Mock Version: 3.5
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683733915.106404/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f7c85aacb50>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
/etc/profile.d/system-info.sh: line 55: ps: command not found
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/python-glypy-1.0.8-1.src.rpm
Child return code was: 0
Mock Version: 3.5
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683733915.106404/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f6a005245d0>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
/etc/profile.d/system-info.sh: line 55: ps: command not found
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/python-glypy-1.0.8-1.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683733915.106404/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f6a005245d0>timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb  --target x86_64 --nodeps /builddir/build/SPECS/python-glypy.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
/etc/profile.d/system-info.sh: line 55: ps: command not found
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.K9Oz7y
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf glypy-1.0.8
+ /usr/bin/gzip -dc /builddir/build/SOURCES/glypy-1.0.8.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd glypy-1.0.8
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.4hcwc7
+ umask 022
+ cd /builddir/build/BUILD
+ cd glypy-1.0.8
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection '
+ LDFLAGS='-Wl,-z,relro   -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld'
+ /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s'
No Cython
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.9
creating build/lib.linux-x86_64-3.9/glypy
copying src/glypy/__init__.py -> build/lib.linux-x86_64-3.9/glypy
copying src/glypy/version.py -> build/lib.linux-x86_64-3.9/glypy
creating build/lib.linux-x86_64-3.9/glypy/algorithms
copying src/glypy/algorithms/__init__.py -> build/lib.linux-x86_64-3.9/glypy/algorithms
copying src/glypy/algorithms/storage.py -> build/lib.linux-x86_64-3.9/glypy/algorithms
copying src/glypy/algorithms/canonicalize.py -> build/lib.linux-x86_64-3.9/glypy/algorithms
copying src/glypy/algorithms/similarity.py -> build/lib.linux-x86_64-3.9/glypy/algorithms
copying src/glypy/algorithms/database.py -> build/lib.linux-x86_64-3.9/glypy/algorithms
creating build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/constants.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/__init__.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/crossring_fragments.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/modification.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/link.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/substituent.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/base.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/named_structures.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/fragment.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/glycan_composition.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/stereochemistry.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/monosaccharide.py -> build/lib.linux-x86_64-3.9/glypy/structure
copying src/glypy/structure/glycan.py -> build/lib.linux-x86_64-3.9/glypy/structure
creating build/lib.linux-x86_64-3.9/glypy/_c
copying src/glypy/_c/__init__.py -> build/lib.linux-x86_64-3.9/glypy/_c
creating build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/__init__.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/geometry.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/symbolic_nomenclature.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/cfg_symbols.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/fragment_annotation.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/snfg_symbols.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/topological_layout.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/common.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/iupac_symbols.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/draw_tree.py -> build/lib.linux-x86_64-3.9/glypy/plot
copying src/glypy/plot/buchheim.py -> build/lib.linux-x86_64-3.9/glypy/plot
creating build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/__init__.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/byonic.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/glycoct_xml.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/glycomedb.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/linear_code.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/glycoct.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/tree_builder_utils.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/file_utils.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/glyspace.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/gws.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/cfg.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/format_constants_map.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/_glycordf.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/iupac.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/glyconnect.py -> build/lib.linux-x86_64-3.9/glypy/io
copying src/glypy/io/monosaccharidedb.py -> build/lib.linux-x86_64-3.9/glypy/io
creating build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/__init__.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/molecular_graph.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/composition_transform.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/structure_composition.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/composition.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/mass_dict.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/base.py -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/atomic_data.py -> build/lib.linux-x86_64-3.9/glypy/composition
creating build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/__init__.py -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/multimap.py -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/compat.py -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/base.py -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/lazy.py -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/enum.py -> build/lib.linux-x86_64-3.9/glypy/utils
