automatic import of python-biobb-pmxopeneuler20.03

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+/biobb_pmx-3.8.1.tar.gz
diff --git a/python-biobb-pmx.spec b/python-biobb-pmx.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-biobb-pmx
+Version:	3.8.1
+Release:	1
+Summary:	Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
+License:	Apache Software License
+URL:		https://github.com/bioexcel/biobb_pmx
+Source0:	https://mirrors.aliyun.com/pypi/web/packages/4c/bf/0cd5c2f2adf3995be6e0df092e2db4a06fae039756be1c076d734d249409/biobb_pmx-3.8.1.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-biobb-common
+
+%description
+[![](https://readthedocs.org/projects/biobb-pmx/badge/?version=latest)](https://biobb-pmx.readthedocs.io/en/latest/?badge=latest)
+[![](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](https://anaconda.org/bioconda/biobb_pmx)
+[![](https://img.shields.io/badge/docker-Quay.io-blue)](https://quay.io/repository/biocontainers/biobb_pmx)
+[![](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
+
+# biobb_pmx
+
+### Introduction
+Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
+Biobb (BioExcel building blocks) packages are Python building blocks that
+create new layer of compatibility and interoperability over popular
+bioinformatics tools.
+The latest documentation of this package can be found in our readthedocs site:
+[latest API documentation](http://biobb_pmx.readthedocs.io/en/latest/).
+
+### Version
+v3.8.1 2022.3
+
+### Installation
+Using PIP:
+
+> **Important:** PIP only installs the package. All the dependencies must be installed separately. To perform a complete installation, please use ANACONDA or DOCKER.
+
+* Installation:
+
+        pip install "biobb_pmx>=3.8.1"
+
+
+* Usage: [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html)
+
+Using ANACONDA:
+
+* Installation:
+
+
+        conda install -c bioconda "biobb_pmx>=3.8.1"
+
+
+* Usage: With conda installation BioBBs can be used with the [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html) and the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html)
+
+Using DOCKER:
+
+* Installation:
+
+
+        docker pull quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0
+
+
+* Usage:
+
+
+        docker run quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0 <command>
+
+
+[//]: # (Using SINGULARITY:)
+
+[//]: # (**MacOS users**: it's strongly recommended to avoid Singularity and use **Docker** as containerization system.)
+
+[//]: # (* Installation:)
+
+
+[//]: # (singularity pull --name biobb_pmx.sif shub://bioexcel/biobb_pmx)
+
+
+[//]: # (* Usage:)
+
+[//]: # (singularity exec biobb_pmx.sif <command>)
+
+
+The command list and specification can be found at the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html).
+
+
+### Copyright & Licensing
+This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).
+
+* (c) 2015-2021 [Barcelona Supercomputing Center](https://www.bsc.es/)
+* (c) 2015-2021 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/)
+
+Licensed under the
+[Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.
+
+![](https://bioexcel.eu/wp-content/uploads/2019/04/Bioexcell_logo_1080px_transp.png "Bioexcel")
+
+
+
+
+%package -n python3-biobb-pmx
+Summary:	Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
+Provides:	python-biobb-pmx
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-biobb-pmx
+[![](https://readthedocs.org/projects/biobb-pmx/badge/?version=latest)](https://biobb-pmx.readthedocs.io/en/latest/?badge=latest)
+[![](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](https://anaconda.org/bioconda/biobb_pmx)
+[![](https://img.shields.io/badge/docker-Quay.io-blue)](https://quay.io/repository/biocontainers/biobb_pmx)
+[![](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
+
+# biobb_pmx
+
+### Introduction
+Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
+Biobb (BioExcel building blocks) packages are Python building blocks that
+create new layer of compatibility and interoperability over popular
+bioinformatics tools.
+The latest documentation of this package can be found in our readthedocs site:
+[latest API documentation](http://biobb_pmx.readthedocs.io/en/latest/).
+
+### Version
+v3.8.1 2022.3
+
+### Installation
+Using PIP:
+
+> **Important:** PIP only installs the package. All the dependencies must be installed separately. To perform a complete installation, please use ANACONDA or DOCKER.
+
+* Installation:
+
+        pip install "biobb_pmx>=3.8.1"
+
+
+* Usage: [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html)
+
+Using ANACONDA:
+
+* Installation:
+
+
+        conda install -c bioconda "biobb_pmx>=3.8.1"
+
+
+* Usage: With conda installation BioBBs can be used with the [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html) and the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html)
+
+Using DOCKER:
+
+* Installation:
+
+
+        docker pull quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0
+
+
+* Usage:
+
+
+        docker run quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0 <command>
+
+
+[//]: # (Using SINGULARITY:)
+
+[//]: # (**MacOS users**: it's strongly recommended to avoid Singularity and use **Docker** as containerization system.)
