Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683726336.505188/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-bohra-2.2.1-1.src.rpm Child return code was: 0 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683726336.505188/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/python-bohra-2.2.1-1.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'], chrootPath='/var/lib/mock/openeuler-22.03_LTS_SP1-x86_64-1683726336.505188/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1000gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=True) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/python-bohra.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False /etc/profile.d/system-info.sh: line 55: ps: command not found Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.GS91z9 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf bohra-2.2.1 + /usr/bin/gzip -dc /builddir/build/SOURCES/bohra-2.2.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd bohra-2.2.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.vr3Pjv + umask 022 + cd /builddir/build/BUILD + cd bohra-2.2.1 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_py creating build creating build/lib creating build/lib/bohra copying bohra/__init__.py -> build/lib/bohra copying bohra/version.py -> build/lib/bohra copying bohra/bohra.py -> build/lib/bohra copying bohra/Utils.py -> build/lib/bohra copying bohra/CustomLog.py -> build/lib/bohra copying bohra/SnpDetection.py -> build/lib/bohra running egg_info writing bohra.egg-info/PKG-INFO writing dependency_links to bohra.egg-info/dependency_links.txt writing entry points to bohra.egg-info/entry_points.txt writing requirements to bohra.egg-info/requires.txt writing top-level names to bohra.egg-info/top_level.txt reading manifest file 'bohra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'bohra/modules/*' adding license file 'LICENSE.txt' writing manifest file 'bohra.egg-info/SOURCES.txt' copying bohra/main.nf -> build/lib/bohra copying bohra/nextflow.config -> build/lib/bohra creating build/lib/bohra/modules creating build/lib/bohra/modules/collation copying bohra/modules/collation/functions.nf -> build/lib/bohra/modules/collation copying bohra/modules/collation/main.nf -> build/lib/bohra/modules/collation creating build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/add_header_mlst.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/collate_asm.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/collate_kraken2.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/collate_plasmids.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/collate_stats.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/compile.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/snippy_qc.py -> build/lib/bohra/modules/collation/bin copying bohra/modules/collation/bin/wrangle_mobsuite.py -> build/lib/bohra/modules/collation/bin creating build/lib/bohra/modules/csvtk copying bohra/modules/csvtk/functions.nf -> build/lib/bohra/modules/csvtk copying bohra/modules/csvtk/main.nf -> build/lib/bohra/modules/csvtk copying bohra/modules/csvtk/meta.yml -> build/lib/bohra/modules/csvtk creating build/lib/bohra/modules/gubbins copying bohra/modules/gubbins/functions.nf -> build/lib/bohra/modules/gubbins copying bohra/modules/gubbins/main.nf -> build/lib/bohra/modules/gubbins copying bohra/modules/gubbins/meta.yml -> build/lib/bohra/modules/gubbins creating build/lib/bohra/modules/iqtree copying bohra/modules/iqtree/functions.nf -> build/lib/bohra/modules/iqtree copying bohra/modules/iqtree/main.nf -> build/lib/bohra/modules/iqtree copying bohra/modules/iqtree/meta.yml -> build/lib/bohra/modules/iqtree creating build/lib/bohra/modules/iqtree/bin copying bohra/modules/iqtree/bin/iqtree_generator.sh -> build/lib/bohra/modules/iqtree/bin creating build/lib/bohra/modules/kraken2 copying bohra/modules/kraken2/functions.nf -> build/lib/bohra/modules/kraken2 copying bohra/modules/kraken2/main.nf -> build/lib/bohra/modules/kraken2 copying bohra/modules/kraken2/meta.yml -> build/lib/bohra/modules/kraken2 creating build/lib/bohra/modules/mash creating build/lib/bohra/modules/mash/sketch copying bohra/modules/mash/sketch/functions.nf -> build/lib/bohra/modules/mash/sketch copying bohra/modules/mash/sketch/main.nf -> build/lib/bohra/modules/mash/sketch copying bohra/modules/mash/sketch/meta.yml -> build/lib/bohra/modules/mash/sketch creating build/lib/bohra/modules/mash/triangle copying bohra/modules/mash/triangle/functions.nf -> build/lib/bohra/modules/mash/triangle copying bohra/modules/mash/triangle/main.nf -> build/lib/bohra/modules/mash/triangle copying bohra/modules/mash/triangle/meta.yml -> build/lib/bohra/modules/mash/triangle creating build/lib/bohra/modules/mlst copying bohra/modules/mlst/functions.nf -> build/lib/bohra/modules/mlst copying bohra/modules/mlst/main.nf -> build/lib/bohra/modules/mlst copying bohra/modules/mlst/meta.yml -> build/lib/bohra/modules/mlst creating build/lib/bohra/modules/mobsuite copying bohra/modules/mobsuite/functions.nf -> build/lib/bohra/modules/mobsuite copying bohra/modules/mobsuite/main.nf -> build/lib/bohra/modules/mobsuite copying bohra/modules/mobsuite/meta.yml -> build/lib/bohra/modules/mobsuite creating build/lib/bohra/modules/panaroo copying bohra/modules/panaroo/functions.nf -> build/lib/bohra/modules/panaroo copying bohra/modules/panaroo/main.nf -> build/lib/bohra/modules/panaroo copying bohra/modules/panaroo/meta.yml -> build/lib/bohra/modules/panaroo creating build/lib/bohra/modules/prokka copying