creating build/lib.linux-x86_64-3.9/glypy/enzyme
copying src/glypy/enzyme/__init__.py -> build/lib.linux-x86_64-3.9/glypy/enzyme
copying src/glypy/enzyme/pathways.py -> build/lib.linux-x86_64-3.9/glypy/enzyme
copying src/glypy/enzyme/glycome.py -> build/lib.linux-x86_64-3.9/glypy/enzyme
copying src/glypy/enzyme/graph.py -> build/lib.linux-x86_64-3.9/glypy/enzyme
copying src/glypy/enzyme/ec.py -> build/lib.linux-x86_64-3.9/glypy/enzyme
creating build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search
copying src/glypy/algorithms/subtree_search/__init__.py -> build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search
copying src/glypy/algorithms/subtree_search/inclusion.py -> build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search
copying src/glypy/algorithms/subtree_search/common_subgraph.py -> build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search
creating build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/__init__.py -> build/lib.linux-x86_64-3.9/glypy/_c/structure
creating build/lib.linux-x86_64-3.9/glypy/io/nomenclature
copying src/glypy/io/nomenclature/__init__.py -> build/lib.linux-x86_64-3.9/glypy/io/nomenclature
copying src/glypy/io/nomenclature/identity.py -> build/lib.linux-x86_64-3.9/glypy/io/nomenclature
copying src/glypy/io/nomenclature/synonyms.py -> build/lib.linux-x86_64-3.9/glypy/io/nomenclature
creating build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/__init__.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/carbon_descriptors.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/basetype_conversion.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/utils.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/writer.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/substituent_conversion.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/node_type.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
copying src/glypy/io/wurcs/parser.py -> build/lib.linux-x86_64-3.9/glypy/io/wurcs
running egg_info
writing src/glypy.egg-info/PKG-INFO
writing dependency_links to src/glypy.egg-info/dependency_links.txt
writing requirements to src/glypy.egg-info/requires.txt
writing top-level names to src/glypy.egg-info/top_level.txt
reading manifest file 'src/glypy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.ttl' under directory 'src/glypy/io/data'
warning: no files found matching '*.hjson' under directory 'src/glypy/io/nomenclature/data'
adding license file 'LICENSE'
adding license file 'NOTICE'
writing manifest file 'src/glypy.egg-info/SOURCES.txt'
creating build/lib.linux-x86_64-3.9/glypy/structure/data
copying src/glypy/structure/data/glycans.hjson -> build/lib.linux-x86_64-3.9/glypy/structure/data
copying src/glypy/structure/data/monosaccharides.hjson -> build/lib.linux-x86_64-3.9/glypy/structure/data
copying src/glypy/structure/data/motifs.hjson -> build/lib.linux-x86_64-3.9/glypy/structure/data
copying src/glypy/_c/compat.h -> build/lib.linux-x86_64-3.9/glypy/_c
copying src/glypy/_c/compat.pxd -> build/lib.linux-x86_64-3.9/glypy/_c
copying src/glypy/_c/utils.c -> build/lib.linux-x86_64-3.9/glypy/_c
copying src/glypy/_c/utils.pxd -> build/lib.linux-x86_64-3.9/glypy/_c
copying src/glypy/_c/utils.pyx -> build/lib.linux-x86_64-3.9/glypy/_c
creating build/lib.linux-x86_64-3.9/glypy/io/data
copying src/glypy/io/data/enzyme.json -> build/lib.linux-x86_64-3.9/glypy/io/data
copying src/glypy/io/data/glycan.owl -> build/lib.linux-x86_64-3.9/glypy/io/data
copying src/glypy/composition/ccomposition.c -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/ccomposition.pxd -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/ccomposition.pyx -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/compat.h -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/composition/compat.pxd -> build/lib.linux-x86_64-3.9/glypy/composition
copying src/glypy/utils/cenum.c -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/cenum.pxd -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/utils/cenum.pyx -> build/lib.linux-x86_64-3.9/glypy/utils
copying src/glypy/_c/structure/base.pxd -> build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/base.pyx -> build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/glycan_composition.c -> build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/glycan_composition.pxd -> build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/glycan_composition.pyx -> build/lib.linux-x86_64-3.9/glypy/_c/structure
copying src/glypy/_c/structure/monosaccharide.pxd -> build/lib.linux-x86_64-3.9/glypy/_c/structure
creating build/lib.linux-x86_64-3.9/glypy/io/nomenclature/data
copying src/glypy/io/nomenclature/data/monosaccharide_schematic.json -> build/lib.linux-x86_64-3.9/glypy/io/nomenclature/data
copying src/glypy/io/nomenclature/data/monosaccharide_synonyms.json -> build/lib.linux-x86_64-3.9/glypy/io/nomenclature/data
running build_ext
building 'glypy.composition.ccomposition' extension
creating build/temp.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9/src
creating build/temp.linux-x86_64-3.9/src/glypy
creating build/temp.linux-x86_64-3.9/src/glypy/composition
gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -D_GNU_SOURCE -fPIC -fwrapv -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Isrc/glypy/_c/ -I/usr/include/python3.9 -c src/glypy/composition/ccomposition.c -o build/temp.linux-x86_64-3.9/src/glypy/composition/ccomposition.o
In file included from src/glypy/composition/ccomposition.c:766:
src/glypy/composition/compat.h:38: warning: "PyInt_Check" redefined
   38 | #define PyInt_Check PyLong_Check
      | 
src/glypy/composition/ccomposition.c:673: note: this is the location of the previous definition
  673 |   #define PyInt_Check(op)              PyLong_Check(op)
      | 
In file included from src/glypy/composition/ccomposition.c:766:
src/glypy/composition/compat.h:39: warning: "PyInt_CheckExact" redefined
   39 | #define PyInt_CheckExact PyLong_CheckExact
      | 
