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author | CoprDistGit <infra@openeuler.org> | 2023-05-29 11:07:15 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-05-29 11:07:15 +0000 |
commit | 60a96ab77a732efdb7bdd6a80919b4edd88e9bc4 (patch) | |
tree | 78f22f8c66bfaf5b4ba5be2586eed81f53b32107 | |
parent | 8d2b264d20e103d8ffc64ad2db4f16ec14477ca6 (diff) |
automatic import of python-biosimulators-gillespy2
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-biosimulators-gillespy2.spec | 118 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 120 insertions, 0 deletions
@@ -0,0 +1 @@ +/biosimulators_gillespy2-0.1.37.tar.gz diff --git a/python-biosimulators-gillespy2.spec b/python-biosimulators-gillespy2.spec new file mode 100644 index 0000000..6b3bf8c --- /dev/null +++ b/python-biosimulators-gillespy2.spec @@ -0,0 +1,118 @@ +%global _empty_manifest_terminate_build 0 +Name: python-biosimulators-gillespy2 +Version: 0.1.37 +Release: 1 +Summary: BioSimulators-compliant command-line interface to the GillesPy2 simulation program. +License: MIT +URL: https://github.com/biosimulators/Biosimulators_GillesPy2 +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/37/de/076be7a210170c7c01ce5c245ae1c71db50f41992e69e16a06868d64a70f/biosimulators_gillespy2-0.1.37.tar.gz +BuildArch: noarch + +Requires: python3-biosimulators-utils[logging] +Requires: python3-gillespy2 +Requires: python3-kisao +Requires: python3-lxml +Requires: python3-numpy +Requires: python3-libsbml +Requires: python3-biosimulators-utils[containers] +Requires: python3-dateutil +Requires: python3-biosimulators-utils[containers] +Requires: python3-dateutil + +%description +BioSimulators-compliant command-line interface and Docker image for the +`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program. +This command-line interface and Docker image enable users to use +GillesPy2 to execute `COMBINE/OMEX +archives <https://combinearchive.org/>`__ that describe one or more +simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of +one or more models (in `SBML format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by GillesPy2 +is available at +`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__. +A simple web application and web service for using GillesPy2 to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%package -n python3-biosimulators-gillespy2 +Summary: BioSimulators-compliant command-line interface to the GillesPy2 simulation program. +Provides: python-biosimulators-gillespy2 +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-biosimulators-gillespy2 +BioSimulators-compliant command-line interface and Docker image for the +`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program. +This command-line interface and Docker image enable users to use +GillesPy2 to execute `COMBINE/OMEX +archives <https://combinearchive.org/>`__ that describe one or more +simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of +one or more models (in `SBML format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by GillesPy2 +is available at +`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__. +A simple web application and web service for using GillesPy2 to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%package help +Summary: Development documents and examples for biosimulators-gillespy2 +Provides: python3-biosimulators-gillespy2-doc +%description help +BioSimulators-compliant command-line interface and Docker image for the +`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program. +This command-line interface and Docker image enable users to use +GillesPy2 to execute `COMBINE/OMEX +archives <https://combinearchive.org/>`__ that describe one or more +simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of +one or more models (in `SBML format <http://sbml.org]>`__). +A list of the algorithms and algorithm parameters supported by GillesPy2 +is available at +`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__. +A simple web application and web service for using GillesPy2 to execute +COMBINE/OMEX archives is also available at +`runBioSimulations <https://run.biosimulations.org>`__. + +%prep +%autosetup -n biosimulators-gillespy2-0.1.37 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-biosimulators-gillespy2 -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Mon May 29 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.37-1 +- Package Spec generated @@ -0,0 +1 @@ +2fdd25ff0dfcfe4847de74d092b8c7e1 biosimulators_gillespy2-0.1.37.tar.gz |