bohra/modules/prokka/functions.nf -> build/lib/bohra/modules/prokka copying bohra/modules/prokka/main.nf -> build/lib/bohra/modules/prokka copying bohra/modules/prokka/meta.yml -> build/lib/bohra/modules/prokka creating build/lib/bohra/modules/quicktree copying bohra/modules/quicktree/functions.nf -> build/lib/bohra/modules/quicktree copying bohra/modules/quicktree/main.nf -> build/lib/bohra/modules/quicktree copying bohra/modules/quicktree/meta.yml -> build/lib/bohra/modules/quicktree creating build/lib/bohra/modules/resistome copying bohra/modules/resistome/functions.nf -> build/lib/bohra/modules/resistome copying bohra/modules/resistome/main.nf -> build/lib/bohra/modules/resistome copying bohra/modules/resistome/meta.yml -> build/lib/bohra/modules/resistome creating build/lib/bohra/modules/resistome/bin copying bohra/modules/resistome/bin/combine.py -> build/lib/bohra/modules/resistome/bin copying bohra/modules/resistome/bin/concat.py -> build/lib/bohra/modules/resistome/bin copying bohra/modules/resistome/bin/meta.yaml -> build/lib/bohra/modules/resistome/bin creating build/lib/bohra/modules/roary2svg copying bohra/modules/roary2svg/functions.nf -> build/lib/bohra/modules/roary2svg copying bohra/modules/roary2svg/main.nf -> build/lib/bohra/modules/roary2svg copying bohra/modules/roary2svg/meta.yml -> build/lib/bohra/modules/roary2svg creating build/lib/bohra/modules/roary2svg/bin copying bohra/modules/roary2svg/bin/roary2svg.pl -> build/lib/bohra/modules/roary2svg/bin creating build/lib/bohra/modules/seqkit creating build/lib/bohra/modules/seqkit/fx2tab copying bohra/modules/seqkit/fx2tab/functions.nf -> build/lib/bohra/modules/seqkit/fx2tab copying bohra/modules/seqkit/fx2tab/main.nf -> build/lib/bohra/modules/seqkit/fx2tab copying bohra/modules/seqkit/fx2tab/meta.yml -> build/lib/bohra/modules/seqkit/fx2tab creating build/lib/bohra/modules/seqkit/stats copying bohra/modules/seqkit/stats/functions.nf -> build/lib/bohra/modules/seqkit/stats copying bohra/modules/seqkit/stats/main.nf -> build/lib/bohra/modules/seqkit/stats copying bohra/modules/seqkit/stats/meta.yml -> build/lib/bohra/modules/seqkit/stats creating build/lib/bohra/modules/seqtk copying bohra/modules/seqtk/functions.nf -> build/lib/bohra/modules/seqtk copying bohra/modules/seqtk/main.nf -> build/lib/bohra/modules/seqtk copying bohra/modules/seqtk/meta.yml -> build/lib/bohra/modules/seqtk creating build/lib/bohra/modules/shovill copying bohra/modules/shovill/functions.nf -> build/lib/bohra/modules/shovill copying bohra/modules/shovill/main.nf -> build/lib/bohra/modules/shovill copying bohra/modules/shovill/meta.yml -> build/lib/bohra/modules/shovill creating build/lib/bohra/modules/skesa copying bohra/modules/skesa/functions.nf -> build/lib/bohra/modules/skesa copying bohra/modules/skesa/main.nf -> build/lib/bohra/modules/skesa copying bohra/modules/skesa/meta.yml -> build/lib/bohra/modules/skesa creating build/lib/bohra/modules/snippy copying bohra/modules/snippy/functions.nf -> build/lib/bohra/modules/snippy copying bohra/modules/snippy/main.nf -> build/lib/bohra/modules/snippy copying bohra/modules/snippy/meta.yml -> build/lib/bohra/modules/snippy creating build/lib/bohra/modules/snippy_clean copying bohra/modules/snippy_clean/functions.nf -> build/lib/bohra/modules/snippy_clean copying bohra/modules/snippy_clean/main.nf -> build/lib/bohra/modules/snippy_clean copying bohra/modules/snippy_clean/meta.yml -> build/lib/bohra/modules/snippy_clean creating build/lib/bohra/modules/snippy_core copying bohra/modules/snippy_core/functions.nf -> build/lib/bohra/modules/snippy_core copying bohra/modules/snippy_core/main.nf -> build/lib/bohra/modules/snippy_core copying bohra/modules/snippy_core/meta.yml -> build/lib/bohra/modules/snippy_core creating build/lib/bohra/modules/snp_dists copying bohra/modules/snp_dists/functions.nf -> build/lib/bohra/modules/snp_dists copying bohra/modules/snp_dists/main.nf -> build/lib/bohra/modules/snp_dists copying bohra/modules/snp_dists/meta.yml -> build/lib/bohra/modules/snp_dists creating build/lib/bohra/modules/spades copying bohra/modules/spades/functions.nf -> build/lib/bohra/modules/spades copying bohra/modules/spades/main.nf -> build/lib/bohra/modules/spades copying bohra/modules/spades/meta.yml -> build/lib/bohra/modules/spades creating build/lib/bohra/templates copying bohra/templates/cluster.tmpl -> build/lib/bohra/templates copying bohra/templates/config_snippy.yaml -> build/lib/bohra/templates copying bohra/templates/index.html -> build/lib/bohra/templates copying bohra/templates/report_analysis.json -> build/lib/bohra/templates creating build/lib/bohra/tests copying bohra/tests/test.bed -> build/lib/bohra/tests copying bohra/tests/test.gbk -> build/lib/bohra/tests copying bohra/tests/test.tab -> build/lib/bohra/tests copying bohra/tests/test_bohra.py -> build/lib/bohra/tests copying bohra/tests/test_file.txt -> build/lib/bohra/tests creating build/lib/bohra/workflows copying bohra/workflows/assemble_typing.nf -> build/lib/bohra/workflows copying bohra/workflows/collation.nf -> build/lib/bohra/workflows copying bohra/workflows/common.nf -> build/lib/bohra/workflows copying bohra/workflows/default.nf -> build/lib/bohra/workflows copying bohra/workflows/pangenome.nf -> build/lib/bohra/workflows copying bohra/workflows/preview.nf -> build/lib/bohra/workflows + sleep 1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.wXi68m + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 ++ dirname /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 + cd bohra-2.2.1 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/generic-hardened-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/generic-hardened-ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 running install /usr/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running install_lib creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9 creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra copying build/lib/bohra/__init__.