automatic import of python-humann2

3 files changed, 74 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
index e69de29..70db018 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/humann2-2.8.2.tar.gz
diff --git a/python-humann2.spec b/python-humann2.spec
new file mode 100644
index 0000000..36caba8
--- /dev/null
+++ b/python-humann2.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-humann2
+Version:	2.8.2
+Release:	1
+Summary:	HUMAnN2: The HMP Unified Metabolic Analysis Network 2
+License:	MIT
+URL:		http://huttenhower.sph.harvard.edu/humann2
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/58/e8/d64074e0c9e8d5cef5c3a430739831eb9930fc2c3647b6dbff70ccd5a953/humann2-2.8.2.tar.gz
+BuildArch:	noarch
+
+
+%description
+HUMAnN2 is a pipeline for efficiently and accurately determining the coverage and abundance of microbial pathways in a community from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question: What are the microbes in my community-of-interest doing (or capable of doing)?
+
+%package -n python3-humann2
+Summary:	HUMAnN2: The HMP Unified Metabolic Analysis Network 2
+Provides:	python-humann2
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-humann2
+HUMAnN2 is a pipeline for efficiently and accurately determining the coverage and abundance of microbial pathways in a community from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question: What are the microbes in my community-of-interest doing (or capable of doing)?
+
+%package help
+Summary:	Development documents and examples for humann2
+Provides:	python3-humann2-doc
+%description help
+HUMAnN2 is a pipeline for efficiently and accurately determining the coverage and abundance of microbial pathways in a community from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question: What are the microbes in my community-of-interest doing (or capable of doing)?
+
+%prep
+%autosetup -n humann2-2.8.2
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-humann2 -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Wed May 31 2023 Python_Bot <Python_Bot@openeuler.org> - 2.8.2-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..075547a
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+c91d66a58d571ced71bb2cddfa66048e  humann2-2.8.2.tar.gz