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authorCoprDistGit <infra@openeuler.org>2023-05-15 06:19:23 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-15 06:19:23 +0000
commit1c3f4e0ee30bd2fe19f30f1ce3dfc8f646571685 (patch)
treea564e990ede0e83d7629165dff014a17c542bf28
parent3d1db2bee55e5553a406ba9db47199d9df50e975 (diff)
automatic import of python-nmdc-schema
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-rw-r--r--python-nmdc-schema.spec200
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diff --git a/.gitignore b/.gitignore
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+/nmdc_schema-7.5.0.tar.gz
diff --git a/python-nmdc-schema.spec b/python-nmdc-schema.spec
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+%global _empty_manifest_terminate_build 0
+Name: python-nmdc-schema
+Version: 7.5.0
+Release: 1
+Summary: Schema resources for the National Microbiome Data Collaborative (NMDC)
+License: MIT
+URL: https://microbiomedata.github.io/nmdc-schema/
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/e4/d6/ba4e49d15bd09d591e6b1369e148d694afe9b9f98c54a74b1bce446d4a39/nmdc_schema-7.5.0.tar.gz
+BuildArch: noarch
+
+Requires: python3-linkml
+Requires: python3-linkml-runtime
+
+%description
+<p align="center">
+ <img src="images/nmdc_logo_long.jpeg" width="100" height="40"/>
+</p>
+
+# National Microbiome Data Collaborative Schema
+
+[![PyPI - License](https://img.shields.io/pypi/l/nmdc-schema)](https://github.com/microbiomedata/nmdc-schema/blob/main/LICENSE)
+[![PyPI version](https://badge.fury.io/py/nmdc-schema.svg)](https://badge.fury.io/py/nmdc-schema)
+
+The NMDC is a multi-organizational effort to integrate microbiome data across diverse areas in medicine, agriculture,
+bioenergy, and the environment. This integrated platform facilitates comprehensive discovery of and access to
+multidisciplinary microbiome data in order to unlock new possibilities with microbiome data science.
+
+This repository mainly defines a [LinkML](https://github.com/linkml/linkml) schema for managing metadata from
+the [National Microbiome Data Collaborative (NMDC)](https://microbiomedata.org/).
+
+## Repository Contents Overview
+
+Some products that are maintained, and tasks orchestrated within this repository are:
+
+- Maintenance of LinkML YAML that specifies the NMDC Schema
+ - [src/schema/nmdc.yaml](src/schema/nmdc.yaml)
+ - and various other YAML schemas imported by it,
+ like [prov.yaml](src/schema/prov.yaml), [annotation.yaml](src/schema/annotation.yaml), etc. all which you can find
+ in the [src/schema](src/schema/) folder
+- Makefile targets for converting the schema from it's native LinkML YAML format to other artifact
+ like [JSON Schema](project/jsonschema/nmdc.schema.json)
+- Build, deployment and distribution of the schema as a PyPI package
+- Automatic publishing of refreshed documentation upon change to the schema,
+ accessible [here](https://microbiomedata.github.io/nmdc-schema/)
+
+## Background
+
+The NMDC [Introduction to metadata and ontologies](https://microbiomedata.org/introduction-to-metadata-and-ontologies/)
+primer provides some the context for this project.
+
+## Maintaining the Schema
+
+**New system requirement: [Mike Farah's GO-based yq](https://github.com/mikefarah/yq)**
+
+See [MAINTAINERS.md](MAINTAINERS.md) for instructions on maintaining and updating the schema.
+
+
+
+%package -n python3-nmdc-schema
+Summary: Schema resources for the National Microbiome Data Collaborative (NMDC)
+Provides: python-nmdc-schema
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-nmdc-schema
+<p align="center">
+ <img src="images/nmdc_logo_long.jpeg" width="100" height="40"/>
+</p>
+
+# National Microbiome Data Collaborative Schema
+
+[![PyPI - License](https://img.shields.io/pypi/l/nmdc-schema)](https://github.com/microbiomedata/nmdc-schema/blob/main/LICENSE)
+[![PyPI version](https://badge.fury.io/py/nmdc-schema.svg)](https://badge.fury.io/py/nmdc-schema)
+
+The NMDC is a multi-organizational effort to integrate microbiome data across diverse areas in medicine, agriculture,
+bioenergy, and the environment. This integrated platform facilitates comprehensive discovery of and access to
+multidisciplinary microbiome data in order to unlock new possibilities with microbiome data science.
