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%global _empty_manifest_terminate_build 0
Name: python-ATACFragQC
Version: 0.4.6
Release: 1
Summary: Fragment Quality Control for ATAC-seq
License: MIT
URL: https://github.com/0CBH0/ATACFragQC
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/83/b4/d670c2a7fdd5d9e594ddea6f0646bca46cddfda7a09624befef8ea4a3c35/ATACFragQC-0.4.6.tar.gz
BuildArch: noarch
%description
# ATACFragQC
The Python toolkits designed to control the fragment quality of Bulk/SingCell ATAC-seq.
## Installation
~~~
python3 -m pip install --upgrade ATACFragQC
~~~
## Usage
~~~
# Basic usage
ATACFragQC [options] -i <input.bam> -r <reference.gtf>
# For more information
ATACFragQC -h
~~~
## Features
* The distrubution of fragments in chromosomes
* The distrubution of fragment lengths
* The distrubution of fragments around transcription start sites (TSSs)
* Other feature would be supported in the future ...
## Overview
%package -n python3-ATACFragQC
Summary: Fragment Quality Control for ATAC-seq
Provides: python-ATACFragQC
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-ATACFragQC
# ATACFragQC
The Python toolkits designed to control the fragment quality of Bulk/SingCell ATAC-seq.
## Installation
~~~
python3 -m pip install --upgrade ATACFragQC
~~~
## Usage
~~~
# Basic usage
ATACFragQC [options] -i <input.bam> -r <reference.gtf>
# For more information
ATACFragQC -h
~~~
## Features
* The distrubution of fragments in chromosomes
* The distrubution of fragment lengths
* The distrubution of fragments around transcription start sites (TSSs)
* Other feature would be supported in the future ...
## Overview
%package help
Summary: Development documents and examples for ATACFragQC
Provides: python3-ATACFragQC-doc
%description help
# ATACFragQC
The Python toolkits designed to control the fragment quality of Bulk/SingCell ATAC-seq.
## Installation
~~~
python3 -m pip install --upgrade ATACFragQC
~~~
## Usage
~~~
# Basic usage
ATACFragQC [options] -i <input.bam> -r <reference.gtf>
# For more information
ATACFragQC -h
~~~
## Features
* The distrubution of fragments in chromosomes
* The distrubution of fragment lengths
* The distrubution of fragments around transcription start sites (TSSs)
* Other feature would be supported in the future ...
## Overview
%prep
%autosetup -n ATACFragQC-0.4.6
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-ATACFragQC -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue May 30 2023 Python_Bot <Python_Bot@openeuler.org> - 0.4.6-1
- Package Spec generated
|
