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authorCoprDistGit <infra@openeuler.org>2023-06-20 06:53:53 +0000
committerCoprDistGit <infra@openeuler.org>2023-06-20 06:53:53 +0000
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tree790dbb1a02d2882266ba5e15a03ddc592a54f5df /python-extaxsi.spec
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+%global _empty_manifest_terminate_build 0
+Name: python-extaxsi
+Version: 0.3.9
+Release: 1
+Summary: Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations
+License: MIT
+URL: https://github.com/user/extaxsi
+Source0: https://mirrors.aliyun.com/pypi/web/packages/e9/0e/cffc18266d0c7812b68493ba71e0399885c145feb426cce437387e901601/extaxsi-0.3.9.tar.gz
+BuildArch: noarch
+
+
+%description
+ExTaxsI functions
+
+
+Library overview
+
+
+ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
+
+
+
+* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
+
+* db_creation() - create FASTA, accession with taxonomy or enriched database
+
+* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
+
+* sunburst_plot() - create sunburst plot
+
+* scatterplot() - create scatterplot
+
+* worldmap_plot() - create worldmap plot
+
+
+In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
+
+Input files used are available in the **examples** directory.
+
+
+ For any doubt, please write to g.agostinetto@campus.unimib.it
+
+%package -n python3-extaxsi
+Summary: Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations
+Provides: python-extaxsi
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-extaxsi
+ExTaxsI functions
+
+
+Library overview
+
+
+ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
+
+
+
+* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
+
+* db_creation() - create FASTA, accession with taxonomy or enriched database
+
+* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
+
+* sunburst_plot() - create sunburst plot
+
+* scatterplot() - create scatterplot
+
+* worldmap_plot() - create worldmap plot
+
+
+In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
+
+Input files used are available in the **examples** directory.
+
+
+ For any doubt, please write to g.agostinetto@campus.unimib.it
+
+%package help
+Summary: Development documents and examples for extaxsi
+Provides: python3-extaxsi-doc
+%description help
+ExTaxsI functions
+
+
+Library overview
+
+
+ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks:
+
+
+
+* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query
+
+* db_creation() - create FASTA, accession with taxonomy or enriched database
+
+* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa
+
+* sunburst_plot() - create sunburst plot
+
+* scatterplot() - create scatterplot
+
+* worldmap_plot() - create worldmap plot
+
+
+In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided.
+
+Input files used are available in the **examples** directory.
+
+
+ For any doubt, please write to g.agostinetto@campus.unimib.it
+
+%prep
+%autosetup -n extaxsi-0.3.9
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-extaxsi -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 0.3.9-1
+- Package Spec generated