+
+[//]: # (* Installation:)
+
+
+[//]: # (singularity pull --name biobb_pmx.sif shub://bioexcel/biobb_pmx)
+
+
+[//]: # (* Usage:)
+
+[//]: # (singularity exec biobb_pmx.sif <command>)
+
+
+The command list and specification can be found at the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html).
+
+
+### Copyright & Licensing
+This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).
+
+* (c) 2015-2021 [Barcelona Supercomputing Center](https://www.bsc.es/)
+* (c) 2015-2021 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/)
+
+Licensed under the
+[Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.
+
+![](https://bioexcel.eu/wp-content/uploads/2019/04/Bioexcell_logo_1080px_transp.png "Bioexcel")
+
+
+
+
+%package help
+Summary:	Development documents and examples for biobb-pmx
+Provides:	python3-biobb-pmx-doc
+%description help
+[![](https://readthedocs.org/projects/biobb-pmx/badge/?version=latest)](https://biobb-pmx.readthedocs.io/en/latest/?badge=latest)
+[![](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](https://anaconda.org/bioconda/biobb_pmx)
+[![](https://img.shields.io/badge/docker-Quay.io-blue)](https://quay.io/repository/biocontainers/biobb_pmx)
+[![](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
+
+# biobb_pmx
+
+### Introduction
+Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
+Biobb (BioExcel building blocks) packages are Python building blocks that
+create new layer of compatibility and interoperability over popular
+bioinformatics tools.
+The latest documentation of this package can be found in our readthedocs site:
+[latest API documentation](http://biobb_pmx.readthedocs.io/en/latest/).
+
+### Version
+v3.8.1 2022.3
+
+### Installation
+Using PIP:
+
+> **Important:** PIP only installs the package. All the dependencies must be installed separately. To perform a complete installation, please use ANACONDA or DOCKER.
+
+* Installation:
+
+        pip install "biobb_pmx>=3.8.1"
+
+
+* Usage: [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html)
+
+Using ANACONDA:
+
+* Installation:
+
+
+        conda install -c bioconda "biobb_pmx>=3.8.1"
+
+
+* Usage: With conda installation BioBBs can be used with the [Python API documentation](https://biobb-pmx.readthedocs.io/en/latest/modules.html) and the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html)
+
+Using DOCKER:
+
+* Installation:
+
+
+        docker pull quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0
+
+
+* Usage:
+
+
+        docker run quay.io/biocontainers/biobb_pmx:3.8.1--pyhdfd78af_0 <command>
+
+
+[//]: # (Using SINGULARITY:)
+
+[//]: # (**MacOS users**: it's strongly recommended to avoid Singularity and use **Docker** as containerization system.)
+
+[//]: # (* Installation:)
+
+
+[//]: # (singularity pull --name biobb_pmx.sif shub://bioexcel/biobb_pmx)
+
+
+[//]: # (* Usage:)
+
+[//]: # (singularity exec biobb_pmx.sif <command>)
+
+
+The command list and specification can be found at the [Command Line documentation](https://biobb-pmx.readthedocs.io/en/latest/command_line.html).
+
+
+### Copyright & Licensing
+This software has been developed in the [MMB group](http://mmb.irbbarcelona.org) at the [BSC](http://www.bsc.es/) & [IRB](https://www.irbbarcelona.org/) for the [European BioExcel](http://bioexcel.eu/), funded by the European Commission (EU H2020 [823830](http://cordis.europa.eu/projects/823830), EU H2020 [675728](http://cordis.europa.eu/projects/675728)).
+
+* (c) 2015-2021 [Barcelona Supercomputing Center](https://www.bsc.es/)
+* (c) 2015-2021 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/)
+
+Licensed under the
+[Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file LICENSE for details.
+
+![](https://bioexcel.eu/wp-content/uploads/2019/04/Bioexcell_logo_1080px_transp.png "Bioexcel")
+
+
+
+
+%prep
+%autosetup -n biobb_pmx-3.8.1
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-biobb-pmx -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 3.8.1-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
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+++ b/sources
@@ -0,0 +1 @@
+f2efea7cf5cc4c1ab0d5ff3725f8971b  biobb_pmx-3.8.1.tar.gz