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra copying build/lib/bohra/version.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/assemble_typing.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/common.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/pangenome.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/default.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/collation.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/workflows/preview.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/workflows copying build/lib/bohra/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/tests/test.bed -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/tests/test_file.txt -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/tests/test.tab -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/tests/test_bohra.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/tests/test.gbk -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests copying build/lib/bohra/bohra.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra copying build/lib/bohra/nextflow.config -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mobsuite copying build/lib/bohra/modules/mobsuite/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mobsuite copying build/lib/bohra/modules/mobsuite/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mobsuite copying build/lib/bohra/modules/mobsuite/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mobsuite creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqtk copying build/lib/bohra/modules/seqtk/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqtk copying build/lib/bohra/modules/seqtk/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqtk copying build/lib/bohra/modules/seqtk/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqtk creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/fx2tab copying build/lib/bohra/modules/seqkit/fx2tab/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/fx2tab copying build/lib/bohra/modules/seqkit/fx2tab/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/fx2tab copying build/lib/bohra/modules/seqkit/fx2tab/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/fx2tab creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/stats copying build/lib/bohra/modules/seqkit/stats/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/stats copying build/lib/bohra/modules/seqkit/stats/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/stats copying build/lib/bohra/modules/seqkit/stats/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/seqkit/stats creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome copying build/lib/bohra/modules/resistome/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome copying build/lib/bohra/modules/resistome/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin copying build/lib/bohra/modules/resistome/bin/concat.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin copying build/lib/bohra/modules/resistome/bin/combine.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin copying build/lib/bohra/modules/resistome/bin/meta.yaml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin copying build/lib/bohra/modules/resistome/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy copying build/lib/bohra/modules/snippy/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy copying build/lib/bohra/modules/snippy/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy copying build/lib/bohra/modules/snippy/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/prokka copying build/lib/bohra/modules/prokka/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/prokka copying build/lib/bohra/modules/prokka/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/prokka copying build/lib/bohra/modules/prokka/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/prokka creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/sketch copying build/lib/bohra/modules/mash/sketch/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/sketch copying build/lib/bohra/modules/mash/sketch/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/sketch copying build/lib/bohra/modules/mash/sketch/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/sketch creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/triangle copying build/lib/bohra/modules/mash/triangle/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/triangle copying build/lib/bohra/modules/mash/triangle/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/triangle copying build/lib/bohra/modules/mash/triangle/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mash/triangle creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/quicktree copying build/lib/bohra/modules/quicktree/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/quicktree copying build/lib/bohra/modules/quicktree/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/quicktree copying build/lib/bohra/modules/quicktree/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/quicktree creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree copying