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diff --git a/python-monet-mgdrive.spec b/python-monet-mgdrive.spec new file mode 100644 index 0000000..8c72b52 --- /dev/null +++ b/python-monet-mgdrive.spec @@ -0,0 +1,172 @@ +%global _empty_manifest_terminate_build 0 +Name: python-MoNeT-MGDrivE +Version: 0.9.0.2 +Release: 1 +Summary: MoNeT python package for MGDrivE data analysis +License: MIT +URL: https://github.com/Chipdelmal/MoNeT_MGDrivE +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f6/be/1f4438ca67775b63fc35ffdd3ade0a563c7edbd8c3b642e1297b1f97eb58/MoNeT_MGDrivE-0.9.0.2.tar.gz +BuildArch: noarch + +Requires: python3-numpy +Requires: python3-scipy +Requires: python3-matplotlib +Requires: python3-ipython +Requires: python3-jupyter +Requires: python3-pandas +Requires: python3-sympy +Requires: python3-compress-pickle +Requires: python3-joblib +Requires: python3-more-itertools + +%description + +This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible. + +It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/). + +<hr> + +## Project Status + +Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html). + +<hr> + +## Installation + +To install from pypi with pip: + +```bash +pip install MoNeT-MGDrivE +``` + +<hr> + +## Authors + +* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/) +* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen +* __PI__: [John M. Marshall](https://www.marshalllab.com/) + + + + +%package -n python3-MoNeT-MGDrivE +Summary: MoNeT python package for MGDrivE data analysis +Provides: python-MoNeT-MGDrivE +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-MoNeT-MGDrivE + +This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible. + +It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/). + +<hr> + +## Project Status + +Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html). + +<hr> + +## Installation + +To install from pypi with pip: + +```bash +pip install MoNeT-MGDrivE +``` + +<hr> + +## Authors + +* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/) +* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen +* __PI__: [John M. Marshall](https://www.marshalllab.com/) + + + + +%package help +Summary: Development documents and examples for MoNeT-MGDrivE +Provides: python3-MoNeT-MGDrivE-doc +%description help + +This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible. + +It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/). + +<hr> + +## Project Status + +Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html). + +<hr> + +## Installation + +To install from pypi with pip: + +```bash +pip install MoNeT-MGDrivE +``` + +<hr> + +## Authors + +* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/) +* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen +* __PI__: [John M. Marshall](https://www.marshalllab.com/) + + + + +%prep +%autosetup -n MoNeT-MGDrivE-0.9.0.2 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-MoNeT-MGDrivE -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.9.0.2-1 +- Package Spec generated |