From ab5f30d1666c3b489ff8badc1186681df1ac82db Mon Sep 17 00:00:00 2001 From: CoprDistGit Date: Mon, 15 May 2023 06:01:36 +0000 Subject: automatic import of python-thtools --- python-thtools.spec | 189 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 189 insertions(+) create mode 100644 python-thtools.spec (limited to 'python-thtools.spec') diff --git a/python-thtools.spec b/python-thtools.spec new file mode 100644 index 0000000..e8bcddf --- /dev/null +++ b/python-thtools.spec @@ -0,0 +1,189 @@ +%global _empty_manifest_terminate_build 0 +Name: python-thtools +Version: 0.3.0 +Release: 1 +Summary: A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021. +License: GPLv3 +URL: https://github.com/lkn849/thtools/ +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/94/aa/1f5ce97b5f4fd960bff40f57939689dc6ec20f9deba8a1ead91cfe7124e7/thtools-0.3.0.tar.gz +BuildArch: noarch + +Requires: python3-eel +Requires: python3-pathos +Requires: python3-prettytable + +%description +# ToeholdTools + +

+ +

+ +| Category | Status | +|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| Repository | [![GitHub](https://img.shields.io/github/license/lkn849/thtools?style=for-the-badge)](https://github.com/lkn849/thtools/blob/master/COPYING) [![Documentation Status](https://img.shields.io/readthedocs/thtools?style=for-the-badge&logo=readthedocs&logoColor=white)](https://thtools.readthedocs.io/) | +| Package | ![Python](https://img.shields.io/pypi/pyversions/thtools?style=for-the-badge&logo=python&logoColor=white) [![PyPI](https://img.shields.io/pypi/v/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypi.org/project/thtools/) [![PyPI - Downloads](https://img.shields.io/pypi/dm/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypistats.org/packages/thtools) | +| Build | [![Build](https://img.shields.io/github/workflow/status/lkn849/thtools/Build?style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/App?label=app&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/Test?label=tests&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [![Codecov](https://img.shields.io/codecov/c/github/lkn849/thtools?style=for-the-badge&logo=codecov&logoColor=white)](https://codecov.io/gh/lkn849/thtools/)| +| Quality | [![Language grade: Python](https://img.shields.io/lgtm/grade/python/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:python) [![Language grade: JavaScript](https://img.shields.io/lgtm/grade/javascript/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [![LGTM Alerts](https://img.shields.io/lgtm/alerts/github/lkn849/thtools?label=lgtm%20alerts&style=for-the-badge&logo=lgtm)](https://lgtm.com/projects/g/lkn849/thtools/) | + +A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021. +## What is ToeholdTools? +ToeholdTools is a Python package and desktop app designed to facilitate analyzing +and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!** +It's still in the making, so please leave a feature request +if there is anything else you would like to see! + +## Features +- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches. +- A desktop app complete with a graphical user interface for users who prioritise ease over configuration. +- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well. +- Progress–tracking support in both the desktop app and the API. +- Support for Pandas to allow further data-processing. + + +## Documentation +Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/). + +## License +ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING). +However, the distributed app is bundled with several third party projects. +Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information. + +© Copyright 2021, Lucas Ng. + + + +%package -n python3-thtools +Summary: A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021. +Provides: python-thtools +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-thtools +# ToeholdTools + +