src/glypy/composition/ccomposition.c:674: note: this is the location of the previous definition
  674 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
      | 
src/glypy/composition/ccomposition.c: In function ‘__pyx_f_5glypy_11composition_12ccomposition_composition_sum’:
src/glypy/composition/ccomposition.c:9125:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
 9125 |   for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) {
      |                                 ^
gcc -shared -g -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-x86_64-3.9/src/glypy/composition/ccomposition.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/glypy/composition/ccomposition.cpython-39-x86_64-linux-gnu.so
building 'glypy.utils.cenum' extension
creating build/temp.linux-x86_64-3.9/src/glypy/utils
gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -D_GNU_SOURCE -fPIC -fwrapv -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Isrc/glypy/_c/ -I/usr/include/python3.9 -c src/glypy/utils/cenum.c -o build/temp.linux-x86_64-3.9/src/glypy/utils/cenum.o
gcc -shared -g -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-x86_64-3.9/src/glypy/utils/cenum.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/glypy/utils/cenum.cpython-39-x86_64-linux-gnu.so
building 'glypy._c.utils' extension
creating build/temp.linux-x86_64-3.9/src/glypy/_c
gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -D_GNU_SOURCE -fPIC -fwrapv -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Isrc/glypy/_c/ -I/usr/include/python3.9 -c src/glypy/_c/utils.c -o build/temp.linux-x86_64-3.9/src/glypy/_c/utils.o
In file included from src/glypy/_c/utils.c:766:
src/glypy/_c/compat.h:38: warning: "PyInt_Check" redefined
   38 | #define PyInt_Check PyLong_Check
      | 
src/glypy/_c/utils.c:673: note: this is the location of the previous definition
  673 |   #define PyInt_Check(op)              PyLong_Check(op)
      | 
In file included from src/glypy/_c/utils.c:766:
src/glypy/_c/compat.h:39: warning: "PyInt_CheckExact" redefined
   39 | #define PyInt_CheckExact PyLong_CheckExact
      | 
src/glypy/_c/utils.c:674: note: this is the location of the previous definition
  674 |   #define PyInt_CheckExact(op)         PyLong_CheckExact(op)
      | 
src/glypy/_c/utils.c: In function ‘__pyx_f_5glypy_2_c_5utils_parse_name_count’:
src/glypy/_c/utils.c:1407:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 1407 |   __pyx_v_cstring = PyStr_AsUTF8AndSize(__pyx_v_string, (&__pyx_v_n));
      |                   ^
src/glypy/_c/utils.c:1438:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
 1438 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
      |                                 ^
src/glypy/_c/utils.c:1454:29: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
 1454 |     __pyx_t_5 = ((__pyx_v_i < __pyx_v_n) != 0);
      |                             ^
src/glypy/_c/utils.c: In function ‘__pyx_f_5glypy_2_c_5utils_get_parse_tokens’:
src/glypy/_c/utils.c:1689:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 1689 |   __pyx_v_cstring = PyStr_AsUTF8AndSize(((PyObject*)__pyx_v_string), (&__pyx_v_n));
      |                   ^
src/glypy/_c/utils.c:1847:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘long int’} [-Wsign-compare]
 1847 |     for (__pyx_t_7 = 1; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) {
      |                                   ^
src/glypy/_c/utils.c: In function ‘__pyx_f_5glypy_2_c_5utils_init_str_ints’:
src/glypy/_c/utils.c:2209:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 2209 |   __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
      |                 ^
src/glypy/_c/utils.c: In function ‘__pyx_f_5glypy_2_c_5utils_get_str_int’:
src/glypy/_c/utils.c:2447:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 2447 | __pyx_v_atemp = PyStr_AsUTF8AndSize(__pyx_v_pa, (&__pyx_v_z));
      |               ^
src/glypy/_c/utils.c: In function ‘__pyx_f_5glypy_2_c_5utils__prepare_glycan_composition_string’:
src/glypy/_c/utils.c:2945:39: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers]
 2945 |     (__pyx_v_cells[__pyx_v_j]).string = PyStr_AsUTF8AndSize(__pyx_v_name, (&(__pyx_v_cells[__pyx_v_j]).size));
      |                                       ^
src/glypy/_c/utils.c:3219:15: warning: ‘__pyx_v_int_conv.size’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 3219 |     __pyx_v_k = (__pyx_v_k + __pyx_v_int_conv.size);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -shared -g -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-x86_64-3.9/src/glypy/_c/utils.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/glypy/_c/utils.cpython-39-x86_64-linux-gnu.so
building 'glypy._c.structure.glycan_composition' extension
creating build/temp.linux-x86_64-3.9/src/glypy/_c/structure
gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -D_GNU_SOURCE -fPIC -fwrapv -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Isrc/glypy/_c/ -I/usr/include/python3.9 -c src/glypy/_c/structure/glycan_composition.c -o build/temp.linux-x86_64-3.9/src/glypy/_c/structure/glycan_composition.o
gcc -shared -g -g -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection build/temp.linux-x86_64-3.9/src/glypy/_c/structure/glycan_composition.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/glypy/_c/structure/glycan_composition.cpython-39-x86_64-linux-gnu.so
+ sleep 1
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.uJGfZr
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
++ dirname /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
+ cd glypy-1.0.8
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection '
+ LDFLAGS='-Wl,-z,relro   -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld'
+ /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
No Cython
running install
/usr/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running install_lib
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
copying build/lib.linux-x86_64-3.9/glypy/algorithms/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
copying build/lib.linux-x86_64-3.9/glypy/algorithms/storage.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
copying build/lib.linux-x86_64-3.9/glypy/algorithms/canonicalize.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search