+
+This repository mainly defines a [LinkML](https://github.com/linkml/linkml) schema for managing metadata from
+the [National Microbiome Data Collaborative (NMDC)](https://microbiomedata.org/).
+
+## Repository Contents Overview
+
+Some products that are maintained, and tasks orchestrated within this repository are:
+
+- Maintenance of LinkML YAML that specifies the NMDC Schema
+ - [src/schema/nmdc.yaml](src/schema/nmdc.yaml)
+ - and various other YAML schemas imported by it,
+ like [prov.yaml](src/schema/prov.yaml), [annotation.yaml](src/schema/annotation.yaml), etc. all which you can find
+ in the [src/schema](src/schema/) folder
+- Makefile targets for converting the schema from it's native LinkML YAML format to other artifact
+ like [JSON Schema](project/jsonschema/nmdc.schema.json)
+- Build, deployment and distribution of the schema as a PyPI package
+- Automatic publishing of refreshed documentation upon change to the schema,
+ accessible [here](https://microbiomedata.github.io/nmdc-schema/)
+
+## Background
+
+The NMDC [Introduction to metadata and ontologies](https://microbiomedata.org/introduction-to-metadata-and-ontologies/)
+primer provides some the context for this project.
+
+## Maintaining the Schema
+
+**New system requirement: [Mike Farah's GO-based yq](https://github.com/mikefarah/yq)**
+
+See [MAINTAINERS.md](MAINTAINERS.md) for instructions on maintaining and updating the schema.
+
+
+
+%package help
+Summary: Development documents and examples for nmdc-schema
+Provides: python3-nmdc-schema-doc
+%description help
+<p align="center">
+ <img src="images/nmdc_logo_long.jpeg" width="100" height="40"/>
+</p>
+
+# National Microbiome Data Collaborative Schema
+
+[![PyPI - License](https://img.shields.io/pypi/l/nmdc-schema)](https://github.com/microbiomedata/nmdc-schema/blob/main/LICENSE)
+[![PyPI version](https://badge.fury.io/py/nmdc-schema.svg)](https://badge.fury.io/py/nmdc-schema)
+
+The NMDC is a multi-organizational effort to integrate microbiome data across diverse areas in medicine, agriculture,
+bioenergy, and the environment. This integrated platform facilitates comprehensive discovery of and access to
+multidisciplinary microbiome data in order to unlock new possibilities with microbiome data science.
+
+This repository mainly defines a [LinkML](https://github.com/linkml/linkml) schema for managing metadata from
+the [National Microbiome Data Collaborative (NMDC)](https://microbiomedata.org/).
+
+## Repository Contents Overview
+
+Some products that are maintained, and tasks orchestrated within this repository are:
+
+- Maintenance of LinkML YAML that specifies the NMDC Schema
+ - [src/schema/nmdc.yaml](src/schema/nmdc.yaml)
+ - and various other YAML schemas imported by it,
+ like [prov.yaml](src/schema/prov.yaml), [annotation.yaml](src/schema/annotation.yaml), etc. all which you can find
+ in the [src/schema](src/schema/) folder
+- Makefile targets for converting the schema from it's native LinkML YAML format to other artifact
+ like [JSON Schema](project/jsonschema/nmdc.schema.json)
+- Build, deployment and distribution of the schema as a PyPI package
+- Automatic publishing of refreshed documentation upon change to the schema,
+ accessible [here](https://microbiomedata.github.io/nmdc-schema/)
+
+## Background
+
+The NMDC [Introduction to metadata and ontologies](https://microbiomedata.org/introduction-to-metadata-and-ontologies/)
+primer provides some the context for this project.
+
+## Maintaining the Schema
+
+**New system requirement: [Mike Farah's GO-based yq](https://github.com/mikefarah/yq)**
+
+See [MAINTAINERS.md](MAINTAINERS.md) for instructions on maintaining and updating the schema.
+
+
+
+%prep
+%autosetup -n nmdc-schema-7.5.0
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-nmdc-schema -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Mon May 15 2023 Python_Bot <Python_Bot@openeuler.org> - 7.5.0-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..975e2f6
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+076a9bab63e082baf5620b2cb13b6bce nmdc_schema-7.5.0.tar.gz