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author | CoprDistGit <infra@openeuler.org> | 2023-05-05 09:05:41 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-05-05 09:05:41 +0000 |
commit | b7786a86ce78698fcfef35631a688c54cf440e3c (patch) | |
tree | 509541835d68853575b7179a8f066c8f4c38d004 | |
parent | 69e0db90352ebd81e1289def07d605c4bb7f7324 (diff) |
automatic import of python-h1dopeneuler20.03
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-h1d.spec | 169 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 171 insertions, 0 deletions
@@ -0,0 +1 @@ +/h1d-0.2.4.tar.gz diff --git a/python-h1d.spec b/python-h1d.spec new file mode 100644 index 0000000..8fdf712 --- /dev/null +++ b/python-h1d.spec @@ -0,0 +1,169 @@ +%global _empty_manifest_terminate_build 0 +Name: python-h1d +Version: 0.2.4 +Release: 1 +Summary: HiC1Dmetrics pip version +License: GNU General Public License v3 (GPLv3) +URL: https://github.com/wangjk321/HiC1Dmetrics +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/8c/89/10883d6b5672efb3f4b15af5c687c8159a78c13a1103803c98b9a27b3c1b/h1d-0.2.4.tar.gz +BuildArch: noarch + +Requires: python3-pandas +Requires: python3-numpy +Requires: python3-scikit-learn +Requires: python3-scipy +Requires: python3-matplotlib +Requires: python3-seaborn +Requires: python3-multiprocess +Requires: python3-fithic +Requires: python3-statsmodels +Requires: python3-cooler + +%description +# HiC1Dmetrics +This repository contain code and basic tutorial for "HiC1Dmetrics" + + + +# Installation + +HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by + +```python +pip install h1d +``` +After installation, try: +``` +$ h1d -V +h1d version 0.1.0 +``` + +# Documents + +For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/) + +# Web application + +Please click [hic1d webapp](http://hic1d.herokuapp.com) + +# Citation + +Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021. + + +%package -n python3-h1d +Summary: HiC1Dmetrics pip version +Provides: python-h1d +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-h1d +# HiC1Dmetrics +This repository contain code and basic tutorial for "HiC1Dmetrics" + + + +# Installation + +HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by + +```python +pip install h1d +``` +After installation, try: +``` +$ h1d -V +h1d version 0.1.0 +``` + +# Documents + +For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/) + +# Web application + +Please click [hic1d webapp](http://hic1d.herokuapp.com) + +# Citation + +Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021. + + +%package help +Summary: Development documents and examples for h1d +Provides: python3-h1d-doc +%description help +# HiC1Dmetrics +This repository contain code and basic tutorial for "HiC1Dmetrics" + + + +# Installation + +HiC1Dmetrics was based on `python3` and released on [PyPI](https://pypi.org/project/h1d/), it could be installed by + +```python +pip install h1d +``` +After installation, try: +``` +$ h1d -V +h1d version 0.1.0 +``` + +# Documents + +For detailed usage, please refer to [h1d Documents](https://h1d.readthedocs.io/en/latest/) + +# Web application + +Please click [hic1d webapp](http://hic1d.herokuapp.com) + +# Citation + +Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. *Briefings in Bioinformatics*, bbab509,2021. + + +%prep +%autosetup -n h1d-0.2.4 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-h1d -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.2.4-1 +- Package Spec generated @@ -0,0 +1 @@ +1396af56e5273820b02af31efc16fc32 h1d-0.2.4.tar.gz |