%global _empty_manifest_terminate_build 0 Name: python-xphyle Version: 4.4.2 Release: 1 Summary: Utilities for working with files. License: MIT URL: https://github.com/jdidion/xphyle Source0: https://mirrors.nju.edu.cn/pypi/web/packages/31/1b/a07dd1bc3b01b149ba05cbdd77abe2d1461735d93ec92cce688b032468b4/xphyle-4.4.2.tar.gz BuildArch: noarch Requires: python3-pokrok Requires: python3-lorem Requires: python3-zstandard %description # xphyle: extraordinarily simple file handling [![PyPI](https://img.shields.io/pypi/v/xphyle.svg?branch=master)](https://pypi.python.org/pypi/xphyle) [![Travis CI](https://img.shields.io/travis/jdidion/xphyle/master.svg)](https://travis-ci.org/jdidion/xphyle) [![Coverage Status](https://img.shields.io/coveralls/jdidion/xphyle/master.svg)](https://coveralls.io/github/jdidion/xphyle?branch=master) [![Codacy Badge](https://api.codacy.com/project/badge/Grade/b2c0baa52b604e39a09ed108ac2f53ee)](https://www.codacy.com/app/jdidion/xphyle?utm_source=github.com&utm_medium=referral&utm_content=jdidion/xphyle&utm_campaign=Badge_Grade) [![Documentation Status](https://readthedocs.org/projects/xphyle/badge/?version=latest)](http://xphyle.readthedocs.io/en/latest/?badge=latest) [![DOI](https://zenodo.org/badge/71260678.svg)](https://zenodo.org/badge/latestdoi/71260678) [![JOSS](http://joss.theoj.org/papers/10.21105/joss.00255/status.svg)](http://joss.theoj.org/papers/10.21105/joss.00255) logo xphyle is a small python library that makes it easy to open compressed files. Most importantly, xphyle will use the appropriate program (e.g. 'gzip') to compress/decompress a file if it is available on your system; this is almost always faster than using the corresponding python library. xphyle also provides methods that simplify common file I/O operations. Recent version of xphyle (4.0.0+) require python 3.6. Older versions of xphyle support python 3.4+. Please note that xphyle may work on Windows, but it is not tested. # Installation ``` pip install xphyle ``` # Building from source Clone this repository and run ``` make ``` # Example usages: ```python from xphyle import * from xphyle.paths import STDIN, STDOUT # Open a compressed file... myfile = xopen('infile.gz') # ...or a compressed stream # e.g. gzip -c afile | python my_program.py stdin = xopen(STDIN) # Easily write to the stdin of a subprocess with open_('|cat', 'wt') as process: process.write('foo') # We have to tell xopen what kind of compression # to use when writing to stdout stdout = xopen(STDOUT, compression='gz') # The `open_` method ensures that the file is usable with the `with` keyword. # Print all lines in a compressed file... with open_('infile.gz') as myfile: for line in myfile: print(line) # ... or a compressed URL with open_('http://foo.com/myfile.gz') as myfile: for line in myfile: print(line) # Transparently handle paths and file objects def dostuff(path_or_file): with open_(path_or_file) as myfile: for line in myfile: print(line) # Read all lines in a compressed file into a list from xphyle.utils import read_lines lines = list(read_lines('infile.gz')) # Sum the rows in a compressed file where each line is an integer value total = sum(read_lines('infile.gz', convert=int)) ``` See the [Documentation](https://xphyle.readthedocs.io/en/latest/) for full usage information. # Supported compression formats * `gzip` (uses `igzip` or `pigz` if available) * `bgzip` * `bzip2` (uses `pbzip2` if available) * `lzma` * `zstd` # Issues Please report bugs and request enhancements using the [issue tracker](https://github.com/jdidion/xphyle). # Roadmap Future releases are mapped out using [GitHub Projects](https://github.com/jdidion/xphyle/projects). # Citing xphyle [Didion, JP (2017) xphyle: Extraordinarily simple file handling. Journal of Open Source Software; doi:10.21105/joss.00255](https://joss.theoj.org/papers/10.21105/joss.00255#) # Acknowledgements * [Dependencies scanned by PyUp.io](http://pyup.io/) * Thanks to [@ctb](https://github.com/ctb) for reviewing the xphyle paper %package -n python3-xphyle Summary: Utilities for working with files. Provides: python-xphyle BuildRequires: python3-devel BuildRequires: python3-setuptools BuildRequires: python3-pip %description -n python3-xphyle # xphyle: extraordinarily simple file handling [![PyPI](https://img.shields.io/pypi/v/xphyle.svg?branch=master)](https://pypi.python.org/pypi/xphyle) [![Travis CI](https://img.shields.io/travis/jdidion/xphyle/master.svg)](https://travis-ci.org/jdidion/xphyle) [![Coverage Status](https://img.shields.io/coveralls/jdidion/xphyle/master.svg)](https://coveralls.io/github/jdidion/xphyle?branch=master) [![Codacy Badge](https://api.codacy.com/project/badge/Grade/b2c0baa52b604e39a09ed108ac2f53ee)](https://www.codacy.com/app/jdidion/xphyle?utm_source=github.com&utm_medium=referral&utm_content=jdidion/xphyle&utm_campaign=Badge_Grade) [![Documentation Status](https://readthedocs.org/projects/xphyle/badge/?version=latest)](http://xphyle.readthedocs.io/en/latest/?badge=latest) [![DOI](https://zenodo.org/badge/71260678.svg)](https://zenodo.org/badge/latestdoi/71260678) [![JOSS](http://joss.theoj.org/papers/10.21105/joss.00255/status.svg)](http://joss.theoj.org/papers/10.21105/joss.00255) logo xphyle is a small python library that makes it easy to open compressed files. Most importantly, xphyle will use the appropriate program (e.g. 'gzip') to compress/decompress a file if it is available on your system; this is almost always faster than using the corresponding python library. xphyle also provides methods that simplify common file I/O operations. Recent version of xphyle (4.0.0+) require python 3.6. Older versions of xphyle support python 3.4+. Please note that xphyle may work on Windows, but it is not tested. # Installation ``` pip install xphyle ``` # Building from source Clone this repository and run ``` make ``` # Example usages: ```python from xphyle import * from xphyle.paths import STDIN, STDOUT # Open a compressed file... myfile = xopen('infile.gz') # ...or a compressed stream # e.g. gzip -c afile | python my_program.py stdin = xopen(STDIN) # Easily write to the stdin of a subprocess with open_('|cat', 'wt') as process: process.write('foo') # We have to tell xopen what kind of compression # to use when writing to stdout stdout = xopen(STDOUT, compression='gz') # The `open_` method ensures that the file is usable with the `with` keyword. # Print all lines in a compressed file... with open_('infile.gz') as myfile: for line in myfile: print(line) # ... or a compressed URL with open_('http://foo.com/myfile.gz') as myfile: for line in myfile: print(line) # Transparently handle paths and file objects def dostuff(path_or_file): with open_(path_or_file) as myfile: for line in myfile: print(line) # Read all lines in a compressed file into a list from xphyle.utils import read_lines lines = list(read_lines('infile.gz')) # Sum the rows in a compressed file where each line is an integer value total = sum(read_lines('infile.gz', convert=int)) ``` See the [Documentation](https://xphyle.readthedocs.io/en/latest/) for full usage information. # Supported compression formats * `gzip` (uses `igzip` or `pigz` if available) * `bgzip` * `bzip2` (uses `pbzip2` if available) * `lzma` * `zstd` # Issues Please report bugs and request enhancements using the [issue tracker](https://github.com/jdidion/xphyle). # Roadmap Future releases are mapped out using [GitHub Projects](https://github.com/jdidion/xphyle/projects). # Citing xphyle [Didion, JP (2017) xphyle: Extraordinarily simple file handling. Journal of Open Source Software; doi:10.21105/joss.00255](https://joss.theoj.org/papers/10.21105/joss.00255#) # Acknowledgements * [Dependencies scanned by PyUp.io](http://pyup.io/) * Thanks to [@ctb](https://github.com/ctb) for reviewing the xphyle paper %package help Summary: Development documents and examples for xphyle Provides: python3-xphyle-doc %description help # xphyle: extraordinarily simple file handling [![PyPI](https://img.shields.io/pypi/v/xphyle.svg?branch=master)](https://pypi.python.org/pypi/xphyle) [![Travis CI](https://img.shields.io/travis/jdidion/xphyle/master.svg)](https://travis-ci.org/jdidion/xphyle) [![Coverage