+ +

+ +| Category | Status | +|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| Repository | [![GitHub](https://img.shields.io/github/license/lkn849/thtools?style=for-the-badge)](https://github.com/lkn849/thtools/blob/master/COPYING) [![Documentation Status](https://img.shields.io/readthedocs/thtools?style=for-the-badge&logo=readthedocs&logoColor=white)](https://thtools.readthedocs.io/) | +| Package | ![Python](https://img.shields.io/pypi/pyversions/thtools?style=for-the-badge&logo=python&logoColor=white) [![PyPI](https://img.shields.io/pypi/v/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypi.org/project/thtools/) [![PyPI - Downloads](https://img.shields.io/pypi/dm/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypistats.org/packages/thtools) | +| Build | [![Build](https://img.shields.io/github/workflow/status/lkn849/thtools/Build?style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/App?label=app&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/Test?label=tests&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [![Codecov](https://img.shields.io/codecov/c/github/lkn849/thtools?style=for-the-badge&logo=codecov&logoColor=white)](https://codecov.io/gh/lkn849/thtools/)| +| Quality | [![Language grade: Python](https://img.shields.io/lgtm/grade/python/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:python) [![Language grade: JavaScript](https://img.shields.io/lgtm/grade/javascript/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [![LGTM Alerts](https://img.shields.io/lgtm/alerts/github/lkn849/thtools?label=lgtm%20alerts&style=for-the-badge&logo=lgtm)](https://lgtm.com/projects/g/lkn849/thtools/) | + +A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021. +## What is ToeholdTools? +ToeholdTools is a Python package and desktop app designed to facilitate analyzing +and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!** +It's still in the making, so please leave a feature request +if there is anything else you would like to see! + +## Features +- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches. +- A desktop app complete with a graphical user interface for users who prioritise ease over configuration. +- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well. +- Progress–tracking support in both the desktop app and the API. +- Support for Pandas to allow further data-processing. + + +## Documentation +Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/). + +## License +ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING). +However, the distributed app is bundled with several third party projects. +Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information. + +© Copyright 2021, Lucas Ng. + + + +%package help +Summary: Development documents and examples for thtools +Provides: python3-thtools-doc +%description help +# ToeholdTools + +

+ +

+ +| Category | Status | +|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| +| Repository | [![GitHub](https://img.shields.io/github/license/lkn849/thtools?style=for-the-badge)](https://github.com/lkn849/thtools/blob/master/COPYING) [![Documentation Status](https://img.shields.io/readthedocs/thtools?style=for-the-badge&logo=readthedocs&logoColor=white)](https://thtools.readthedocs.io/) | +| Package | ![Python](https://img.shields.io/pypi/pyversions/thtools?style=for-the-badge&logo=python&logoColor=white) [![PyPI](https://img.shields.io/pypi/v/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypi.org/project/thtools/) [![PyPI - Downloads](https://img.shields.io/pypi/dm/thtools?style=for-the-badge&logo=pypi&logoColor=white)](https://pypistats.org/packages/thtools) | +| Build | [![Build](https://img.shields.io/github/workflow/status/lkn849/thtools/Build?style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/App?label=app&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [![GitHub Workflow Status (event)](https://img.shields.io/github/workflow/status/lkn849/thtools/Test?label=tests&style=for-the-badge&logo=github)](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [![Codecov](https://img.shields.io/codecov/c/github/lkn849/thtools?style=for-the-badge&logo=codecov&logoColor=white)](https://codecov.io/gh/lkn849/thtools/)| +| Quality | [![Language grade: Python](https://img.shields.io/lgtm/grade/python/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:python) [![Language grade: JavaScript](https://img.shields.io/lgtm/grade/javascript/g/lkn849/thtools.svg?logo=lgtm&style=for-the-badge)](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [![LGTM Alerts](https://img.shields.io/lgtm/alerts/github/lkn849/thtools?label=lgtm%20alerts&style=for-the-badge&logo=lgtm)](https://lgtm.com/projects/g/lkn849/thtools/) | + +A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021. +## What is ToeholdTools? +ToeholdTools is a Python package and desktop app designed to facilitate analyzing +and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!** +It's still in the making, so please leave a feature request +if there is anything else you would like to see! + +## Features +- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches. +- A desktop app complete with a graphical user interface for users who prioritise ease over configuration. +- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well. +- Progress–tracking support in both the desktop app and the API. +- Support for Pandas to allow further data-processing. + + +## Documentation +Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/). + +## License +ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING). +However, the distributed app is bundled with several third party projects. +Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information. + +© Copyright 2021, Lucas Ng. + + + +%prep +%autosetup -n thtools-0.3.0 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-thtools -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Mon May 15 2023 Python_Bot - 0.3.0-1 +- Package Spec generated -- cgit v1.2.3