copying build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search
copying build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search/inclusion.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search
copying build/lib.linux-x86_64-3.9/glypy/algorithms/subtree_search/common_subgraph.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search
copying build/lib.linux-x86_64-3.9/glypy/algorithms/similarity.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
copying build/lib.linux-x86_64-3.9/glypy/algorithms/database.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms
copying build/lib.linux-x86_64-3.9/glypy/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/constants.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/crossring_fragments.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/modification.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/data
copying build/lib.linux-x86_64-3.9/glypy/structure/data/glycans.hjson -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/data
copying build/lib.linux-x86_64-3.9/glypy/structure/data/motifs.hjson -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/data
copying build/lib.linux-x86_64-3.9/glypy/structure/data/monosaccharides.hjson -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/data
copying build/lib.linux-x86_64-3.9/glypy/structure/link.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/substituent.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/base.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/named_structures.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/fragment.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/glycan_composition.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/stereochemistry.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/monosaccharide.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/structure/glycan.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure
copying build/lib.linux-x86_64-3.9/glypy/version.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/base.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/glycan_composition.pyx -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/glycan_composition.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/glycan_composition.c -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/base.pyx -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/glycan_composition.cpython-39-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/structure/monosaccharide.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure
copying build/lib.linux-x86_64-3.9/glypy/_c/compat.h -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/compat.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/utils.c -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/utils.pyx -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/utils.cpython-39-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
copying build/lib.linux-x86_64-3.9/glypy/_c/utils.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/geometry.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/symbolic_nomenclature.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/cfg_symbols.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/fragment_annotation.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/snfg_symbols.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/topological_layout.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/common.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/iupac_symbols.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/draw_tree.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
copying build/lib.linux-x86_64-3.9/glypy/plot/buchheim.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/byonic.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/glycoct_xml.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/glycomedb.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/linear_code.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/glycoct.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/tree_builder_utils.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/file_utils.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/data
copying build/lib.linux-x86_64-3.9/glypy/io/data/glycan.owl -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/data
copying build/lib.linux-x86_64-3.9/glypy/io/data/enzyme.json -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/data
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature
copying build/lib.linux-x86_64-3.9/glypy/io/nomenclature/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/data
copying build/lib.linux-x86_64-3.9/glypy/io/nomenclature/data/monosaccharide_synonyms.json -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/data
copying build/lib.linux-x86_64-3.9/glypy/io/nomenclature/data/monosaccharide_schematic.json -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/data
copying build/lib.linux-x86_64-3.9/glypy/io/nomenclature/identity.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature
copying build/lib.linux-x86_64-3.9/glypy/io/nomenclature/synonyms.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/carbon_descriptors.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/basetype_conversion.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/utils.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/writer.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/substituent_conversion.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/node_type.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/wurcs/parser.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs
copying build/lib.linux-x86_64-3.9/glypy/io/glyspace.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/gws.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/cfg.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/format_constants_map.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/_glycordf.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/iupac.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/glyconnect.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
