%global _empty_manifest_terminate_build 0 Name: python-amphipathic Version: 1.0.11 Release: 1 Summary: This is a library to evaluate an aminoacid sequence and determine an amphipathic index for each alpha helix or beta sheet. License: MIT URL: https://github.com/ecolell/amphipathic Source0: https://mirrors.nju.edu.cn/pypi/web/packages/ad/36/4652c6e01ba03c348529ea7c6082e76d19cbc130d5c02af89a94eed66a10/amphipathic-1.0.11.tar.gz BuildArch: noarch Requires: python3-beautifulsoup4 Requires: python3-biopython Requires: python3-cachetools Requires: python3-ndg-httpsclient Requires: python3-pyOpenSSL Requires: python3-pyasn1 Requires: python3-requests[security] %description [![License](https://img.shields.io/pypi/l/amphipathic.svg)](https://raw.githubusercontent.com/ecolell/amphipathic/master/LICENSE) [![Downloads](https://img.shields.io/pypi/dm/amphipathic.svg)](https://pypi.python.org/pypi/amphipathic/) [![Build Status](https://travis-ci.org/ecolell/amphipathic.svg?branch=master)](https://travis-ci.org/ecolell/amphipathic) [![Coverage Status](https://coveralls.io/repos/ecolell/amphipathic/badge.png)](https://coveralls.io/r/ecolell/amphipathic) [![PyPI version](https://badge.fury.io/py/amphipathic.svg)](http://badge.fury.io/py/amphipathic) This library can analyze an aminoacid sequence and gives a list of secondary structures with the respective hydrophobicity mean[1] and amphipathic index[1]. When it is useful to calculate this measurements on a secondary structure? By looking into this measurements for an alpha helix, you can test some hiphotesis related with: 1. the context of a **globular soluble protein**: - **hydrofobic core**, it will be no amphipathic and hydrophobic - **interface between core and the superficial region**, it will be amphiphatic - **superficial region**, it will be no amphipathic and hydrophilic 2. the interactions of a **trans-membrane protein**: - **on lipids interaction**, it will be not amphipathic and hidrophobic - **on multiple trans-membrane helix interacion** (homomeric or heteromeric), it will be amphipathic building like an *ionic channel*. %package -n python3-amphipathic Summary: This is a library to evaluate an aminoacid sequence and determine an amphipathic index for each alpha helix or beta sheet. Provides: python-amphipathic BuildRequires: python3-devel BuildRequires: python3-setuptools BuildRequires: python3-pip %description -n python3-amphipathic [![License](https://img.shields.io/pypi/l/amphipathic.svg)](https://raw.githubusercontent.com/ecolell/amphipathic/master/LICENSE) [![Downloads](https://img.shields.io/pypi/dm/amphipathic.svg)](https://pypi.python.org/pypi/amphipathic/) [![Build Status](https://travis-ci.org/ecolell/amphipathic.svg?branch=master)](https://travis-ci.org/ecolell/amphipathic) [![Coverage Status](https://coveralls.io/repos/ecolell/amphipathic/badge.png)](https://coveralls.io/r/ecolell/amphipathic) [![PyPI version](https://badge.fury.io/py/amphipathic.svg)](http://badge.fury.io/py/amphipathic) This library can analyze an aminoacid sequence and gives a list of secondary structures with the respective hydrophobicity mean[1] and amphipathic index[1]. When it is useful to calculate this measurements on a secondary structure? By looking into this measurements for an alpha helix, you can test some hiphotesis related with: 1. the context of a **globular soluble protein**: - **hydrofobic core**, it will be no amphipathic and hydrophobic - **interface between core and the superficial region**, it will be amphiphatic - **superficial region**, it will be no amphipathic and hydrophilic 2. the interactions of a **trans-membrane protein**: - **on lipids interaction**, it will be not amphipathic and hidrophobic - **on multiple trans-membrane helix interacion** (homomeric or heteromeric), it will be amphipathic building like an *ionic channel*. %package help Summary: Development documents and examples for amphipathic Provides: python3-amphipathic-doc %description help [![License](https://img.shields.io/pypi/l/amphipathic.svg)](https://raw.githubusercontent.com/ecolell/amphipathic/master/LICENSE) [![Downloads](https://img.shields.io/pypi/dm/amphipathic.svg)](https://pypi.python.org/pypi/amphipathic/) [![Build Status](https://travis-ci.org/ecolell/amphipathic.svg?branch=master)](https://travis-ci.org/ecolell/amphipathic) [![Coverage Status](https://coveralls.io/repos/ecolell/amphipathic/badge.png)](https://coveralls.io/r/ecolell/amphipathic) [![PyPI version](https://badge.fury.io/py/amphipathic.svg)](http://badge.fury.io/py/amphipathic) This library can analyze an aminoacid sequence and gives a list of secondary structures with the respective hydrophobicity mean[1] and amphipathic index[1]. When it is useful to calculate this measurements on a secondary structure? By looking into this measurements for an alpha helix, you can test some hiphotesis related with: 1. the context of a **globular soluble protein**: - **hydrofobic core**, it will be no amphipathic and hydrophobic - **interface between core and the superficial region**, it will be amphiphatic - **superficial region**, it will be no amphipathic and hydrophilic 2. the interactions of a **trans-membrane protein**: - **on lipids interaction**, it will be not amphipathic and hidrophobic - **on multiple trans-membrane helix interacion** (homomeric or heteromeric), it will be amphipathic building like an *ionic channel*. %prep %autosetup -n amphipathic-1.0.11 %build %py3_build %install %py3_install install -d -m755 %{buildroot}/%{_pkgdocdir} if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi pushd %{buildroot} if [ -d usr/lib ]; then find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/lib64 ]; then find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/bin ]; then find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst fi if [ -d usr/sbin ]; then find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst fi touch doclist.lst if [ -d usr/share/man ]; then find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst fi popd mv %{buildroot}/filelist.lst . mv %{buildroot}/doclist.lst . %files -n python3-amphipathic -f filelist.lst %dir %{python3_sitelib}/* %files help -f doclist.lst %{_docdir}/* %changelog * Tue May 30 2023 Python_Bot - 1.0.11-1 - Package Spec generated