automatic import of python-celescopeopeneuler20.03

3 files changed, 164 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
index e69de29..5cc613b 100644
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+++ b/.gitignore
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+/celescope-1.15.2.tar.gz
diff --git a/python-celescope.spec b/python-celescope.spec
new file mode 100644
index 0000000..a4e5a23
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+%global _empty_manifest_terminate_build 0
+Name:		python-celescope
+Version:	1.15.2
+Release:	1
+Summary:	Single Cell Analysis Pipelines
+License:	MIT License
+URL:		https://github.com/singleron-RD/CeleScope
+Source0:	https://mirrors.aliyun.com/pypi/web/packages/d4/7c/882a406973d57ed2fa85ab7f5b1600f8b53700d03423253e584287463f5c/celescope-1.15.2.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-cutadapt
+Requires:	python3-pysam
+Requires:	python3-scipy
+Requires:	python3-numpy
+Requires:	python3-jinja2
+Requires:	python3-xopen
+Requires:	python3-editdistance
+Requires:	python3-scikit-learn
+Requires:	python3-plotly
+Requires:	python3-plotnine
+Requires:	python3-matplotlib
+Requires:	python3-cython
+Requires:	python3-pytest
+Requires:	python3-venn
+Requires:	python3-pyranges
+Requires:	python3-scanpy
+Requires:	python3-statsmodels
+Requires:	python3-leidenalg
+Requires:	python3-igraph
+Requires:	python3-pandas
+Requires:	python3-biopython
+Requires:	python3-xlwt
+Requires:	python3-anndata
+Requires:	python3-kaleido
+
+%description
+
+# Introduction
+CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.
+
+# Documentation
+
+[Quick start](./docs/quick_start.md)
+
+Detailed docs can be found in [manual](./docs/manual.md).
+
+# Support
+Please use the issue tracker for questions and malfunctions.
+
+# About
+CeleScope is currently developed by Singleron Biotechnologies.
+
+[www.singleron.bio](https://www.singleron.bio)
+
+
+
+
+
+
+
+%package -n python3-celescope
+Summary:	Single Cell Analysis Pipelines
+Provides:	python-celescope
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-celescope
+
+# Introduction
+CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.
+
+# Documentation
+
+[Quick start](./docs/quick_start.md)
+
+Detailed docs can be found in [manual](./docs/manual.md).
+
+# Support
+Please use the issue tracker for questions and malfunctions.
+
+# About
+CeleScope is currently developed by Singleron Biotechnologies.
+
+[www.singleron.bio](https://www.singleron.bio)
+
+
+
+
+
+
+
+%package help
+Summary:	Development documents and examples for celescope
+Provides:	python3-celescope-doc
+%description help
+
+# Introduction
+CeleScope is a collection of bioinfomatics analysis pipelines to process single cell sequencing data generated with Singleron products. These pipelines take paired-end FASTQ files as input and generate output files which can be used for downstream data analysis as well as a summary of QC criteria.
+
+# Documentation
+
+[Quick start](./docs/quick_start.md)
+
+Detailed docs can be found in [manual](./docs/manual.md).
+
+# Support
+Please use the issue tracker for questions and malfunctions.
+
+# About
+CeleScope is currently developed by Singleron Biotechnologies.
+
+[www.singleron.bio](https://www.singleron.bio)
+
+
+
+
+
+
+
+%prep
+%autosetup -n celescope-1.15.2
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-celescope -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Fri Jun 09 2023 Python_Bot <Python_Bot@openeuler.org> - 1.15.2-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..5d18500
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+fbbff0f1e2a35a32a55d74a7ea37d83a  celescope-1.15.2.tar.gz