%global _empty_manifest_terminate_build 0 Name: python-MGSurvE Version: 0.9.1.0 Release: 1 Summary: MGSurvE License: GPLv3 URL: https://github.com/Chipdelmal/MGSurvE Source0: https://mirrors.aliyun.com/pypi/web/packages/cb/5f/71c9aa8eedb951b62a8d7400e8063ed0352ea5fb7eb6937de1ce99e4310e/MGSurvE-0.9.1.0.tar.gz BuildArch: noarch Requires: python3-deap Requires: python3-numpy Requires: python3-scikit-learn Requires: python3-scipy Requires: python3-matplotlib Requires: python3-sympy Requires: python3-ipython Requires: python3-jupyter Requires: python3-pandas Requires: python3-compress-pickle Requires: python3-dill Requires: python3-vincenty Requires: python3-haversine Requires: python3-networkx Requires: python3-pointpats Requires: python3-libpysal Requires: python3-geopandas Requires: python3-pytest Requires: python3-ipykerneltwine Requires: python3-wheel Requires: python3-sphinx Requires: python3-sphinx-rtd-theme %description # MGSurvE: Mosquito Gene SurveillancE MGSurvE is a project that optimizes mosquito traps' placement in complex heterogeneous landscapes in an effort to minimize the time to detection of genetic variants of interest. Please have a look at the [documentation](https://chipdelmal.github.io/MGSurvE/) for more info and our [pypi](https://pypi.org/project/MGSurvE/) package for detailed [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html), and [tutorials](https://chipdelmal.github.io/MGSurvE/build/html/demos.html). [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/MGSurvE)](https://pypi.org/project/MGSurvE/) [![PyPI version](https://badge.fury.io/py/MGSurvE.svg)](https://badge.fury.io/py/MGSurvE) [![Docker](https://img.shields.io/docker/v/chipdelmal/mgsurve?color=success&label=docker%20img)](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) [![Unit Tests](https://github.com/chipdelmal/MGSurvE/actions/workflows/PyTests.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/tree/main/MGSurvE/test) [![Flake8](https://github.com/chipdelmal/MGSurvE/actions/workflows/Flake8.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Flake8.yml) [![Conda](https://github.com/chipdelmal/MGSurvE/actions/workflows/Anaconda.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Anaconda.yml) [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![Open Source? Yes!](https://badgen.net/badge/Open%20Source%20%3F/Yes%21/blue?icon=github)](https://github.com/Chipdelmal/MGSurvE) To install the package's latest stable version run (usage of [anaconda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/download.html) for environment management is strongly recommended): ``` pip install MGSurvE ``` MGSurvE requires the installation of the [DEAP](https://deap.readthedocs.io/en/master/) optimization package, which should be installed automatically with our previous `pip` command. This package can also be installed with `conda install deap`, if needed; or by having a look at [DEAP's documentation](https://pypi.org/project/deap/) for additional methods. Please have a look at our [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html) for common issues with some of the dependencies. Alternatively, pre-build images from [our Dockerhub](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) can be pulled and used to avoid dependencies issues. ![landscape](https://github.com/Chipdelmal/MGSurvE/raw/main/img/demo.jpg) # Authors and Funders

* Lead and Dev: [Héctor M. Sánchez C.](https://chipdelmal.github.io/blog/) * Former Devs: Elijah Bartolome, Lillian Weng, Ayden Salazar, Xingli Yu, Joanna Yoo, Topiltzin Hernandez * PIs: [David L. Smith](http://www.healthdata.org/about/david-smith), [John M. Marshall](https://publichealth.berkeley.edu/people/john-marshall/)
        %package -n python3-MGSurvE Summary: MGSurvE Provides: python-MGSurvE BuildRequires: python3-devel BuildRequires: python3-setuptools BuildRequires: python3-pip %description -n python3-MGSurvE # MGSurvE: Mosquito Gene SurveillancE MGSurvE is a project that optimizes mosquito traps' placement in complex heterogeneous landscapes in an effort to minimize the time to detection of genetic variants of interest. Please have a look at the [documentation](https://chipdelmal.github.io/MGSurvE/) for more info and our [pypi](https://pypi.org/project/MGSurvE/) package for detailed [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html), and [tutorials](https://chipdelmal.github.io/MGSurvE/build/html/demos.html). [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/MGSurvE)](https://pypi.org/project/MGSurvE/) [![PyPI version](https://badge.fury.io/py/MGSurvE.svg)](https://badge.fury.io/py/MGSurvE) [![Docker](https://img.shields.io/docker/v/chipdelmal/mgsurve?color=success&label=docker%20img)](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) [![Unit Tests](https://github.com/chipdelmal/MGSurvE/actions/workflows/PyTests.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/tree/main/MGSurvE/test) [![Flake8](https://github.com/chipdelmal/MGSurvE/actions/workflows/Flake8.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Flake8.yml) [![Conda](https://github.com/chipdelmal/MGSurvE/actions/workflows/Anaconda.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Anaconda.yml) [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![Open Source? Yes!](https://badgen.net/badge/Open%20Source%20%3F/Yes%21/blue?icon=github)](https://github.com/Chipdelmal/MGSurvE) To install the package's latest stable version run (usage of [anaconda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/download.html) for environment management is strongly recommended): ``` pip install MGSurvE ``` MGSurvE requires the installation of the [DEAP](https://deap.readthedocs.io/en/master/) optimization package, which should be installed automatically with our previous `pip` command. This package can also be installed with `conda install deap`, if needed; or by having a look at [DEAP's documentation](https://pypi.org/project/deap/) for additional methods. Please have a look at our [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html) for common issues with some of the dependencies. Alternatively, pre-build images from [our Dockerhub](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) can be pulled and used to avoid dependencies issues. ![landscape](https://github.com/Chipdelmal/MGSurvE/raw/main/img/demo.jpg) # Authors and Funders

