Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-aarch64-1686319097.342337/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: aarch64 Building for target aarch64 Wrote: /builddir/build/SRPMS/python-genmod-3.7.4-1.src.rpm Child return code was: 0 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-aarch64-1686319097.342337/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: aarch64 Building for target aarch64 Wrote: /builddir/build/SRPMS/python-genmod-3.7.4-1.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-aarch64-1686319097.342337/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/python-genmod.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: aarch64 Building for target aarch64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.PT59CG + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf genmod-3.7.4 + /usr/bin/gzip -dc /builddir/build/SOURCES/genmod-3.7.4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd genmod-3.7.4 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.D1STgJ + umask 022 + cd /builddir/build/BUILD + cd genmod-3.7.4 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' /usr/lib/python3.9/site-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running build running build_py creating build creating build/lib creating build/lib/genmod copying genmod/__init__.py -> build/lib/genmod copying genmod/log.py -> build/lib/genmod creating build/lib/genmod/vcf_tools copying genmod/vcf_tools/check_info_header.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/header_parser.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/print_headers.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/sort_variants.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/get_genotypes.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/add_variant_information.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/print_variants.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/parse_variant.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/add_metadata.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/__init__.py -> build/lib/genmod/vcf_tools copying genmod/vcf_tools/genotype.py -> build/lib/genmod/vcf_tools creating build/lib/genmod/errors copying genmod/errors/warning.py -> build/lib/genmod/errors copying genmod/errors/__init__.py -> build/lib/genmod/errors creating build/lib/genmod/utils copying genmod/utils/get_priority.py -> build/lib/genmod/utils copying genmod/utils/get_batches.py -> build/lib/genmod/utils copying genmod/utils/is_number.py -> build/lib/genmod/utils copying genmod/utils/check_individuals.py -> build/lib/genmod/utils copying genmod/utils/pair_generator.py -> build/lib/genmod/utils copying genmod/utils/variant_printer.py -> build/lib/genmod/utils copying genmod/utils/__init__.py -> build/lib/genmod/utils copying genmod/utils/get_features.py -> build/lib/genmod/utils creating build/lib/genmod/score_variants copying genmod/score_variants/config_parser.py -> build/lib/genmod/score_variants copying genmod/score_variants/score_variant.py -> build/lib/genmod/score_variants copying genmod/score_variants/check_plugins.py -> build/lib/genmod/score_variants copying genmod/score_variants/__init__.py -> build/lib/genmod/score_variants copying genmod/score_variants/score_function.py -> build/lib/genmod/score_variants copying genmod/score_variants/compound_scorer.py -> build/lib/genmod/score_variants creating build/lib/genmod/annotate_variants copying genmod/annotate_variants/annotate.py -> build/lib/genmod/annotate_variants copying genmod/annotate_variants/add_annotations.py -> build/lib/genmod/annotate_variants copying genmod/annotate_variants/read_tabix_files.py -> build/lib/genmod/annotate_variants copying genmod/annotate_variants/__init__.py -> build/lib/genmod/annotate_variants creating build/lib/genmod/commands copying genmod/commands/analyze.py -> build/lib/genmod/commands copying genmod/commands/annotate_models.py -> build/lib/genmod/commands copying genmod/commands/base.py -> build/lib/genmod/commands copying genmod/commands/utils.py -> build/lib/genmod/commands copying genmod/commands/genmod_sort.py -> build/lib/genmod/commands copying genmod/commands/filter_variants.py -> build/lib/genmod/commands copying genmod/commands/summarize_variants.py -> build/lib/genmod/commands copying genmod/commands/score_variants.py -> build/lib/genmod/commands copying genmod/commands/score_compounds.py -> build/lib/genmod/commands copying genmod/commands/annotate_variant.py -> build/lib/genmod/commands copying genmod/commands/__init__.py -> build/lib/genmod/commands creating build/lib/genmod/annotate_regions copying genmod/annotate_regions/parse_annotations.py -> build/lib/genmod/annotate_regions copying genmod/annotate_regions/__init__.py -> build/lib/genmod/annotate_regions copying genmod/annotate_regions/get_features.py -> build/lib/genmod/annotate_regions creating build/lib/genmod/annotations copying genmod/annotations/__init__.py -> build/lib/genmod/annotations creating build/lib/genmod/annotate_models copying genmod/annotate_models/fix_variant.py -> build/lib/genmod/annotate_models copying genmod/annotate_models/model_score.py -> build/lib/genmod/annotate_models copying genmod/annotate_models/variant_annotator.py -> build/lib/genmod/annotate_models copying genmod/annotate_models/genetic_models.py -> build/lib/genmod/annotate_models copying genmod/annotate_models/__init__.py -> build/lib/genmod/annotate_models copying genmod/annotate_models/make_haploblocks.py -> build/lib/genmod/annotate_models creating build/lib/genmod/annotate_models/models copying genmod/annotate_models/models/dominant_model.py -> build/lib/genmod/annotate_models/models copying genmod/annotate_models/models/x_models.py -> build/lib/genmod/annotate_models/models copying genmod/annotate_models/models/compound_model.py -> build/lib/genmod/annotate_models/models copying genmod/annotate_models/models/recessive_model.py -> build/lib/genmod/annotate_models/models copying genmod/annotate_models/models/__init__.py -> build/lib/genmod/annotate_models/models running egg_info writing genmod.egg-info/PKG-INFO writing dependency_links to genmod.egg-info/dependency_links.txt writing entry points to genmod.egg-info/entry_points.txt writing requirements to genmod.egg-info/requires.txt writing top-level names to genmod.egg-info/top_level.txt reading manifest file 'genmod.