build/lib/bohra/modules/iqtree/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree copying build/lib/bohra/modules/iqtree/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree/bin copying build/lib/bohra/modules/iqtree/bin/iqtree_generator.sh -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree/bin copying build/lib/bohra/modules/iqtree/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/iqtree creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg copying build/lib/bohra/modules/roary2svg/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg copying build/lib/bohra/modules/roary2svg/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg/bin copying build/lib/bohra/modules/roary2svg/bin/roary2svg.pl -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg/bin copying build/lib/bohra/modules/roary2svg/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/roary2svg creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mlst copying build/lib/bohra/modules/mlst/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mlst copying build/lib/bohra/modules/mlst/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mlst copying build/lib/bohra/modules/mlst/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/mlst creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/shovill copying build/lib/bohra/modules/shovill/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/shovill copying build/lib/bohra/modules/shovill/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/shovill copying build/lib/bohra/modules/shovill/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/shovill creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snp_dists copying build/lib/bohra/modules/snp_dists/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snp_dists copying build/lib/bohra/modules/snp_dists/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snp_dists copying build/lib/bohra/modules/snp_dists/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snp_dists creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/csvtk copying build/lib/bohra/modules/csvtk/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/csvtk copying build/lib/bohra/modules/csvtk/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/csvtk copying build/lib/bohra/modules/csvtk/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/csvtk creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/spades copying build/lib/bohra/modules/spades/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/spades copying build/lib/bohra/modules/spades/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/spades copying build/lib/bohra/modules/spades/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/spades creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_clean copying build/lib/bohra/modules/snippy_clean/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_clean copying build/lib/bohra/modules/snippy_clean/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_clean copying build/lib/bohra/modules/snippy_clean/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_clean creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/skesa copying build/lib/bohra/modules/skesa/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/skesa copying build/lib/bohra/modules/skesa/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/skesa copying build/lib/bohra/modules/skesa/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/skesa creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_core copying build/lib/bohra/modules/snippy_core/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_core copying build/lib/bohra/modules/snippy_core/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_core copying build/lib/bohra/modules/snippy_core/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/snippy_core creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/gubbins copying build/lib/bohra/modules/gubbins/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/gubbins copying build/lib/bohra/modules/gubbins/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/gubbins copying build/lib/bohra/modules/gubbins/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/gubbins creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/panaroo copying build/lib/bohra/modules/panaroo/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/panaroo copying build/lib/bohra/modules/panaroo/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/panaroo copying build/lib/bohra/modules/panaroo/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/panaroo creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation copying build/lib/bohra/modules/collation/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation copying build/lib/bohra/modules/collation/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/collate_kraken2.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/compile.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/add_header_mlst.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/snippy_qc.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/collate_plasmids.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/wrangle_mobsuite.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/collate_stats.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin copying build/lib/bohra/modules/collation/bin/collate_asm.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/kraken2 copying build/lib/bohra/modules/kraken2/main.