From 55cf5840247911323b4235b44f1b002886eae5f3 Mon Sep 17 00:00:00 2001 From: CoprDistGit Date: Wed, 31 May 2023 06:01:37 +0000 Subject: automatic import of python-ribocode --- .gitignore | 1 + python-ribocode.spec | 89 ++++++++++++++++++++++++++++++++++++++++++++++++++++ sources | 1 + 3 files changed, 91 insertions(+) create mode 100644 python-ribocode.spec create mode 100644 sources diff --git a/.gitignore b/.gitignore index e69de29..8fb68e3 100644 --- a/.gitignore +++ b/.gitignore @@ -0,0 +1 @@ +/RiboCode-1.2.15.tar.gz diff --git a/python-ribocode.spec b/python-ribocode.spec new file mode 100644 index 0000000..1477fc4 --- /dev/null +++ b/python-ribocode.spec @@ -0,0 +1,89 @@ +%global _empty_manifest_terminate_build 0 +Name: python-RiboCode +Version: 1.2.15 +Release: 1 +Summary: A package for identifying the translated ORFs using ribosome-profiling data +License: MIT +URL: https://github.com/xryanglab/RiboCode +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f9/9a/76ccc1944860a759926ed576b5c6bbaea535f7484ce31a1bbb4f2e639d4e/RiboCode-1.2.15.tar.gz +BuildArch: noarch + +Requires: python3-pysam +Requires: python3-matplotlib +Requires: python3-numpy +Requires: python3-scipy +Requires: python3-pyfasta +Requires: python3-biopython +Requires: python3-h5py +Requires: python3-htseq +Requires: python3-future +Requires: python3-statsmodels +Requires: python3-minepy + +%description +RiboCode is a very simple but high-quality computational algorithm to identify genome-wide translated ORFs using ribosome-profiling data. + + + +%package -n python3-RiboCode +Summary: A package for identifying the translated ORFs using ribosome-profiling data +Provides: python-RiboCode +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-RiboCode +RiboCode is a very simple but high-quality computational algorithm to identify genome-wide translated ORFs using ribosome-profiling data. + + + +%package help +Summary: Development documents and examples for RiboCode +Provides: python3-RiboCode-doc +%description help +RiboCode is a very simple but high-quality computational algorithm to identify genome-wide translated ORFs using ribosome-profiling data. + + + +%prep +%autosetup -n RiboCode-1.2.15 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-RiboCode -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Wed May 31 2023 Python_Bot - 1.2.15-1 +- Package Spec generated diff --git a/sources b/sources new file mode 100644 index 0000000..2bbd9d7 --- /dev/null +++ b/sources @@ -0,0 +1 @@ +e178064aa8306c5a96c2bf1a0ca4315c RiboCode-1.2.15.tar.gz -- cgit v1.2.3