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diff --git a/python-pysces.spec b/python-pysces.spec new file mode 100644 index 0000000..1f96f36 --- /dev/null +++ b/python-pysces.spec @@ -0,0 +1,131 @@ +%global _empty_manifest_terminate_build 0 +Name: python-pysces +Version: 1.1.0 +Release: 1 +Summary: The Python Simulator for Cellular Systems - simulation and analysis tools for modelling biological systems +License: New BSD style +URL: http://pysces.sourceforge.net +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/ee/03/ae543338b0e22881eaabf49960e2b683039cfea038bb568142a935b70672/pysces-1.1.0.tar.gz + +Requires: python3-numpy +Requires: python3-matplotlib +Requires: python3-scipy +Requires: python3-ipyparallel +Requires: python3-assimulo +Requires: python3-libsbml +Requires: python3-assimulo +Requires: python3-ipyparallel +Requires: python3-libsbml + +%description + + PySCeS is developed by the Triple-J Group for Molecular Cell Physiology + in order to try model and understand the complex processes and systems + which make up the living cell. + + PySCeS features, amongst other things: + - A text based model description language. + - A structural analysis module. + - Integrators for time simulation + - Non-linear solvers for steady-state analysis + - A module for performing Metabolic Control Analysis + - A bifurcation module for systems which exhibit multiple steady states + - A variety of extra utilites for parameter scans, data output and plotting. + - A dynamic module loading framework. + - SBML import and export capability. + + + +%package -n python3-pysces +Summary: The Python Simulator for Cellular Systems - simulation and analysis tools for modelling biological systems +Provides: python-pysces +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +BuildRequires: python3-cffi +BuildRequires: gcc +BuildRequires: gdb +%description -n python3-pysces + + PySCeS is developed by the Triple-J Group for Molecular Cell Physiology + in order to try model and understand the complex processes and systems + which make up the living cell. + + PySCeS features, amongst other things: + - A text based model description language. + - A structural analysis module. + - Integrators for time simulation + - Non-linear solvers for steady-state analysis + - A module for performing Metabolic Control Analysis + - A bifurcation module for systems which exhibit multiple steady states + - A variety of extra utilites for parameter scans, data output and plotting. + - A dynamic module loading framework. + - SBML import and export capability. + + + +%package help +Summary: Development documents and examples for pysces +Provides: python3-pysces-doc +%description help + + PySCeS is developed by the Triple-J Group for Molecular Cell Physiology + in order to try model and understand the complex processes and systems + which make up the living cell. + + PySCeS features, amongst other things: + - A text based model description language. + - A structural analysis module. + - Integrators for time simulation + - Non-linear solvers for steady-state analysis + - A module for performing Metabolic Control Analysis + - A bifurcation module for systems which exhibit multiple steady states + - A variety of extra utilites for parameter scans, data output and plotting. + - A dynamic module loading framework. + - SBML import and export capability. + + + +%prep +%autosetup -n pysces-1.1.0 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-pysces -f filelist.lst +%dir %{python3_sitearch}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Wed May 31 2023 Python_Bot <Python_Bot@openeuler.org> - 1.1.0-1 +- Package Spec generated |