copying build/lib.linux-x86_64-3.9/glypy/io/monosaccharidedb.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/ccomposition.cpython-39-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/compat.h -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/molecular_graph.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/composition_transform.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/compat.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/ccomposition.pyx -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/structure_composition.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/composition.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/ccomposition.c -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/mass_dict.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/base.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/atomic_data.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
copying build/lib.linux-x86_64-3.9/glypy/composition/ccomposition.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/multimap.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/cenum.pxd -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/cenum.cpython-39-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/compat.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/cenum.pyx -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/base.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/lazy.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/enum.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
copying build/lib.linux-x86_64-3.9/glypy/utils/cenum.c -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils
creating /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
copying build/lib.linux-x86_64-3.9/glypy/enzyme/__init__.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
copying build/lib.linux-x86_64-3.9/glypy/enzyme/pathways.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
copying build/lib.linux-x86_64-3.9/glypy/enzyme/glycome.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
copying build/lib.linux-x86_64-3.9/glypy/enzyme/graph.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
copying build/lib.linux-x86_64-3.9/glypy/enzyme/ec.py -> /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/storage.py to storage.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/canonicalize.py to canonicalize.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search/inclusion.py to inclusion.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/subtree_search/common_subgraph.py to common_subgraph.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/similarity.py to similarity.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/algorithms/database.py to database.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/constants.py to constants.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/crossring_fragments.py to crossring_fragments.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/modification.py to modification.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/link.py to link.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/substituent.py to substituent.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/base.py to base.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/named_structures.py to named_structures.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/fragment.py to fragment.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/glycan_composition.py to glycan_composition.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/stereochemistry.py to stereochemistry.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/monosaccharide.py to monosaccharide.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/structure/glycan.py to glycan.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/version.py to version.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/geometry.py to geometry.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/symbolic_nomenclature.py to symbolic_nomenclature.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/cfg_symbols.py to cfg_symbols.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/fragment_annotation.py to fragment_annotation.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/snfg_symbols.py to snfg_symbols.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/topological_layout.py to topological_layout.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/common.py to common.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/iupac_symbols.py to iupac_symbols.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/draw_tree.py to draw_tree.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/plot/buchheim.py to buchheim.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/byonic.py to byonic.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/glycoct_xml.py to glycoct_xml.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/glycomedb.py to glycomedb.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/linear_code.py to linear_code.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/glycoct.py to glycoct.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/tree_builder_utils.py to tree_builder_utils.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/file_utils.py to file_utils.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/identity.py to identity.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/nomenclature/synonyms.py to synonyms.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/carbon_descriptors.py to carbon_descriptors.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/basetype_conversion.py to basetype_conversion.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/utils.py to utils.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/writer.py to writer.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/substituent_conversion.py to substituent_conversion.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/node_type.py to node_type.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/wurcs/parser.py to parser.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/glyspace.py to glyspace.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/gws.py to gws.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/cfg.py to cfg.