Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'], chrootPath='/var/lib/mock/openeuler-22.03-x86_64-1683344454.425707/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-relion-0.11.1-1.src.rpm Child return code was: 0 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'], chrootPath='/var/lib/mock/openeuler-22.03-x86_64-1683344454.425707/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-relion-0.11.1-1.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'], chrootPath='/var/lib/mock/openeuler-22.03-x86_64-1683344454.425707/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-relion.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.LY4fFn + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf relion-0.11.1 + /usr/bin/gzip -dc /builddir/build/SOURCES/relion-0.11.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd relion-0.11.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.OO92ou + umask 022 + cd /builddir/build/BUILD + cd relion-0.11.1 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' /usr/lib/python3.9/site-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'project-urls' will not be supported in future versions. Please use the underscore name 'project_urls' instead warnings.warn( running build running build_py creating build creating build/lib creating build/lib/relion copying src/relion/__init__.py -> build/lib/relion copying src/relion/parse_project.py -> build/lib/relion creating build/lib/relion/cli copying src/relion/cli/__init__.py -> build/lib/relion/cli copying src/relion/cli/pipeline_viewer.py -> build/lib/relion/cli copying src/relion/cli/current_job.py -> build/lib/relion/cli copying src/relion/cli/project_linker.py -> build/lib/relion/cli copying src/relion/cli/run_pipeline.py -> build/lib/relion/cli copying src/relion/cli/refine_pipeline.py -> build/lib/relion/cli copying src/relion/cli/print_default_options.py -> build/lib/relion/cli creating build/lib/relion/node copying src/relion/node/__init__.py -> build/lib/relion/node copying src/relion/node/environment.py -> build/lib/relion/node copying src/relion/node/graph.py -> build/lib/relion/node creating build/lib/relion/pipeline copying src/relion/pipeline/__init__.py -> build/lib/relion/pipeline copying src/relion/pipeline/extra_options.py -> build/lib/relion/pipeline copying src/relion/pipeline/options.py -> build/lib/relion/pipeline copying src/relion/pipeline/refine.py -> build/lib/relion/pipeline creating build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/__init__.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/icebreaker_histogram.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/cryolo_fine_tune_job.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/dls_options.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/cryolo_external_job.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/reconstruct_halves_external_job.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/mask_soft_edge_external_job.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/fsc_fitting_external_job.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/cryolo_relion_it.py -> build/lib/relion/cryolo_relion_it copying src/relion/cryolo_relion_it/select_and_split_external_job.py -> build/lib/relion/cryolo_relion_it creating build/lib/relion/zocalo copying src/relion/zocalo/__init__.py -> build/lib/relion/zocalo copying src/relion/zocalo/ctffind.py -> build/lib/relion/zocalo copying src/relion/zocalo/tomo_align.py -> build/lib/relion/zocalo copying src/relion/zocalo/wrapper.py -> build/lib/relion/zocalo copying src/relion/zocalo/images_service_plugin.py -> build/lib/relion/zocalo copying src/relion/zocalo/cryolo.py -> build/lib/relion/zocalo copying src/relion/zocalo/alchemy.py -> build/lib/relion/zocalo copying src/relion/zocalo/service.py -> build/lib/relion/zocalo copying src/relion/zocalo/motioncorr.py -> build/lib/relion/zocalo creating build/lib/relion/_parser copying src/relion/_parser/__init__.py -> build/lib/relion/_parser copying src/relion/_parser/ctffind.py -> build/lib/relion/_parser copying src/relion/_parser/autopick.py -> build/lib/relion/_parser copying src/relion/_parser/combine_star_files.py -> build/lib/relion/_parser copying src/relion/_parser/motioncorrection.py -> build/lib/relion/_parser copying src/relion/_parser/initialmodel.py -> build/lib/relion/_parser copying src/relion/_parser/processnode.py -> build/lib/relion/_parser copying src/relion/_parser/jobtype.py -> build/lib/relion/_parser copying src/relion/_parser/relativeicethickness.py -> build/lib/relion/_parser copying src/relion/_parser/cryolo.py -> build/lib/relion/_parser copying src/relion/_parser/class2D.py -> build/lib/relion/_parser copying src/relion/_parser/processgraph.py -> build/lib/relion/_parser copying src/relion/_parser/relion_pipeline.py -> build/lib/relion/_parser copying src/relion/_parser/class3D.py -> build/lib/relion/_parser copying src/relion/_parser/combine_star_job.py -> build/lib/relion/_parser creating build/lib/relion/dbmodel copying src/relion/dbmodel/__init__.py -> build/lib/relion/dbmodel copying src/relion/dbmodel/modeltables.py -> build/lib/relion/dbmodel copying src/relion/dbmodel/dbgraph.py -> build/lib/relion/dbmodel copying src/relion/dbmodel/dbnode.py -> build/lib/relion/dbmodel running egg_info writing src/relion.egg-info/PKG-INFO writing dependency_links to src/relion.egg-info/dependency_links.txt writing entry points to src/relion.egg-info/entry_points.txt writing requirements to src/relion.egg-info/requires.txt writing top-level names to src/relion.egg-info/top_level.txt reading manifest file 'src/relion.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'src/relion.egg-info/SOURCES.txt' + sleep 1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.CMNDVE + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 ++ dirname /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 + cd relion-0.11.1 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 /usr/lib/python3.9/site-packages/setuptools/dist.py:717: UserWarning: Usage of dash-separated 'project-urls' will not be supported in future versions. Please use the underscore name 'project_urls' instead warnings.warn( running install /usr/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running install_lib creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9 creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion copying build/lib/relion/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/pipeline_viewer.