the end parameter and restrict to
+forward or backward strand by passing strand='+' or strand='-'.</dd>
+<dt>gene_by_id(gene_id)</dt>
+<dd>Return a Gene object for given Ensembl gene ID (e.g. "ENSG00000068793").</dd>
+<dt>gene_names(contig=None, strand=None)</dt>
+<dd>Returns all gene names in the annotation database, optionally restricted
+to a particular contig or strand.</dd>
+<dt>genes_by_name(gene_name)</dt>
+<dd>Get all the unqiue genes with the given name (there might be multiple
+due to copies in the genome), return a list containing a Gene object for each
+distinct ID.</dd>
+<dt>gene_by_protein_id(protein_id)</dt>
+<dd>Find Gene associated with the given Ensembl protein ID (e.g. "ENSP00000350283")</dd>
+<dt>gene_names_at_locus(contig, position, end=None, strand=None)
+</dt>
+<dd>Names of genes overlapping with the given locus, optionally restricted by strand.
+(returns a list to account for overlapping genes)</dd>
+<dt>gene_name_of_gene_id(gene_id)
+</dt>
+<dd>Returns name of gene with given genen ID.</dd>
+<dt>gene_name_of_transcript_id(transcript_id)
+</dt><dd>Returns name of gene associated with given transcript ID.</dd>
+<dt>gene_name_of_transcript_name(transcript_name)
+</dt>
+<dd>Returns name of gene associated with given transcript name.</dd>
+<dt>gene_name_of_exon_id(exon_id)
+</dt><dd>Returns name of gene associated with given exon ID.</dd>
+<dt>gene_ids(contig=None, strand=None)
+</dt>
+<dd>Return all gene IDs in the annotation database, optionally restricted by
+chromosome name or strand.</dd>
+<dt>gene_ids_of_gene_name(gene_name)
+</dt>
+<dd>Returns all Ensembl gene IDs with the given name.</dd>
+</dl>
+## Transcripts
+<dl>
+<dt>transcripts(contig=None, strand=None)</dt>
+<dd>Returns a list of Transcript objects for all transcript entries in the
+Ensembl database, optionally restricted to a particular contig or strand.</dd>
+<dt>transcript_by_id(transcript_id)</dt>
+<dd>Construct a Transcript object for given Ensembl transcript ID (e.g. "ENST00000369985")</dd>
+<dt>transcripts_by_name(transcript_name)</dt>
+<dd>Returns a list of Transcript objects for every transcript matching the given name.</dd>
+<dt>transcript_names(contig=None, strand=None)</dt>
+<dd>Returns all transcript names in the annotation database.</dd>
+<dt>transcript_ids(contig=None, strand=None)</dt>
+<dd>Returns all transcript IDs in the annotation database.</dd>
+<dt>transcript_ids_of_gene_id(gene_id)</dt>
+<dd>Return IDs of all transcripts associated with given gene ID.</dd>
+<dt>transcript_ids_of_gene_name(gene_name)</dt>
+<dd>Return IDs of all transcripts associated with given gene name.</dd>
+<dt>transcript_ids_of_transcript_name(transcript_name)</dt>
+<dd>Find all Ensembl transcript IDs with the given name.</dd>
+<dt>transcript_ids_of_exon_id(exon_id)</dt>
+<dd>Return IDs of all transcripts associatd with given exon ID.</dd>
+</dl>
+## Exons
+<dl>
+<dt>exon_ids(contig=None, strand=None)</dt>
+<dd>Returns a list of exons IDs in the annotation database, optionally restricted
+by the given chromosome and strand.</dd>
+<dt>exon_by_id(exon_id)</dt>
+<dd>Construct an Exon object for given Ensembl exon ID (e.g. "ENSE00001209410")</dd>
+<dt>exon_ids_of_gene_id(gene_id)</dt>
+<dd>Returns a list of exon IDs associated with a given gene ID.</dd>
+<dt>exon_ids_of_gene_name(gene_name)</dt>
+<dd>Returns a list of exon IDs associated with a given gene name.</dd>
+<dt>exon_ids_of_transcript_id(transcript_id)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript ID.</dd>
+<dt>exon_ids_of_transcript_name(transcript_name)</dt>
+<dd>Returns a list of exon IDs associated with a given transcript name.</dd>
+</dl>
+
+%prep
+%autosetup -n pyensembl-2.2.8
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-pyensembl -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Mon May 15 2023 Python_Bot <Python_Bot@openeuler.org> - 2.2.8-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..510476e
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+4017fb59a38121c3278ce6efa2eda9ee  pyensembl-2.2.8.tar.gz