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' writing manifest file 'genmod.egg-info/SOURCES.txt' creating build/lib/genmod/configs copying genmod/configs/genmod_test.v1.5.ini -> build/lib/genmod/configs copying genmod/configs/rank_model_cmms_v1.7.ini -> build/lib/genmod/configs copying genmod/configs/rank_model_cmms_v1.9.ini -> build/lib/genmod/configs copying genmod/annotations/ensembl_genes_37.txt.gz -> build/lib/genmod/annotations copying genmod/annotations/ensembl_genes_38.txt.gz -> build/lib/genmod/annotations + sleep 1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zQD5pA + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 ++ dirname /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 + cd genmod-3.7.4 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 /usr/lib/python3.9/site-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running install /usr/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running install_lib creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9 creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/check_info_header.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/header_parser.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/print_headers.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/sort_variants.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/get_genotypes.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/add_variant_information.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/print_variants.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/parse_variant.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/add_metadata.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools copying build/lib/genmod/vcf_tools/genotype.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/errors copying build/lib/genmod/errors/warning.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/errors copying build/lib/genmod/errors/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/errors creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/get_priority.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/get_batches.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/is_number.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/check_individuals.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/pair_generator.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/variant_printer.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils copying build/lib/genmod/utils/get_features.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/config_parser.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/score_variant.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/check_plugins.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/score_function.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants copying build/lib/genmod/score_variants/compound_scorer.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants copying build/lib/genmod/annotate_variants/annotate.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants copying build/lib/genmod/annotate_variants/add_annotations.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants copying build/lib/genmod/annotate_variants/read_tabix_files.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants copying build/lib/genmod/annotate_variants/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/configs copying build/lib/genmod/configs/rank_model_cmms_v1.7.ini -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/configs copying build/lib/genmod/configs/rank_model_cmms_v1.9.ini -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/configs copying build/lib/genmod/configs/genmod_test.v1.5.ini -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/configs creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/analyze.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/annotate_models.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/base.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/utils.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/genmod_sort.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/filter_variants.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/summarize_variants.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/score_variants.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/score_compounds.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/annotate_variant.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands copying build/lib/genmod/commands/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions copying build/lib/genmod/annotate_regions/parse_annotations.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions copying build/lib/genmod/annotate_regions/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions copying build/lib/genmod/annotate_regions/get_features.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotations copying build/lib/genmod/annotations/ensembl_genes_37.txt.gz -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotations copying build/lib/genmod/annotations/ensembl_genes_38.txt.gz -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotations copying build/lib/genmod/annotations/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotations creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/annotate_models/fix_variant.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/annotate_models/model_score.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/annotate_models/variant_annotator.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/annotate_models/genetic_models.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models creating /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/models/dominant_model.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/models/x_models.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/models/compound_model.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/models/recessive_model.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/models/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models copying build/lib/genmod/annotate_models/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/annotate_models/make_haploblocks.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models copying build/lib/genmod/__init__.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod copying build/lib/genmod/log.py -> /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/check_info_header.py to check_info_header.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/header_parser.py to header_parser.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/print_headers.py to print_headers.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/sort_variants.py to sort_variants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/get_genotypes.py to get_genotypes.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/add_variant_information.py to add_variant_information.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/print_variants.py to print_variants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/parse_variant.py to parse_variant.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/add_metadata.py to add_metadata.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/vcf_tools/genotype.py to genotype.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/errors/warning.py to warning.