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/format_constants_map.py to format_constants_map.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/_glycordf.py to _glycordf.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/iupac.py to iupac.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/glyconnect.py to glyconnect.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/io/monosaccharidedb.py to monosaccharidedb.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/molecular_graph.py to molecular_graph.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/composition_transform.py to composition_transform.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/structure_composition.py to structure_composition.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/composition.py to composition.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/mass_dict.py to mass_dict.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/base.py to base.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/atomic_data.py to atomic_data.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/multimap.py to multimap.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/compat.py to compat.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/base.py to base.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/lazy.py to lazy.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/enum.py to enum.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme/__init__.py to __init__.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme/pathways.py to pathways.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme/glycome.py to glycome.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme/graph.py to graph.cpython-39.pyc
byte-compiling /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/enzyme/ec.py to ec.cpython-39.pyc
writing byte-compilation script '/tmp/tmpjx0htu1j.py'
/usr/bin/python3 /tmp/tmpjx0htu1j.py
removing /tmp/tmpjx0htu1j.py
running install_egg_info
running egg_info
writing src/glypy.egg-info/PKG-INFO
writing dependency_links to src/glypy.egg-info/dependency_links.txt
writing requirements to src/glypy.egg-info/requires.txt
writing top-level names to src/glypy.egg-info/top_level.txt
reading manifest file 'src/glypy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.ttl' under directory 'src/glypy/io/data'
warning: no files found matching '*.hjson' under directory 'src/glypy/io/nomenclature/data'
adding license file 'LICENSE'
adding license file 'NOTICE'
writing manifest file 'src/glypy.egg-info/SOURCES.txt'
Copying src/glypy.egg-info to /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy-1.0.8-py3.9.egg-info
running install_scripts
+ install -d -m755 /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64//usr/share/doc/python-glypy
+ '[' -d doc ']'
+ '[' -d docs ']'
+ '[' -d example ']'
+ '[' -d examples ']'
+ pushd /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
~/build/BUILDROOT/python-glypy-1.0.8-1.x86_64 ~/build/BUILD/glypy-1.0.8
+ '[' -d usr/lib ']'
+ '[' -d usr/lib64 ']'
+ find usr/lib64 -type f -printf '/%h/%f\n'
+ '[' -d usr/bin ']'
+ '[' -d usr/sbin ']'
+ touch doclist.lst
+ '[' -d usr/share/man ']'
+ popd
~/build/BUILD/glypy-1.0.8
+ mv /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/filelist.lst .
+ mv /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/doclist.lst .
+ /usr/bin/find-debuginfo -j4 --strict-build-id -i --build-id-seed 1.0.8-1 --unique-debug-suffix -1.0.8-1.x86_64 --unique-debug-src-base python-glypy-1.0.8-1.x86_64 -S debugsourcefiles.list /builddir/build/BUILD/glypy-1.0.8
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/utils.cpython-39-x86_64-linux-gnu.so
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure/glycan_composition.cpython-39-x86_64-linux-gnu.so
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/ccomposition.cpython-39-x86_64-linux-gnu.so
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/cenum.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/utils.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/composition/ccomposition.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/_c/structure/glycan_composition.cpython-39-x86_64-linux-gnu.so
extracting debug info from /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9/site-packages/glypy/utils/cenum.cpython-39-x86_64-linux-gnu.so
3232 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1
Bytecompiling .py files below /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib64/python3.9 using /usr/bin/python3.9
Bytecompiling .py files below /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64/usr/lib/debug/usr/lib64/python3.9 using /usr/bin/python3.9
+ /usr/lib/rpm/brp-python-hardlink
Processing files: python3-glypy-1.0.8-1.x86_64
Provides: python-glypy python3-glypy = 1.0.8-1 python3-glypy(x86-64) = 1.0.8-1 python3.9dist(glypy) = 1.0.8 python3dist(glypy) = 1.0.8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.4)(64bit) python(abi) = 3.9 python3.9dist(hjson) python3.9dist(six) rtld(GNU_HASH)
Processing files: python-glypy-help-1.0.8-1.x86_64
warning: Empty %files file /builddir/build/BUILD/glypy-1.0.8/doclist.lst
Provides: python-glypy-help = 1.0.8-1 python-glypy-help(x86-64) = 1.0.8-1 python3-glypy-doc
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python-glypy-debuginfo-1.0.8-1.x86_64
Provides: python-glypy-debuginfo = 1.0.8-1 python-glypy-debuginfo(x86-64) = 1.0.8-1
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: python-glypy-debugsource(x86-64) = 1.0.8-1
Processing files: python-glypy-debugsource-1.0.8-1.x86_64
Provides: python-glypy-debugsource = 1.0.8-1 python-glypy-debugsource(x86-64) = 1.0.8-1
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
Wrote: /builddir/build/RPMS/python-glypy-help-1.0.8-1.x86_64.rpm
Wrote: /builddir/build/RPMS/python-glypy-debugsource-1.0.8-1.x86_64.rpm
Wrote: /builddir/build/RPMS/python-glypy-debuginfo-1.0.8-1.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-glypy-1.0.8-1.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.4rFdzL
+ umask 022
+ cd /builddir/build/BUILD
+ cd glypy-1.0.8
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/python-glypy-1.0.8-1.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0