Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1684417651.065533/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-ariba-2.14.6-1.src.rpm Child return code was: 0 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1684417651.065533/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-ariba-2.14.6-1.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1684417651.065533/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Hy0JYP + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ariba-2.14.6 + /usr/bin/gzip -dc /builddir/build/SOURCES/ariba-2.14.6.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd ariba-2.14.6 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ERGTmU + umask 022 + cd /builddir/build/BUILD + cd ariba-2.14.6 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_py creating build creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/ariba copying ariba/faidx.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/summary_cluster_variant.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/ref_genes_getter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/scaffold_graph.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/flag.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/common.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/read_store.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/samtools_variants.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/megares_zip_parser.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/mic_plotter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/histogram.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/megares_data_finder.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/tb.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/summary.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/vfdb_parser.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/sequence_metadata.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/refdata_query.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/reference_data.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/report_flag_expander.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/__init__.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/bam_parse.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/link.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/versions.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/cluster.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/mlst_profile.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/external_progs.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/mapping.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/pubmlst_getter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/ref_preparer.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/pubmlst_ref_preparer.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/cdhit.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/clusters.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/ref_seq_chooser.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/card_record.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/assembly_variants.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/read_filter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/report_filter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/report.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/summary_sample.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/assembly.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/aln_to_metadata.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/assembly_compare.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/summary_cluster.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/mlst_reporter.py -> build/lib.linux-x86_64-3.9/ariba copying ariba/sequence_variant.py -> build/lib.linux-x86_64-3.9/ariba creating build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/prepareref_tb.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/pubmlstspecies.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/flag.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/pubmlstget.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/version.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/getref.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/expandflag.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/summary.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/micplot.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/refquery.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/test.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/__init__.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/run.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/prepareref.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/reportfilter.py -> build/lib.linux-x86_64-3.9/ariba/tasks copying ariba/tasks/aln2meta.py -> build/lib.linux-x86_64-3.9/ariba/tasks creating build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/pubmlst_getter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/summary_cluster_variant_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/assembly_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/samtools_variants_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/ref_genes_getter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/ref_seq_chooser_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/mlst_reporter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/flag_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/pubmlst_ref_preparer_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/ref_preparer_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/mic_plotter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/assembly_compare_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/megares_zip_parser_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/summary_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/scaffold_graph_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/test_refdata_query.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/report_filter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/megares_data_finder_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/tb_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/__init__.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/ncbi_getter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/common_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/card_record_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/cluster_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/reference_data_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/versions_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/bam_parse_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/sequence_metadata_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/histogram_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/link_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/read_filter_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/cdhit_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/report_flag_expander_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/assembly_variants_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/read_store_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/mapping_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/sequence_variant_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/mlst_profile_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/vfdb_parser_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/summary_cluster_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/external_progs_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/summary_sample_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/clusters_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/aln_to_metadata_test.py -> build/lib.linux-x86_64-3.9/ariba/tests copying ariba/tests/faidx_test.py -> build/lib.linux-x86_64-3.9/ariba/tests creating build/lib.linux-x86_64-3.9/ariba/test_run_data copying ariba/test_run_data/ref_fasta_to_make_reads_from.fa -> build/lib.linux-x86_64-3.9/ariba/test_run_data copying ariba/test_run_data/reads_1.fq -> build/lib.linux-x86_64-3.9/ariba/test_run_data copying ariba/test_run_data/reads_2.fq -> build/lib.linux-x86_64-3.9/ariba/test_run_data copying ariba/test_run_data/ref_seqs.fa -> build/lib.linux-x86_64-3.9/ariba/test_run_data copying ariba/test_run_data/metadata.tsv -> build/lib.linux-x86_64-3.9/ariba/test_run_data creating build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/NC_000962.3.fa.gz -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20181221.txt -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/NC_000962.3.gb -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20181115.json -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20190102.txt -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20181115.txt -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20190102.json -> build/lib.linux-x86_64-3.9/ariba/tb_data copying ariba/tb_data/panel.20181221.json -> build/lib.linux-x86_64-3.9/ariba/tb_data running build_ext building 'minimap_ariba' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/ariba creating build/temp.linux-x86_64-3.9/ariba/ext creating build/temp.linux-x86_64-3.9/third_party creating build/temp.linux-x86_64-3.9/third_party/minimap-0.2 gcc -Wno-unused-result -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -D_GNU_SOURCE -fPIC -fwrapv -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -D_GNU_SOURCE -fPIC -fwrapv -fstack-protector-strong -D_FORTIFY_SOURCE=2 -O2 -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -Ithird_party/minimap-0.2 -I/usr/include/python3.9 -c ariba/ext/minimap_ariba.cpp -o build/temp.linux-x86_64-3.9/ariba/ext/minimap_ariba.o ariba/ext/minimap_ariba.cpp:9:10: fatal error: zlib.h: No such file or directory 9 | #include | ^~~~~~~~ compilation terminated. error: command '/usr/bin/gcc' failed with exit code 1 error: Bad exit status from /var/tmp/rpm-tmp.ERGTmU (%build) Bad exit status from /var/tmp/rpm-tmp.ERGTmU (%build) RPM build errors: Child return code was: 1 EXCEPTION: [Error('Command failed: \n # bash --login -c /usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec\n', 1)] Traceback (most recent call last): File "/usr/lib/python3.11/site-packages/mockbuild/trace_decorator.py", line 93, in trace result = func(*args, **kw) ^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.11/site-packages/mockbuild/util.py", line 598, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-ariba.spec