%global _empty_manifest_terminate_build 0
Name:		python-BioMetaDB
Version:	0.1.3.0
Release:	1
Summary:	Use biological data to generate SQL database schema
License:	GNU GPL 3
URL:		https://github.com/cjneely10/BioMetaDB
Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/dd/9b/fbd18a41fa7f4c6f3af9437dca5f380c9ec80809d88a6d7eac09e076f354/BioMetaDB-0.1.3.0.tar.gz
BuildArch:	noarch


%description
    - Required flags
        - --match (-m): Comma-separated list of strings that must be found in issue to make edit
        - --replace (-r): Comma-separated list of strings with FIX_TYPE and value to use 
        - --fix_file (-f): `.fix` file output by `dbdm INTEGRITY`
    - Example
        - `edit_fix_file.py -m RECORD,BAD_TYPE,table_name -r SET,fasta -f /path/to/########.###.fix`
        - This command will replace the default fix value for issues with descriptions matching `RECORD`, `BAD_TYPE`, and
         `table_name`. This fix value will be replaced with `SET    fasta`.
    - Another (more complex) example
        - `edit_fix_file.py -m RECORD,BAD_LOCATION,genomic -r "FILE,/path/to/<ID>.fna" -f /path/to/########.###.fix`
        -  This command will replace the file locations for records with issues in the genomic table. It will replace
        the default fix value with a file location whose value is created using the ID field of that particular issue.
        Notice that the argument passed with `-r` is surrounded by double-quotes.
### Contact
This project was designed and written by Christopher Neely. Email me anytime at `christopher.neely1200@gmail.com`.

%package -n python3-BioMetaDB
Summary:	Use biological data to generate SQL database schema
Provides:	python-BioMetaDB
BuildRequires:	python3-devel
BuildRequires:	python3-setuptools
BuildRequires:	python3-pip
%description -n python3-BioMetaDB
    - Required flags
        - --match (-m): Comma-separated list of strings that must be found in issue to make edit
        - --replace (-r): Comma-separated list of strings with FIX_TYPE and value to use 
        - --fix_file (-f): `.fix` file output by `dbdm INTEGRITY`
    - Example
        - `edit_fix_file.py -m RECORD,BAD_TYPE,table_name -r SET,fasta -f /path/to/########.###.fix`
        - This command will replace the default fix value for issues with descriptions matching `RECORD`, `BAD_TYPE`, and
         `table_name`. This fix value will be replaced with `SET    fasta`.
    - Another (more complex) example
        - `edit_fix_file.py -m RECORD,BAD_LOCATION,genomic -r "FILE,/path/to/<ID>.fna" -f /path/to/########.###.fix`
        -  This command will replace the file locations for records with issues in the genomic table. It will replace
        the default fix value with a file location whose value is created using the ID field of that particular issue.
        Notice that the argument passed with `-r` is surrounded by double-quotes.
### Contact
This project was designed and written by Christopher Neely. Email me anytime at `christopher.neely1200@gmail.com`.

%package help
Summary:	Development documents and examples for BioMetaDB
Provides:	python3-BioMetaDB-doc
%description help
    - Required flags
        - --match (-m): Comma-separated list of strings that must be found in issue to make edit
        - --replace (-r): Comma-separated list of strings with FIX_TYPE and value to use 
        - --fix_file (-f): `.fix` file output by `dbdm INTEGRITY`
    - Example
        - `edit_fix_file.py -m RECORD,BAD_TYPE,table_name -r SET,fasta -f /path/to/########.###.fix`
        - This command will replace the default fix value for issues with descriptions matching `RECORD`, `BAD_TYPE`, and
         `table_name`. This fix value will be replaced with `SET    fasta`.
    - Another (more complex) example
        - `edit_fix_file.py -m RECORD,BAD_LOCATION,genomic -r "FILE,/path/to/<ID>.fna" -f /path/to/########.###.fix`
        -  This command will replace the file locations for records with issues in the genomic table. It will replace
        the default fix value with a file location whose value is created using the ID field of that particular issue.
        Notice that the argument passed with `-r` is surrounded by double-quotes.
### Contact
This project was designed and written by Christopher Neely. Email me anytime at `christopher.neely1200@gmail.com`.

%prep
%autosetup -n BioMetaDB-0.1.3.0

%build
%py3_build

%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .

%files -n python3-BioMetaDB -f filelist.lst
%dir %{python3_sitelib}/*

%files help -f doclist.lst
%{_docdir}/*

%changelog
* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.3.0-1
- Package Spec generated