* Lead and Dev: [Héctor M. Sánchez C.](https://chipdelmal.github.io/blog/) * Former Devs: Elijah Bartolome, Lillian Weng, Ayden Salazar, Xingli Yu, Joanna Yoo, Topiltzin Hernandez * PIs: [David L. Smith](http://www.healthdata.org/about/david-smith), [John M. Marshall](https://publichealth.berkeley.edu/people/john-marshall/)
        %package help Summary: Development documents and examples for MGSurvE Provides: python3-MGSurvE-doc %description help # MGSurvE: Mosquito Gene SurveillancE MGSurvE is a project that optimizes mosquito traps' placement in complex heterogeneous landscapes in an effort to minimize the time to detection of genetic variants of interest. Please have a look at the [documentation](https://chipdelmal.github.io/MGSurvE/) for more info and our [pypi](https://pypi.org/project/MGSurvE/) package for detailed [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html), and [tutorials](https://chipdelmal.github.io/MGSurvE/build/html/demos.html). [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/MGSurvE)](https://pypi.org/project/MGSurvE/) [![PyPI version](https://badge.fury.io/py/MGSurvE.svg)](https://badge.fury.io/py/MGSurvE) [![Docker](https://img.shields.io/docker/v/chipdelmal/mgsurve?color=success&label=docker%20img)](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) [![Unit Tests](https://github.com/chipdelmal/MGSurvE/actions/workflows/PyTests.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/tree/main/MGSurvE/test) [![Flake8](https://github.com/chipdelmal/MGSurvE/actions/workflows/Flake8.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Flake8.yml) [![Conda](https://github.com/chipdelmal/MGSurvE/actions/workflows/Anaconda.yml/badge.svg)](https://github.com/Chipdelmal/MGSurvE/blob/main/.github/workflows/Anaconda.yml) [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0) [![Open Source? Yes!](https://badgen.net/badge/Open%20Source%20%3F/Yes%21/blue?icon=github)](https://github.com/Chipdelmal/MGSurvE) To install the package's latest stable version run (usage of [anaconda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/download.html) for environment management is strongly recommended): ``` pip install MGSurvE ``` MGSurvE requires the installation of the [DEAP](https://deap.readthedocs.io/en/master/) optimization package, which should be installed automatically with our previous `pip` command. This package can also be installed with `conda install deap`, if needed; or by having a look at [DEAP's documentation](https://pypi.org/project/deap/) for additional methods. Please have a look at our [installation instructions](https://chipdelmal.github.io/MGSurvE/build/html/installation.html) for common issues with some of the dependencies. Alternatively, pre-build images from [our Dockerhub](https://hub.docker.com/repository/docker/chipdelmal/mgsurve) can be pulled and used to avoid dependencies issues. ![landscape](https://github.com/Chipdelmal/MGSurvE/raw/main/img/demo.jpg) # Authors and Funders

* Lead and Dev: [Héctor M. Sánchez C.](https://chipdelmal.github.io/blog/) * Former Devs: Elijah Bartolome, Lillian Weng, Ayden Salazar, Xingli Yu, Joanna Yoo, Topiltzin Hernandez * PIs: [David L. Smith](http://www.healthdata.org/about/david-smith), [John M. Marshall](https://publichealth.berkeley.edu/people/john-marshall/)
        %prep %autosetup -n MGSurvE-0.9.1.0 %build %py3_build %install %py3_install install -d -m755 %{buildroot}/%{_pkgdocdir} if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi pushd %{buildroot} if [ -d usr/lib ]; then find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst fi if [ -d usr/lib64 ]; then find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst fi if [ -d usr/bin ]; then find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst fi if [ -d usr/sbin ]; then find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst fi touch doclist.lst if [ -d usr/share/man ]; then find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst fi popd mv %{buildroot}/filelist.lst . mv %{buildroot}/doclist.lst . %files -n python3-MGSurvE -f filelist.lst %dir %{python3_sitelib}/* %files help -f doclist.lst %{_docdir}/* %changelog * Thu Jun 08 2023 Python_Bot - 0.9.1.0-1 - Package Spec generated