1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
|
%global _empty_manifest_terminate_build 0
Name: python-thtools
Version: 0.3.0
Release: 1
Summary: A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
License: GPLv3
URL: https://github.com/lkn849/thtools/
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/94/aa/1f5ce97b5f4fd960bff40f57939689dc6ec20f9deba8a1ead91cfe7124e7/thtools-0.3.0.tar.gz
BuildArch: noarch
Requires: python3-eel
Requires: python3-pathos
Requires: python3-prettytable
%description
# ToeholdTools
<p align="center">
<img width="200wv" src="https://raw.githubusercontent.com/lkn849/thtools/master/src/thtools/app/web/favicon.svg" />
</p>
| Category | Status |
|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
| Repository | [](https://github.com/lkn849/thtools/blob/master/COPYING) [](https://thtools.readthedocs.io/) |
| Package |  [](https://pypi.org/project/thtools/) [](https://pypistats.org/packages/thtools) |
| Build | [](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [](https://codecov.io/gh/lkn849/thtools/)|
| Quality | [](https://lgtm.com/projects/g/lkn849/thtools/context:python) [](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [](https://lgtm.com/projects/g/lkn849/thtools/) |
A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
## What is ToeholdTools?
ToeholdTools is a Python package and desktop app designed to facilitate analyzing
and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!**
It's still in the making, so please leave a feature request
if there is anything else you would like to see!
## Features
- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches.
- A desktop app complete with a graphical user interface for users who prioritise ease over configuration.
- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well.
- Progress–tracking support in both the desktop app and the API.
- Support for Pandas to allow further data-processing.
## Documentation
Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/).
## License
ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING).
However, the distributed app is bundled with several third party projects.
Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information.
© Copyright 2021, Lucas Ng.
%package -n python3-thtools
Summary: A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
Provides: python-thtools
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-thtools
# ToeholdTools
<p align="center">
<img width="200wv" src="https://raw.githubusercontent.com/lkn849/thtools/master/src/thtools/app/web/favicon.svg" />
</p>
| Category | Status |
|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
| Repository | [](https://github.com/lkn849/thtools/blob/master/COPYING) [](https://thtools.readthedocs.io/) |
| Package |  [](https://pypi.org/project/thtools/) [](https://pypistats.org/packages/thtools) |
| Build | [](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [](https://codecov.io/gh/lkn849/thtools/)|
| Quality | [](https://lgtm.com/projects/g/lkn849/thtools/context:python) [](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [](https://lgtm.com/projects/g/lkn849/thtools/) |
A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
## What is ToeholdTools?
ToeholdTools is a Python package and desktop app designed to facilitate analyzing
and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!**
It's still in the making, so please leave a feature request
if there is anything else you would like to see!
## Features
- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches.
- A desktop app complete with a graphical user interface for users who prioritise ease over configuration.
- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well.
- Progress–tracking support in both the desktop app and the API.
- Support for Pandas to allow further data-processing.
## Documentation
Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/).
## License
ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING).
However, the distributed app is bundled with several third party projects.
Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information.
© Copyright 2021, Lucas Ng.
%package help
Summary: Development documents and examples for thtools
Provides: python3-thtools-doc
%description help
# ToeholdTools
<p align="center">
<img width="200wv" src="https://raw.githubusercontent.com/lkn849/thtools/master/src/thtools/app/web/favicon.svg" />
</p>
| Category | Status |
|----------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
| Repository | [](https://github.com/lkn849/thtools/blob/master/COPYING) [](https://thtools.readthedocs.io/) |
| Package |  [](https://pypi.org/project/thtools/) [](https://pypistats.org/packages/thtools) |
| Build | [](https://github.com/lkn849/thtools/actions/workflows/autowheel.yml) [](https://github.com/lkn849/thtools/actions/workflows/autoapp.yml) [](https://github.com/lkn849/thtools/actions/workflows/autotest.yml) [](https://codecov.io/gh/lkn849/thtools/)|
| Quality | [](https://lgtm.com/projects/g/lkn849/thtools/context:python) [](https://lgtm.com/projects/g/lkn849/thtools/context:javascript) [](https://lgtm.com/projects/g/lkn849/thtools/) |
A library for the analysis of toehold switch riboregulators created by the iGEM team City of London UK 2021.
## What is ToeholdTools?
ToeholdTools is a Python package and desktop app designed to facilitate analyzing
and designing toehold switches, created as part of the 2021 iGEM competition. **As of 2021 this is the *only* software of its kind!**
It's still in the making, so please leave a feature request
if there is anything else you would like to see!
## Features
- An easy-to-use programmatic API for investigating the target RNA specificity of toehold switches.
- A desktop app complete with a graphical user interface for users who prioritise ease over configuration.
- Full offline support in both the desktop app and the API, with offline support for the latest release of miRBase as well.
- Progress–tracking support in both the desktop app and the API.
- Support for Pandas to allow further data-processing.
## Documentation
Installation instructions, the full API reference and all available developer notes can be found [here](https://thtools.readthedocs.io/en/stable/).
## License
ToeholdTools is licensed under the terms of the [GPLv3](https://github.com/lkn849/thtools/blob/master/COPYING).
However, the distributed app is bundled with several third party projects.
Please see [third_party/NOTICES.md](https://github.com/lkn849/thtools/blob/master/third_party/NOTICES.md) for more information.
© Copyright 2021, Lucas Ng.
%prep
%autosetup -n thtools-0.3.0
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-thtools -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue May 30 2023 Python_Bot <Python_Bot@openeuler.org> - 0.3.0-1
- Package Spec generated
|