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/kraken2 copying build/lib/bohra/modules/kraken2/functions.nf -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/kraken2 copying build/lib/bohra/modules/kraken2/meta.yml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/kraken2 creating /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/templates copying build/lib/bohra/templates/report_analysis.json -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/templates copying build/lib/bohra/templates/config_snippy.yaml -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/templates copying build/lib/bohra/templates/index.html -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/templates copying build/lib/bohra/templates/cluster.tmpl -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/templates copying build/lib/bohra/Utils.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra copying build/lib/bohra/CustomLog.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra copying build/lib/bohra/SnpDetection.py -> /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/__init__.py to __init__.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/version.py to version.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/tests/test_bohra.py to test_bohra.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/bohra.py to bohra.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin/concat.py to concat.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/resistome/bin/combine.py to combine.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/collate_kraken2.py to collate_kraken2.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/compile.py to compile.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/add_header_mlst.py to add_header_mlst.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/snippy_qc.py to snippy_qc.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/collate_plasmids.py to collate_plasmids.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/wrangle_mobsuite.py to wrangle_mobsuite.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/collate_stats.py to collate_stats.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/modules/collation/bin/collate_asm.py to collate_asm.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/Utils.py to Utils.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/CustomLog.py to CustomLog.cpython-39.pyc byte-compiling /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra/SnpDetection.py to SnpDetection.cpython-39.pyc writing byte-compilation script '/tmp/tmpgk5w67ls.py' /usr/bin/python3 /tmp/tmpgk5w67ls.py removing /tmp/tmpgk5w67ls.py running install_egg_info running egg_info writing bohra.egg-info/PKG-INFO writing dependency_links to bohra.egg-info/dependency_links.txt writing entry points to bohra.egg-info/entry_points.txt writing requirements to bohra.egg-info/requires.txt writing top-level names to bohra.egg-info/top_level.txt reading manifest file 'bohra.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'bohra/modules/*' adding license file 'LICENSE.txt' writing manifest file 'bohra.egg-info/SOURCES.txt' Copying bohra.egg-info to /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9/site-packages/bohra-2.2.1-py3.9.egg-info running install_scripts Installing bohra script to /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/bin + install -d -m755 /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64//usr/share/doc/python-bohra + '[' -d doc ']' ~/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 ~/build/BUILD/bohra-2.2.1 + '[' -d docs ']' + '[' -d example ']' + '[' -d examples ']' + pushd /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 + '[' -d usr/lib ']' + find usr/lib -type f -printf '/%h/%f\n' + '[' -d usr/lib64 ']' + '[' -d usr/bin ']' + find usr/bin -type f -printf '/%h/%f\n' + '[' -d usr/sbin ']' + touch doclist.lst + '[' -d usr/share/man ']' + popd ~/build/BUILD/bohra-2.2.1 + mv /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/filelist.lst . + mv /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/doclist.lst . + /usr/bin/find-debuginfo -j4 --strict-build-id -i --build-id-seed 2.2.1-1 --unique-debug-suffix -2.2.1-1.x86_64 --unique-debug-src-base python-bohra-2.2.1-1.x86_64 -S debugsourcefiles.list /builddir/build/BUILD/bohra-2.2.1 find: 'debug': No such file or directory + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1 Bytecompiling .py files below /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64/usr/lib/python3.9 using /usr/bin/python3.9 + /usr/lib/rpm/brp-python-hardlink Processing files: python3-bohra-2.2.1-1.noarch Provides: python-bohra python3-bohra = 2.2.1-1 python3.9dist(bohra) = 2.2.1 python3dist(bohra) = 2.2.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/bash /usr/bin/env /usr/bin/python3 python(abi) = 3.9 python3.9dist(altair) python3.9dist(biopython) >= 1.70 python3.9dist(jinja2) python3.9dist(numpy) = 1.23.1 python3.9dist(packaging) python3.9dist(pandas) = 1.0.5 python3.9dist(psutil) python3.9dist(pytest) python3.9dist(setuptools) python3.9dist(sh) Processing files: python-bohra-help-2.2.1-1.noarch warning: Empty %files file /builddir/build/BUILD/bohra-2.2.1/doclist.lst Provides: python-bohra-help = 2.2.1-1 python3-bohra-doc Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 Wrote: /builddir/build/RPMS/python-bohra-help-2.2.1-1.noarch.rpm Wrote: /builddir/build/RPMS/python3-bohra-2.2.1-1.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.jk9ZjX + umask 022 + cd /builddir/build/BUILD + cd bohra-2.2.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/python-bohra-2.2.1-1.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0