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| author | CoprDistGit <infra@openeuler.org> | 2023-06-20 05:01:52 +0000 |
|---|---|---|
| committer | CoprDistGit <infra@openeuler.org> | 2023-06-20 05:01:52 +0000 |
| commit | 3624e6c7e92feb14c767efbdc79ef74093c05a43 (patch) | |
| tree | b3e57ca830dbc5cc7de24983252464bcdfffb950 /python-bam-readgroup-to-json.spec | |
| parent | 7bed4c837ad8af970e51ace6809017f35a06aa23 (diff) | |
automatic import of python-bam-readgroup-to-jsonopeneuler20.03
Diffstat (limited to 'python-bam-readgroup-to-json.spec')
| -rw-r--r-- | python-bam-readgroup-to-json.spec | 75 |
1 files changed, 75 insertions, 0 deletions
diff --git a/python-bam-readgroup-to-json.spec b/python-bam-readgroup-to-json.spec new file mode 100644 index 0000000..4025df5 --- /dev/null +++ b/python-bam-readgroup-to-json.spec @@ -0,0 +1,75 @@ +%global _empty_manifest_terminate_build 0 +Name: python-bam-readgroup-to-json +Version: 0.26 +Release: 1 +Summary: convert each readgroup id to a json file from a BAM +License: Apache 2.0 +URL: https://github.com/jeremiahsavage/bam_readgroup_to_json/ +Source0: https://mirrors.aliyun.com/pypi/web/packages/e5/d0/ed0f194478b6070c951cf2583531b9bd8870c2eb6768c45e5f491a460c34/bam_readgroup_to_json-0.26.tar.gz +BuildArch: noarch + +Requires: python3-pandas +Requires: python3-pysam +Requires: python3-sqlalchemy + +%description + + +%package -n python3-bam-readgroup-to-json +Summary: convert each readgroup id to a json file from a BAM +Provides: python-bam-readgroup-to-json +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-bam-readgroup-to-json + + +%package help +Summary: Development documents and examples for bam-readgroup-to-json +Provides: python3-bam-readgroup-to-json-doc +%description help + + +%prep +%autosetup -n bam_readgroup_to_json-0.26 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-bam-readgroup-to-json -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 0.26-1 +- Package Spec generated |