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/current_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/project_linker.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/run_pipeline.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/refine_pipeline.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/cli/print_default_options.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli copying build/lib/relion/parse_project.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node copying build/lib/relion/node/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node copying build/lib/relion/node/environment.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node copying build/lib/relion/node/graph.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline copying build/lib/relion/pipeline/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline copying build/lib/relion/pipeline/extra_options.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline copying build/lib/relion/pipeline/options.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline copying build/lib/relion/pipeline/refine.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/icebreaker_histogram.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/cryolo_fine_tune_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/dls_options.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/cryolo_external_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/reconstruct_halves_external_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/mask_soft_edge_external_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/fsc_fitting_external_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/cryolo_relion_it.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it copying build/lib/relion/cryolo_relion_it/select_and_split_external_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/ctffind.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/tomo_align.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/wrapper.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/images_service_plugin.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/cryolo.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/alchemy.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/service.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo copying build/lib/relion/zocalo/motioncorr.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/ctffind.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/autopick.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/combine_star_files.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/motioncorrection.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/initialmodel.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/processnode.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/jobtype.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/relativeicethickness.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/cryolo.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/class2D.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/processgraph.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/relion_pipeline.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/class3D.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser copying build/lib/relion/_parser/combine_star_job.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser creating /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel copying build/lib/relion/dbmodel/__init__.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel copying build/lib/relion/dbmodel/modeltables.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel copying build/lib/relion/dbmodel/dbgraph.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel copying build/lib/relion/dbmodel/dbnode.py -> /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/pipeline_viewer.py to pipeline_viewer.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/current_job.py to current_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/project_linker.py to project_linker.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/run_pipeline.py to run_pipeline.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/refine_pipeline.py to refine_pipeline.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cli/print_default_options.py to print_default_options.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/parse_project.py to parse_project.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node/environment.py to environment.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/node/graph.py to graph.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline/extra_options.py to extra_options.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline/options.py to options.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/pipeline/refine.py to refine.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/icebreaker_histogram.py to icebreaker_histogram.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/cryolo_fine_tune_job.py to cryolo_fine_tune_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/dls_options.py to dls_options.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/cryolo_external_job.py to cryolo_external_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/reconstruct_halves_external_job.py to reconstruct_halves_external_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/mask_soft_edge_external_job.py to mask_soft_edge_external_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/fsc_fitting_external_job.py to fsc_fitting_external_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/cryolo_relion_it.py to cryolo_relion_it.