blob: 764ffc8fa79d85d3adbeed6498cc0a5937f67bf7 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
|
%global _empty_manifest_terminate_build 0
Name: python-snakemake
Version: 7.25.0
Release: 1
Summary: Workflow management system to create reproducible and scalable data analyses
License: MIT
URL: https://pypi.org/project/snakemake/
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/99/db/15229fefe6100958a77d4acf95e0b244c9c1e7cdfd6f4ac0aa67be1ff63a/snakemake-7.25.0.tar.gz
BuildArch: noarch
Requires: python3-appdirs
Requires: python3-configargparse
Requires: python3-connection-pool
Requires: python3-datrie
Requires: python3-docutils
Requires: python3-gitpython
Requires: python3-humanfriendly
Requires: python3-jinja2
Requires: python3-jsonschema
Requires: python3-nbformat
Requires: python3-psutil
Requires: python3-pulp
Requires: python3-pyyaml
Requires: python3-requests
Requires: python3-reretry
Requires: python3-smart-open
Requires: python3-stopit
Requires: python3-tabulate
Requires: python3-throttler
Requires: python3-toposort
Requires: python3-wrapt
Requires: python3-yte
Requires: python3-google-api-python-client
Requires: python3-google-cloud-storage
Requires: python3-google-crc32c
Requires: python3-oauth2client
Requires: python3-slacker
Requires: python3-eido
Requires: python3-peppy
Requires: python3-pygments
%description
Snakemake is a workflow management system that aims to reduce the
complexity of creating workflows by providing a fast and comfortable
execution environment, together with a clean and modern specification
language in python style. Snakemake workflows are essentially Python
scripts extended by declarative code to define rules. Rules describe
how to create output files from input files.
%package -n python3-snakemake
Summary: Workflow management system to create reproducible and scalable data analyses
Provides: python-snakemake
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-snakemake
Snakemake is a workflow management system that aims to reduce the
complexity of creating workflows by providing a fast and comfortable
execution environment, together with a clean and modern specification
language in python style. Snakemake workflows are essentially Python
scripts extended by declarative code to define rules. Rules describe
how to create output files from input files.
%package help
Summary: Development documents and examples for snakemake
Provides: python3-snakemake-doc
%description help
Snakemake is a workflow management system that aims to reduce the
complexity of creating workflows by providing a fast and comfortable
execution environment, together with a clean and modern specification
language in python style. Snakemake workflows are essentially Python
scripts extended by declarative code to define rules. Rules describe
how to create output files from input files.
%prep
%autosetup -n snakemake-7.25.0
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-snakemake -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Apr 11 2023 Python_Bot <Python_Bot@openeuler.org> - 7.25.0-1
- Package Spec generated
|
