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author | CoprDistGit <infra@openeuler.org> | 2023-05-05 09:31:08 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-05-05 09:31:08 +0000 |
commit | 3a839c6d56c18b71e10eb61ac99f887302eea116 (patch) | |
tree | 56686ae85e243c850534cef38129b80fd61ce8e5 | |
parent | 256e28a03205454b6aadc51447d7b4021a2854d5 (diff) |
automatic import of python-msprimeopeneuler20.03
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-msprime.spec | 172 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 174 insertions, 0 deletions
@@ -0,0 +1 @@ +/msprime-1.2.0.tar.gz diff --git a/python-msprime.spec b/python-msprime.spec new file mode 100644 index 0000000..69e1e51 --- /dev/null +++ b/python-msprime.spec @@ -0,0 +1,172 @@ +%global _empty_manifest_terminate_build 0 +Name: python-msprime +Version: 1.2.0 +Release: 1 +Summary: Simulate genealogical trees and genomic sequence data using population genetic models +License: GNU GPLv3+ +URL: https://tskit.dev/msprime +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/e6/81/8b16831a9e58151da55fd63e13d052ba27ea647022b6555964115a38c6cd/msprime-1.2.0.tar.gz +BuildArch: noarch + +Requires: python3-numpy +Requires: python3-newick +Requires: python3-tskit +Requires: python3-demes + +%description +# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg"> + + [](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml) + + +``msprime`` is a population genetics simulator +based on [tskit](https://tskit.dev). Msprime can simulate random +ancestral histories for a sample of individuals +(consistent with a given demographic model) under a +range of different models and evolutionary processes. Msprime can +also simulate mutations on a given ancestral +history (which can be produced by msprime or other programs +supporting [tskit](https://tskit.dev)) under +a variety of genome sequence evolution models. + +Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for +more details, including +[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html). + + +### Research notice +Please note that this repository is participating in a study into sustainability +of open source projects. Data will be gathered about this repository for +approximately the next 12 months, starting from 2021-06-04. + +Data collected will include number of contributors, number of PRs, time taken to +close/merge these PRs, and issues closed. + +For more information, please visit +[our informational page](https://sustainable-open-science-and-software.github.io/) +or download our +[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf). + + +%package -n python3-msprime +Summary: Simulate genealogical trees and genomic sequence data using population genetic models +Provides: python-msprime +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-msprime +# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg"> + + [](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml) + + +``msprime`` is a population genetics simulator +based on [tskit](https://tskit.dev). Msprime can simulate random +ancestral histories for a sample of individuals +(consistent with a given demographic model) under a +range of different models and evolutionary processes. Msprime can +also simulate mutations on a given ancestral +history (which can be produced by msprime or other programs +supporting [tskit](https://tskit.dev)) under +a variety of genome sequence evolution models. + +Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for +more details, including +[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html). + + +### Research notice +Please note that this repository is participating in a study into sustainability +of open source projects. Data will be gathered about this repository for +approximately the next 12 months, starting from 2021-06-04. + +Data collected will include number of contributors, number of PRs, time taken to +close/merge these PRs, and issues closed. + +For more information, please visit +[our informational page](https://sustainable-open-science-and-software.github.io/) +or download our +[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf). + + +%package help +Summary: Development documents and examples for msprime +Provides: python3-msprime-doc +%description help +# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg"> + + [](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml) + + +``msprime`` is a population genetics simulator +based on [tskit](https://tskit.dev). Msprime can simulate random +ancestral histories for a sample of individuals +(consistent with a given demographic model) under a +range of different models and evolutionary processes. Msprime can +also simulate mutations on a given ancestral +history (which can be produced by msprime or other programs +supporting [tskit](https://tskit.dev)) under +a variety of genome sequence evolution models. + +Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for +more details, including +[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html). + + +### Research notice +Please note that this repository is participating in a study into sustainability +of open source projects. Data will be gathered about this repository for +approximately the next 12 months, starting from 2021-06-04. + +Data collected will include number of contributors, number of PRs, time taken to +close/merge these PRs, and issues closed. + +For more information, please visit +[our informational page](https://sustainable-open-science-and-software.github.io/) +or download our +[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf). + + +%prep +%autosetup -n msprime-1.2.0 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-msprime -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.0-1 +- Package Spec generated @@ -0,0 +1 @@ +a3cba73118b710157ba00217e1c574a0 msprime-1.2.0.tar.gz |