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|
%global _empty_manifest_terminate_build 0
Name: python-msprime
Version: 1.2.0
Release: 1
Summary: Simulate genealogical trees and genomic sequence data using population genetic models
License: GNU GPLv3+
URL: https://tskit.dev/msprime
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/e6/81/8b16831a9e58151da55fd63e13d052ba27ea647022b6555964115a38c6cd/msprime-1.2.0.tar.gz
BuildArch: noarch
Requires: python3-numpy
Requires: python3-newick
Requires: python3-tskit
Requires: python3-demes
%description
# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg">
[](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml)
``msprime`` is a population genetics simulator
based on [tskit](https://tskit.dev). Msprime can simulate random
ancestral histories for a sample of individuals
(consistent with a given demographic model) under a
range of different models and evolutionary processes. Msprime can
also simulate mutations on a given ancestral
history (which can be produced by msprime or other programs
supporting [tskit](https://tskit.dev)) under
a variety of genome sequence evolution models.
Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for
more details, including
[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html).
### Research notice
Please note that this repository is participating in a study into sustainability
of open source projects. Data will be gathered about this repository for
approximately the next 12 months, starting from 2021-06-04.
Data collected will include number of contributors, number of PRs, time taken to
close/merge these PRs, and issues closed.
For more information, please visit
[our informational page](https://sustainable-open-science-and-software.github.io/)
or download our
[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf).
%package -n python3-msprime
Summary: Simulate genealogical trees and genomic sequence data using population genetic models
Provides: python-msprime
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-msprime
# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg">
[](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml)
``msprime`` is a population genetics simulator
based on [tskit](https://tskit.dev). Msprime can simulate random
ancestral histories for a sample of individuals
(consistent with a given demographic model) under a
range of different models and evolutionary processes. Msprime can
also simulate mutations on a given ancestral
history (which can be produced by msprime or other programs
supporting [tskit](https://tskit.dev)) under
a variety of genome sequence evolution models.
Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for
more details, including
[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html).
### Research notice
Please note that this repository is participating in a study into sustainability
of open source projects. Data will be gathered about this repository for
approximately the next 12 months, starting from 2021-06-04.
Data collected will include number of contributors, number of PRs, time taken to
close/merge these PRs, and issues closed.
For more information, please visit
[our informational page](https://sustainable-open-science-and-software.github.io/)
or download our
[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf).
%package help
Summary: Development documents and examples for msprime
Provides: python3-msprime-doc
%description help
# msprime <img align="right" width="145" height="90" src="https://raw.githubusercontent.com/tskit-dev/msprime/main/msprime_logo.svg">
[](https://circleci.com/gh/tskit-dev/msprime) [](https://codecov.io/gh/tskit-dev/msprime) [](https://pepy.tech/project/msprime) [](https://anaconda.org/conda-forge/msprime) [](https://github.com/tskit-dev/msprime/actions/workflows/docs.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/wheels.yml) [](https://github.com/tskit-dev/msprime/actions/workflows/tests.yml)
``msprime`` is a population genetics simulator
based on [tskit](https://tskit.dev). Msprime can simulate random
ancestral histories for a sample of individuals
(consistent with a given demographic model) under a
range of different models and evolutionary processes. Msprime can
also simulate mutations on a given ancestral
history (which can be produced by msprime or other programs
supporting [tskit](https://tskit.dev)) under
a variety of genome sequence evolution models.
Please see the [documentation](https://tskit.dev/msprime/docs/latest/) for
more details, including
[installation instructions](https://tskit.dev/msprime/docs/latest/installation.html).
### Research notice
Please note that this repository is participating in a study into sustainability
of open source projects. Data will be gathered about this repository for
approximately the next 12 months, starting from 2021-06-04.
Data collected will include number of contributors, number of PRs, time taken to
close/merge these PRs, and issues closed.
For more information, please visit
[our informational page](https://sustainable-open-science-and-software.github.io/)
or download our
[participant information sheet](https://sustainable-open-science-and-software.github.io/assets/PIS_sustainable_software.pdf).
%prep
%autosetup -n msprime-1.2.0
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-msprime -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.0-1
- Package Spec generated
|
