blob: b27d652be67ce0005484845123e763e31f867984 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
|
%global _empty_manifest_terminate_build 0
Name: python-cortexpy
Version: 0.46.5
Release: 1
Summary: The python sister project to CortexJDK
License: Apache-2.0
URL: https://github.com/winni2k/cortexpy
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/05/fd/419f56aac58384d12f2990b35d3d837000752693c65ad16fd20634f89d2f/cortexpy-0.46.5.tar.gz
BuildArch: noarch
%description
* - tests
- | |travis| |codecov|
* - package
- | |version| |wheel| |supported-versions|
| |supported-implementations| |commits-since|
* - docs
- | |readthedocs|
Cortexpy is a Python package for sequence analysis using linked and colored De Bruijn graphs such as
the ones created by Cortex_ and Mccortex_.
This project aims to mirror many of the features contained in
`CortexJDK <https://github.com/mcveanlab/CortexJDK>`_.
Cortexpy also comes with a command-line tool for basic inspection and manipulation of Cortex graphs with and without links.
%package -n python3-cortexpy
Summary: The python sister project to CortexJDK
Provides: python-cortexpy
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-cortexpy
* - tests
- | |travis| |codecov|
* - package
- | |version| |wheel| |supported-versions|
| |supported-implementations| |commits-since|
* - docs
- | |readthedocs|
Cortexpy is a Python package for sequence analysis using linked and colored De Bruijn graphs such as
the ones created by Cortex_ and Mccortex_.
This project aims to mirror many of the features contained in
`CortexJDK <https://github.com/mcveanlab/CortexJDK>`_.
Cortexpy also comes with a command-line tool for basic inspection and manipulation of Cortex graphs with and without links.
%package help
Summary: Development documents and examples for cortexpy
Provides: python3-cortexpy-doc
%description help
* - tests
- | |travis| |codecov|
* - package
- | |version| |wheel| |supported-versions|
| |supported-implementations| |commits-since|
* - docs
- | |readthedocs|
Cortexpy is a Python package for sequence analysis using linked and colored De Bruijn graphs such as
the ones created by Cortex_ and Mccortex_.
This project aims to mirror many of the features contained in
`CortexJDK <https://github.com/mcveanlab/CortexJDK>`_.
Cortexpy also comes with a command-line tool for basic inspection and manipulation of Cortex graphs with and without links.
%prep
%autosetup -n cortexpy-0.46.5
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-cortexpy -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Wed May 10 2023 Python_Bot <Python_Bot@openeuler.org> - 0.46.5-1
- Package Spec generated
|
