automatic import of python-minFQopeneuler20.03

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+/minFQ-1.4.7.tar.gz
diff --git a/python-minfq.spec b/python-minfq.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-minFQ
+Version:	1.4.7
+Release:	1
+Summary:	Command line interface for uploading fastq files and monitoring minKNOW for minotour.
+License:	MIT
+URL:		https://github.com/LooseLab/minotourcli
+Source0:	https://mirrors.aliyun.com/pypi/web/packages/f1/d3/a2087265819052338ccba9457caae60a7c12fe1589443c5d301dafaa71e8/minFQ-1.4.7.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-tqdm
+Requires:	python3-dateutil
+Requires:	python3-requests
+Requires:	python3-numpy
+Requires:	python3-watchdog
+Requires:	python3-configargparse
+Requires:	python3-grpcio
+Requires:	python3-google
+Requires:	python3-protobuf
+Requires:	python3-pandas
+Requires:	python3-ont-fast5-api
+Requires:	python3-minknow-api
+Requires:	python3-validators
+Requires:	python3-grpcio-tools
+Requires:	python3-toml
+
+%description
+A command line client for uploading sequencing metrics from Oxford Nanopore Technologies MinKNOW to a LooseLab minoTour
+server instance.
+MinFQ only supports minknow core 4.X.X as it uses ONT's minknow-api, which is only compatible with said version of MinKNOW.
+However, base called data can be uploaded from any version of MinKNOW/Guppy.
+**To install -**
+    pip install minFQ
+**Example Commands**
+In the example commands below example parameters are:
+    - your_user_key: is the long string found in the profile section of your minoTour account.
+    - url_to_your_minotour_server: Probably 127.0.0.1, could be a remote address like minotour.nottingham.ac.uk
+    - port_for_your_server: Probably 8000
+To monitor both live and fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -ip 127.0.0.1 -hn
+    [url_to_your_minotour_server] -p [port_for_your_server]
+To monitor just live data from minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf
+To monitor live data and enable limited remote control of minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf -rc
+To monitor just fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm
+To monitor fastq statistics only. (Note you will not be able to run subsequent analysis on the server which requires sequence data).
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm -s
+To start an analysis remotely whilst uploading data. Note reference Id may not be required.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+     -p [port_for_your_server] -nm -j [job_id] -r [reference_id]
+**minFQ Gui**
+We are in the process of rebuilding a minFQ gui. Watch this space.
+
+%package -n python3-minFQ
+Summary:	Command line interface for uploading fastq files and monitoring minKNOW for minotour.
+Provides:	python-minFQ
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-minFQ
+A command line client for uploading sequencing metrics from Oxford Nanopore Technologies MinKNOW to a LooseLab minoTour
+server instance.
+MinFQ only supports minknow core 4.X.X as it uses ONT's minknow-api, which is only compatible with said version of MinKNOW.
+However, base called data can be uploaded from any version of MinKNOW/Guppy.
+**To install -**
+    pip install minFQ
+**Example Commands**
+In the example commands below example parameters are:
+    - your_user_key: is the long string found in the profile section of your minoTour account.
+    - url_to_your_minotour_server: Probably 127.0.0.1, could be a remote address like minotour.nottingham.ac.uk
+    - port_for_your_server: Probably 8000
+To monitor both live and fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -ip 127.0.0.1 -hn
+    [url_to_your_minotour_server] -p [port_for_your_server]
+To monitor just live data from minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf
+To monitor live data and enable limited remote control of minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf -rc
+To monitor just fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm
+To monitor fastq statistics only. (Note you will not be able to run subsequent analysis on the server which requires sequence data).
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm -s
+To start an analysis remotely whilst uploading data. Note reference Id may not be required.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+     -p [port_for_your_server] -nm -j [job_id] -r [reference_id]
+**minFQ Gui**
+We are in the process of rebuilding a minFQ gui. Watch this space.
+
+%package help
+Summary:	Development documents and examples for minFQ
+Provides:	python3-minFQ-doc
+%description help
+A command line client for uploading sequencing metrics from Oxford Nanopore Technologies MinKNOW to a LooseLab minoTour
+server instance.
+MinFQ only supports minknow core 4.X.X as it uses ONT's minknow-api, which is only compatible with said version of MinKNOW.
+However, base called data can be uploaded from any version of MinKNOW/Guppy.
+**To install -**
+    pip install minFQ
+**Example Commands**
+In the example commands below example parameters are:
+    - your_user_key: is the long string found in the profile section of your minoTour account.
+    - url_to_your_minotour_server: Probably 127.0.0.1, could be a remote address like minotour.nottingham.ac.uk
+    - port_for_your_server: Probably 8000
+To monitor both live and fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -ip 127.0.0.1 -hn
+    [url_to_your_minotour_server] -p [port_for_your_server]
+To monitor just live data from minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf
+To monitor live data and enable limited remote control of minKNOW.
+    minFQ -k [your_user_key] -ip 127.0.0.1 -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nf -rc
+To monitor just fastq data.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm
+To monitor fastq statistics only. (Note you will not be able to run subsequent analysis on the server which requires sequence data).
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+    -p [port_for_your_server] -nm -s
+To start an analysis remotely whilst uploading data. Note reference Id may not be required.
+    minFQ -k [your_user_key] -w /path/to/your/fastq/files -hn [url_to_your_minotour_server]
+     -p [port_for_your_server] -nm -j [job_id] -r [reference_id]
+**minFQ Gui**
+We are in the process of rebuilding a minFQ gui. Watch this space.
+
+%prep
+%autosetup -n minFQ-1.4.7
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-minFQ -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 1.4.7-1
+- Package Spec generated
diff --git a/sources b/sources
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--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+aa08d521128c12c512ea5913f5d19544  minFQ-1.4.7.tar.gz