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/cryolo_relion_it/select_and_split_external_job.py to select_and_split_external_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/ctffind.py to ctffind.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/tomo_align.py to tomo_align.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/wrapper.py to wrapper.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/images_service_plugin.py to images_service_plugin.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/cryolo.py to cryolo.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/alchemy.py to alchemy.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/service.py to service.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/zocalo/motioncorr.py to motioncorr.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/ctffind.py to ctffind.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/autopick.py to autopick.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/combine_star_files.py to combine_star_files.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/motioncorrection.py to motioncorrection.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/initialmodel.py to initialmodel.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/processnode.py to processnode.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/jobtype.py to jobtype.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/relativeicethickness.py to relativeicethickness.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/cryolo.py to cryolo.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/class2D.py to class2D.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/processgraph.py to processgraph.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/relion_pipeline.py to relion_pipeline.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/class3D.py to class3D.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/_parser/combine_star_job.py to combine_star_job.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel/modeltables.py to modeltables.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel/dbgraph.py to dbgraph.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion/dbmodel/dbnode.py to dbnode.cpython-39.pyc writing byte-compilation script '/tmp/tmphpoqczvp.py' /usr/bin/python3 /tmp/tmphpoqczvp.py removing /tmp/tmphpoqczvp.py running install_egg_info running egg_info writing src/relion.egg-info/PKG-INFO writing dependency_links to src/relion.egg-info/dependency_links.txt writing entry points to src/relion.egg-info/entry_points.txt writing requirements to src/relion.egg-info/requires.txt writing top-level names to src/relion.egg-info/top_level.txt reading manifest file 'src/relion.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'src/relion.egg-info/SOURCES.txt' Copying src/relion.egg-info to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9/site-packages/relion-0.11.1-py3.9.egg-info running install_scripts Installing combine_star_files.py script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing external_job_fsc_fitting script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing external_job_mask_soft_edge script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing external_job_reconstruct_halves script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing external_job_select_and_split script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.job script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.link script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.print_options script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.run_pipeline script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.run_refine_pipeline script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin Installing relipy.show script to /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/bin + install -d -m755 /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64//usr/share/doc/python-relion + '[' -d doc ']' + '[' -d docs ']' + '[' -d example ']' + '[' -d examples ']' + pushd /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 ~/build/BUILDROOT/python-relion-0.11.1-1.x86_64 ~/build/BUILD/relion-0.11.1 + '[' -d usr/lib ']' + find usr/lib -type f -printf '/%h/%f\n' + '[' -d usr/lib64 ']' + '[' -d usr/bin ']' + find usr/bin -type f -printf '/%h/%f\n' + '[' -d usr/sbin ']' + touch doclist.lst + '[' -d usr/share/man ']' + popd ~/build/BUILD/relion-0.11.1 + mv /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/filelist.lst . + mv /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/doclist.lst . + /usr/bin/find-debuginfo -j4 --strict-build-id -i --build-id-seed 0.11.1-1 --unique-debug-suffix -0.11.1-1.x86_64 --unique-debug-src-base python-relion-0.11.1-1.x86_64 -S debugsourcefiles.list /builddir/build/BUILD/relion-0.11.1 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 Bytecompiling .py files below /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64/usr/lib/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink Processing files: python3-relion-0.11.1-1.noarch Provides: python-relion python3-relion = 0.11.1-1 python3.9dist(relion) = 0.11.1 python3dist(relion) = 0.11.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.9 python3.9dist(gemmi) python3.9dist(ispyb) python3.9dist(matplotlib) python3.9dist(mrcfile) python3.9dist(pandas) python3.9dist(pillow) python3.9dist(plotly) python3.9dist(procrunner) python3.9dist(pydantic) python3.9dist(pyyaml) python3.9dist(setuptools) python3.9dist(starfile) Processing files: python-relion-help-0.11.1-1.noarch warning: Empty %files file /builddir/build/BUILD/relion-0.11.1/doclist.lst Provides: python-relion-help = 0.11.1-1 python3-relion-doc Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 Wrote: /builddir/build/RPMS/python-relion-help-0.11.1-1.noarch.rpm Wrote: /builddir/build/RPMS/python3-relion-0.11.1-1.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.kCrPbU + umask 022 + cd /builddir/build/BUILD + cd relion-0.11.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-relion-0.11.1-1.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0