blob: 97010fd0c1aea55013e492f07f7667783d06fb97 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
|
%global _empty_manifest_terminate_build 0
Name: python-bio2bel
Version: 0.4.2
Release: 1
Summary: A framework for converting biological data sources to BEL
License: MIT
URL: https://github.com/bio2bel/bio2bel
Source0: https://mirrors.aliyun.com/pypi/web/packages/34/a1/d53cd8eaad3080920ecc5197ac8a0947086f8a59d9400808e3d0ce38084a/bio2bel-0.4.2.tar.gz
BuildArch: noarch
Requires: python3-sqlalchemy
Requires: python3-click
Requires: python3-numpy
Requires: python3-pandas
Requires: python3-tqdm
Requires: python3-easy-config
Requires: python3-pybel
Requires: python3-bel-resources
Requires: python3-pyobo
Requires: python3-pystow
Requires: python3-sphinx
Requires: python3-sphinx-rtd-theme
Requires: python3-sphinx-click
Requires: python3-sphinx-autodoc-typehints
Requires: python3-flask
Requires: python3-flask-admin
Requires: python3-flask-bootstrap
%description
Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
of schemata into the unified framework of the
`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
Two important places to look:
- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
%package -n python3-bio2bel
Summary: A framework for converting biological data sources to BEL
Provides: python-bio2bel
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-bio2bel
Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
of schemata into the unified framework of the
`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
Two important places to look:
- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
%package help
Summary: Development documents and examples for bio2bel
Provides: python3-bio2bel-doc
%description help
Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety
of schemata into the unified framework of the
`Biological Expression Language <https://biological-expression-language.github.io/>`_ [1]_.
Two important places to look:
- `How to make a Bio2BEL Repository <http://bio2bel.readthedocs.io/en/latest/tutorial.html>`_
- `How to use the CLI <http://bio2bel.readthedocs.io/en/latest/cli.html>`_
%prep
%autosetup -n bio2bel-0.4.2
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-bio2bel -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Thu Jun 08 2023 Python_Bot <Python_Bot@openeuler.org> - 0.4.2-1
- Package Spec generated
|