1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
|
%global _empty_manifest_terminate_build 0
Name: python-MoNeT-MGDrivE
Version: 0.9.0.2
Release: 1
Summary: MoNeT python package for MGDrivE data analysis
License: MIT
URL: https://github.com/Chipdelmal/MoNeT_MGDrivE
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f6/be/1f4438ca67775b63fc35ffdd3ade0a563c7edbd8c3b642e1297b1f97eb58/MoNeT_MGDrivE-0.9.0.2.tar.gz
BuildArch: noarch
Requires: python3-numpy
Requires: python3-scipy
Requires: python3-matplotlib
Requires: python3-ipython
Requires: python3-jupyter
Requires: python3-pandas
Requires: python3-sympy
Requires: python3-compress-pickle
Requires: python3-joblib
Requires: python3-more-itertools
%description
This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible.
It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/).
<hr>
## Project Status
Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html).
<hr>
## Installation
To install from pypi with pip:
```bash
pip install MoNeT-MGDrivE
```
<hr>
## Authors
* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/)
* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen
* __PI__: [John M. Marshall](https://www.marshalllab.com/)
%package -n python3-MoNeT-MGDrivE
Summary: MoNeT python package for MGDrivE data analysis
Provides: python-MoNeT-MGDrivE
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-MoNeT-MGDrivE
This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible.
It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/).
<hr>
## Project Status
Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html).
<hr>
## Installation
To install from pypi with pip:
```bash
pip install MoNeT-MGDrivE
```
<hr>
## Authors
* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/)
* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen
* __PI__: [John M. Marshall](https://www.marshalllab.com/)
%package help
Summary: Development documents and examples for MoNeT-MGDrivE
Provides: python3-MoNeT-MGDrivE-doc
%description help
This module was created to accompany the [MGDrivE](https://marshalllab.github.io/MGDrivE/) and [MoNeT](https://chipdelmal.github.io/MoNeT/) projects to make the analysis of the spatiotemporal simulations of gene-drive spreads as seamless as possible.
It is also meant to serve as a platform to ensure the reproducibility of results of the publications from our [research group at UC, Berkeley](https://www.marshalllab.com/), as part of [DARPA's: Safe Genes program](https://www.darpa.mil/program/safe-genes) and [UCI Malaria Initiative](http://malaria.bio.uci.edu/).
<hr>
## Project Status
Our code has been used and tested in several [MGDrivE](https://marshalllab.github.io/MGDrivE/) publications. For some examples of how this package is being currently used, please follow this [link](https://chipdelmal.github.io/MoNeT/Berkeley.html).
<hr>
## Installation
To install from pypi with pip:
```bash
pip install MoNeT-MGDrivE
```
<hr>
## Authors
* __Lead__: [Héctor M. Sánchez C](https://chipdelmal.github.io/)
* __Former Dev__: Chris De León, Priscilla Zhang, Sabrina Wong, Sarafina Smith, Víctor Ferman, Biyonka Liang, Gillian Chu, Maya Shen
* __PI__: [John M. Marshall](https://www.marshalllab.com/)
%prep
%autosetup -n MoNeT-MGDrivE-0.9.0.2
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-MoNeT-MGDrivE -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.9.0.2-1
- Package Spec generated
|