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authorCoprDistGit <infra@openeuler.org>2023-05-29 11:07:15 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-29 11:07:15 +0000
commit60a96ab77a732efdb7bdd6a80919b4edd88e9bc4 (patch)
tree78f22f8c66bfaf5b4ba5be2586eed81f53b32107
parent8d2b264d20e103d8ffc64ad2db4f16ec14477ca6 (diff)
automatic import of python-biosimulators-gillespy2
-rw-r--r--.gitignore1
-rw-r--r--python-biosimulators-gillespy2.spec118
-rw-r--r--sources1
3 files changed, 120 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..4f5e65d 100644
--- a/.gitignore
+++ b/.gitignore
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+/biosimulators_gillespy2-0.1.37.tar.gz
diff --git a/python-biosimulators-gillespy2.spec b/python-biosimulators-gillespy2.spec
new file mode 100644
index 0000000..6b3bf8c
--- /dev/null
+++ b/python-biosimulators-gillespy2.spec
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+%global _empty_manifest_terminate_build 0
+Name: python-biosimulators-gillespy2
+Version: 0.1.37
+Release: 1
+Summary: BioSimulators-compliant command-line interface to the GillesPy2 simulation program.
+License: MIT
+URL: https://github.com/biosimulators/Biosimulators_GillesPy2
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/37/de/076be7a210170c7c01ce5c245ae1c71db50f41992e69e16a06868d64a70f/biosimulators_gillespy2-0.1.37.tar.gz
+BuildArch: noarch
+
+Requires: python3-biosimulators-utils[logging]
+Requires: python3-gillespy2
+Requires: python3-kisao
+Requires: python3-lxml
+Requires: python3-numpy
+Requires: python3-libsbml
+Requires: python3-biosimulators-utils[containers]
+Requires: python3-dateutil
+Requires: python3-biosimulators-utils[containers]
+Requires: python3-dateutil
+
+%description
+BioSimulators-compliant command-line interface and Docker image for the
+`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program.
+This command-line interface and Docker image enable users to use
+GillesPy2 to execute `COMBINE/OMEX
+archives <https://combinearchive.org/>`__ that describe one or more
+simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of
+one or more models (in `SBML format <http://sbml.org]>`__).
+A list of the algorithms and algorithm parameters supported by GillesPy2
+is available at
+`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__.
+A simple web application and web service for using GillesPy2 to execute
+COMBINE/OMEX archives is also available at
+`runBioSimulations <https://run.biosimulations.org>`__.
+
+%package -n python3-biosimulators-gillespy2
+Summary: BioSimulators-compliant command-line interface to the GillesPy2 simulation program.
+Provides: python-biosimulators-gillespy2
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-biosimulators-gillespy2
+BioSimulators-compliant command-line interface and Docker image for the
+`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program.
+This command-line interface and Docker image enable users to use
+GillesPy2 to execute `COMBINE/OMEX
+archives <https://combinearchive.org/>`__ that describe one or more
+simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of
+one or more models (in `SBML format <http://sbml.org]>`__).
+A list of the algorithms and algorithm parameters supported by GillesPy2
+is available at
+`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__.
+A simple web application and web service for using GillesPy2 to execute
+COMBINE/OMEX archives is also available at
+`runBioSimulations <https://run.biosimulations.org>`__.
+
+%package help
+Summary: Development documents and examples for biosimulators-gillespy2
+Provides: python3-biosimulators-gillespy2-doc
+%description help
+BioSimulators-compliant command-line interface and Docker image for the
+`GillesPy2 <https://stochss.github.io/GillesPy2>`__ simulation program.
+This command-line interface and Docker image enable users to use
+GillesPy2 to execute `COMBINE/OMEX
+archives <https://combinearchive.org/>`__ that describe one or more
+simulation experiments (in `SED-ML format <https://sed-ml.org>`__) of
+one or more models (in `SBML format <http://sbml.org]>`__).
+A list of the algorithms and algorithm parameters supported by GillesPy2
+is available at
+`BioSimulators <https://biosimulators.org/simulators/gillespy2>`__.
+A simple web application and web service for using GillesPy2 to execute
+COMBINE/OMEX archives is also available at
+`runBioSimulations <https://run.biosimulations.org>`__.
+
+%prep
+%autosetup -n biosimulators-gillespy2-0.1.37
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-biosimulators-gillespy2 -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Mon May 29 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.37-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..e3f3c24
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+2fdd25ff0dfcfe4847de74d092b8c7e1 biosimulators_gillespy2-0.1.37.tar.gz