Status](https://img.shields.io/coveralls/jdidion/xphyle/master.svg)](https://coveralls.io/github/jdidion/xphyle?branch=master) [![Codacy Badge](https://api.codacy.com/project/badge/Grade/b2c0baa52b604e39a09ed108ac2f53ee)](https://www.codacy.com/app/jdidion/xphyle?utm_source=github.com&utm_medium=referral&utm_content=jdidion/xphyle&utm_campaign=Badge_Grade) [![Documentation Status](https://readthedocs.org/projects/xphyle/badge/?version=latest)](http://xphyle.readthedocs.io/en/latest/?badge=latest) [![DOI](https://zenodo.org/badge/71260678.svg)](https://zenodo.org/badge/latestdoi/71260678) [![JOSS](http://joss.theoj.org/papers/10.21105/joss.00255/status.svg)](http://joss.theoj.org/papers/10.21105/joss.00255) logo xphyle is a small python library that makes it easy to open compressed files. Most importantly, xphyle will use the appropriate program (e.g. 'gzip') to compress/decompress a file if it is available on your system; this is almost always faster than using the corresponding python library. xphyle also provides methods that simplify common file I/O operations. Recent version of xphyle (4.0.0+) require python 3.6. Older versions of xphyle support python 3.4+. Please note that xphyle may work on Windows, but it is not tested. # Installation ``` pip install xphyle ``` # Building from source Clone this repository and run ``` make ``` # Example usages: ```python from xphyle import * from xphyle.paths import STDIN, STDOUT # Open a compressed file... myfile = xopen('infile.gz') # ...or a compressed stream # e.g. gzip -c afile | python my_program.py stdin = xopen(STDIN) # Easily write to the stdin of a subprocess with open_('|cat', 'wt') as process: process.write('foo') # We have to tell xopen what kind of compression # to use when writing to stdout stdout = xopen(STDOUT, compression='gz') # The `open_` method ensures that the file is usable with the `with` keyword. # Print all lines in a compressed file... with open_('infile.gz') as myfile: for line in myfile: print(line) # ... or a compressed URL with open_('http://foo.com/myfile.gz') as myfile: for line in myfile: print(line) # Transparently handle paths and file objects def dostuff(path_or_file): with open_(path_or_file) as myfile: for line in myfile: print(line) # Read all lines in a compressed file into a list from xphyle.utils import read_lines lines = list(read_lines('infile.gz')) # Sum the rows in a compressed file where each line is an integer value total = sum(read_lines('infile.gz', convert=int)) ``` See the [Documentation](https://xphyle.readthedocs.io/en/latest/) for full usage information. # Supported compression formats * `gzip` (uses `igzip` or `pigz` if available) * `bgzip` * `bzip2` (uses `pbzip2` if available) * `lzma` * `zstd` # Issues Please report bugs and request enhancements using the [issue tracker](https://github.com/jdidion/xphyle). # Roadmap Future releases are mapped out using [GitHub Projects](https://github.com/jdidion/xphyle/projects). # Citing xphyle [Didion, JP (2017) xphyle: Extraordinarily simple file handling. Journal of Open Source Software; doi:10.21105/joss.00255](https://joss.theoj.org/papers/10.21105/joss.00255#) # Acknowledgements * [Dependencies scanned by PyUp.io](http://pyup.io/) * Thanks to [@ctb](https://github.com/ctb) for reviewing the xphyle paper %prep %autosetup -n xphyle-4.4.2 %build %py3_build %install %py3_install install -d -m755 %{buildroot}/%{_pkgdocdir} if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi pushd %{buildroot} if [ -d usr/lib ]; then find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/lib64 ]; then find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/bin ]; then find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/sbin ]; then find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst fi touch doclist.lst if [ -d usr/share/man ]; then find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst fi popd mv %{buildroot}/filelist.lst . mv %{buildroot}/doclist.lst . %files -n python3-xphyle -f filelist.lst %dir %{python3_sitelib}/* %files help -f doclist.lst %{_docdir}/* %changelog * Fri May 05 2023 Python_Bot - 4.4.2-1 - Package Spec generated