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/errors/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/get_priority.py to get_priority.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/get_batches.py to get_batches.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/is_number.py to is_number.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/check_individuals.py to check_individuals.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/pair_generator.py to pair_generator.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/variant_printer.py to variant_printer.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/utils/get_features.py to get_features.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/config_parser.py to config_parser.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/score_variant.py to score_variant.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/check_plugins.py to check_plugins.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/score_function.py to score_function.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/score_variants/compound_scorer.py to compound_scorer.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants/annotate.py to annotate.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants/add_annotations.py to add_annotations.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants/read_tabix_files.py to read_tabix_files.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_variants/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/analyze.py to analyze.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/annotate_models.py to annotate_models.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/base.py to base.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/utils.py to utils.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/genmod_sort.py to genmod_sort.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/filter_variants.py to filter_variants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/summarize_variants.py to summarize_variants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/score_variants.py to score_variants.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/score_compounds.py to score_compounds.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/annotate_variant.py to annotate_variant.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/commands/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions/parse_annotations.py to parse_annotations.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_regions/get_features.py to get_features.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotations/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/fix_variant.py to fix_variant.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/model_score.py to model_score.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/variant_annotator.py to variant_annotator.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/genetic_models.py to genetic_models.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models/dominant_model.py to dominant_model.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models/x_models.py to x_models.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models/compound_model.py to compound_model.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models/recessive_model.py to recessive_model.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/models/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/annotate_models/make_haploblocks.py to make_haploblocks.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod/log.py to log.cpython-39.pyc writing byte-compilation script '/tmp/tmpi01g2bjo.py' /usr/bin/python3 /tmp/tmpi01g2bjo.py removing /tmp/tmpi01g2bjo.py running install_egg_info running egg_info writing genmod.egg-info/PKG-INFO writing dependency_links to genmod.egg-info/dependency_links.txt writing entry points to genmod.egg-info/entry_points.txt writing requirements to genmod.egg-info/requires.txt writing top-level names to genmod.egg-info/top_level.txt reading manifest file 'genmod.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '__pycache__' found under directory '*' warning: no previously-included files matching '*.py[co]' found under directory '*' writing manifest file 'genmod.egg-info/SOURCES.txt' Copying genmod.egg-info to /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9/site-packages/genmod-3.7.4-py3.9.egg-info running install_scripts Installing genmod script to /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/bin + install -d -m755 /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64//usr/share/doc/python-genmod + '[' -d doc ']' + '[' -d docs ']' + '[' -d example ']' + '[' -d examples ']' + cp -arf examples /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64//usr/share/doc/python-genmod + pushd /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 ~/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 ~/build/BUILD/genmod-3.7.4 + '[' -d usr/lib ']' + find usr/lib -type f -printf '"/%h/%f"\n' + '[' -d usr/lib64 ']' + '[' -d usr/bin ']' + find usr/bin -type f -printf '"/%h/%f"\n' + '[' -d usr/sbin ']' + touch doclist.lst + '[' -d usr/share/man ']' ~/build/BUILD/genmod-3.7.4 + popd + mv /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/filelist.lst . + mv /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/doclist.lst . + /usr/bin/find-debuginfo -j4 --strict-build-id -i --build-id-seed 3.7.4-1 --unique-debug-suffix -3.7.4-1.aarch64 --unique-debug-src-base python-genmod-3.7.4-1.aarch64 -S debugsourcefiles.list /builddir/build/BUILD/genmod-3.7.4 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 Bytecompiling .py files below /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64/usr/lib/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink Processing files: python3-genmod-3.7.4-1.noarch Provides: python-genmod python3-genmod = 3.7.4-1 python3.9dist(genmod) = 3.7.4 python3dist(genmod) = 3.7.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.9 python3.9dist(click) < 7 python3.9dist(configobj) python3.9dist(extract-vcf) >= 0.4.2 python3.9dist(interval-tree) >= 0.3.2 python3.9dist(intervaltree) python3.9dist(ped-parser) >= 1.6.2 python3.9dist(pytabix) python3.9dist(pytest) python3.9dist(setuptools) Processing files: python-genmod-help-3.7.4-1.noarch warning: Empty %files file /builddir/build/BUILD/genmod-3.7.4/doclist.lst Provides: python-genmod-help = 3.7.4-1 python3-genmod-doc Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 Wrote: /builddir/build/RPMS/python-genmod-help-3.7.4-1.noarch.rpm Wrote: /builddir/build/RPMS/python3-genmod-3.7.4-1.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.aY80Ey + umask 022 + cd /builddir/build/BUILD + cd genmod-3.7.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-genmod-3.7.4-1.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0