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%global _empty_manifest_terminate_build 0
Name: python-easypqp
Version: 0.1.37
Release: 1
Summary: EasyPQP: Simple library generation for OpenSWATH
License: BSD License
URL: https://github.com/grosenberger/easypqp
Source0: https://mirrors.aliyun.com/pypi/web/packages/7e/8e/1119deb94fc29fef4228990e68e8121e79f12f23220f29cd3381ec15321e/easypqp-0.1.37.tar.gz
BuildArch: noarch
%description
EasyPQP is a Python package that provides simplified and fast peptide query parameter generation for OpenSWATH. It can process input from MSFragger or other database search engines in pepXML format. Statistical validation can be conducted either using PyProphet or PeptideProphet/iProphet. Retention times are calibrated using an internal or external standard. In addition to a cumulative library, run-specific libraries are generated for non-linear RT alignment in OpenSWATH. For generation of PTM specific libraries that utilizes a unimod.xml database, you can further restrict the unimod.xml database file for modifications and site-specificities of interest.
%package -n python3-easypqp
Summary: EasyPQP: Simple library generation for OpenSWATH
Provides: python-easypqp
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-easypqp
EasyPQP is a Python package that provides simplified and fast peptide query parameter generation for OpenSWATH. It can process input from MSFragger or other database search engines in pepXML format. Statistical validation can be conducted either using PyProphet or PeptideProphet/iProphet. Retention times are calibrated using an internal or external standard. In addition to a cumulative library, run-specific libraries are generated for non-linear RT alignment in OpenSWATH. For generation of PTM specific libraries that utilizes a unimod.xml database, you can further restrict the unimod.xml database file for modifications and site-specificities of interest.
%package help
Summary: Development documents and examples for easypqp
Provides: python3-easypqp-doc
%description help
EasyPQP is a Python package that provides simplified and fast peptide query parameter generation for OpenSWATH. It can process input from MSFragger or other database search engines in pepXML format. Statistical validation can be conducted either using PyProphet or PeptideProphet/iProphet. Retention times are calibrated using an internal or external standard. In addition to a cumulative library, run-specific libraries are generated for non-linear RT alignment in OpenSWATH. For generation of PTM specific libraries that utilizes a unimod.xml database, you can further restrict the unimod.xml database file for modifications and site-specificities of interest.
%prep
%autosetup -n easypqp-0.1.37
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-easypqp -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.37-1
- Package Spec generated
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