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authorCoprDistGit <infra@openeuler.org>2023-05-05 09:05:41 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-05 09:05:41 +0000
commitb7786a86ce78698fcfef35631a688c54cf440e3c (patch)
tree509541835d68853575b7179a8f066c8f4c38d004
parent69e0db90352ebd81e1289def07d605c4bb7f7324 (diff)
automatic import of python-h1dopeneuler20.03
-rw-r--r--.gitignore1
-rw-r--r--python-h1d.spec169
-rw-r--r--sources1
3 files changed, 171 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..a9d37da 100644
--- a/.gitignore
+++ b/.gitignore
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+/h1d-0.2.4.tar.gz
diff --git a/python-h1d.spec b/python-h1d.spec
new file mode 100644
index 0000000..8fdf712
--- /dev/null
+++ b/python-h1d.spec
@@ -0,0 +1,169 @@
+%global _empty_manifest_terminate_build 0
+Name: python-h1d
+Version: 0.2.4
+Release: 1
+Summary: HiC1Dmetrics pip version
+License: GNU General Public License v3 (GPLv3)
+URL: https://github.com/wangjk321/HiC1Dmetrics
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/8c/89/10883d6b5672efb3f4b15af5c687c8159a78c13a1103803c98b9a27b3c1b/h1d-0.2.4.tar.gz
+BuildArch: noarch
+
+Requires: python3-pandas
+Requires: python3-numpy
+Requires: python3-scikit-learn
+Requires: python3-scipy
+Requires: python3-matplotlib
+Requires: python3-seaborn
+Requires: python3-multiprocess
+Requires: python3-fithic
+Requires: python3-statsmodels
+Requires: python3-cooler
+
+%description
+# HiC1Dmetrics
+This repository contain code and basic tutorial for "HiC1Dmetrics"
+
+![figure1](https://github.com/wangjk321/HiC1Dmetrics/blob/master/IMG/Figure1.png)
+
+# Installation
+
+HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by
+
+```python
+pip install h1d
+```
+After installation, try:
+```
+$ h1d -V
+h1d version 0.1.0
+```
+
+# Documents
+
+For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/)
+
+# Web application
+
+Please click [hic1d webapp](http://hic1d.herokuapp.com)
+
+# Citation
+
+Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021.
+
+
+%package -n python3-h1d
+Summary: HiC1Dmetrics pip version
+Provides: python-h1d
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-h1d
+# HiC1Dmetrics
+This repository contain code and basic tutorial for "HiC1Dmetrics"
+
+![figure1](https://github.com/wangjk321/HiC1Dmetrics/blob/master/IMG/Figure1.png)
+
+# Installation
+
+HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by
+
+```python
+pip install h1d
+```
+After installation, try:
+```
+$ h1d -V
+h1d version 0.1.0
+```
+
+# Documents
+
+For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/)
+
+# Web application
+
+Please click [hic1d webapp](http://hic1d.herokuapp.com)
+
+# Citation
+
+Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021.
+
+
+%package help
+Summary: Development documents and examples for h1d
+Provides: python3-h1d-doc
+%description help
+# HiC1Dmetrics
+This repository contain code and basic tutorial for "HiC1Dmetrics"
+
+![figure1](https://github.com/wangjk321/HiC1Dmetrics/blob/master/IMG/Figure1.png)
+
+# Installation
+
+HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by
+
+```python
+pip install h1d
+```
+After installation, try:
+```
+$ h1d -V
+h1d version 0.1.0
+```
+
+# Documents
+
+For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/)
+
+# Web application
+
+Please click [hic1d webapp](http://hic1d.herokuapp.com)
+
+# Citation
+
+Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021.
+
+
+%prep
+%autosetup -n h1d-0.2.4
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-h1d -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.2.4-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..41bd928
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+1396af56e5273820b02af31efc16fc32 h1d-0.2.4.tar.gz