1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
|
%global _empty_manifest_terminate_build 0
Name: python-oarepo-validate
Version: 1.5.5
Release: 1
Summary: OArepo Validate library for record metadata validation
License: MIT
URL: https://github.com/oarepo/oarepo-validate
Source0: https://mirrors.aliyun.com/pypi/web/packages/c1/17/c691ed4509909174f99f0f0aacfdf20970675d4a855fd659dc669a5b20bf/oarepo-validate-1.5.5.tar.gz
BuildArch: noarch
Requires: python3-wrapt
Requires: python3-oarepo[tests]
Requires: python3-invenio-app
Requires: python3-redis
Requires: python3-markdown-toc
Requires: python3-oarepo[tests]
%description
# oarepo-validate
[![image][]][1]
[![image][2]][3]
[![image][4]][5]
[![image][6]][7]
[![image][8]][9]
[image]: https://img.shields.io/travis/oarepo/oarepo-validate.svg
[1]: https://travis-ci.com/oarepo/oarepo-validate
[2]: https://img.shields.io/coveralls/oarepo/oarepo-validate.svg
[3]: https://coveralls.io/r/oarepo/oarepo-validate
[4]: https://img.shields.io/github/tag/oarepo/oarepo-validate.svg
[5]: https://github.com/oarepo/oarepo-validate/releases
[6]: https://img.shields.io/pypi/dm/oarepo-validate.svg
[7]: https://pypi.python.org/pypi/oarepo-validate
[8]: https://img.shields.io/github/license/oarepo/oarepo-validate.svg
[9]: https://github.com/oarepo/oarepo-validate/blob/master/LICENSE
OArepo Validate library for model-level matedata validation
## Table of Contents
* [Installation](#Installation)
* [Usage](#Usage)
* [JSON schema validation](#JSON-schema-validation)
* [Create record](#Create-record)
* [PUT / PATCH record](#PUT-/-PATCH-record)
* [Marshmallow validation](#Marshmallow-validation)
* [Usage](#Usage)
* [What about marshmallow in loader?](#What-about-marshmallow-in-loader?)
* [record-files](#record-files)
* [Context](#Context)
* [Output of marshmallow validation](#Output-of-marshmallow-validation)
* [Valid data](#Valid-data)
* [Invalid data](#Invalid-data)
* [Merging process](#Merging-process)
* [Signals](#Signals)
* [Serializers](#Serializers)
## Installation
```bash
pip install oarepo-validate
```
## Usage
The library provides mixins for enforcing json schema and marshmallow validation.
### JSON schema validation
If ``$schema`` is present on metadata, invenio performs a json schema validation inside
the ``validate()`` method. The problem is that ``$schema`` can be set/removed via the REST
API. This means that an ill-written client can completely bypass the validation.
To mitigate this issue, create your own Record implementation:
```python
from oarepo_validate import SchemaKeepingRecordMixin
from invenio_records import Record
class MyRecord(SchemaKeepingRecordMixin, Record):
ALLOWED_SCHEMAS = ('records/record-v1.0.0.json', 'records/record-v2.0.0.json')
PREFERRED_SCHEMA = 'records/record-v2.0.0.json'
```
And register the record in REST endpoints in configuration:
```python
RECORD_PID = 'pid(recid,record_class="my:MyRecord")'
RECORDS_REST_ENDPOINTS = {
'records': dict(
pid_type='recid',
pid_minter='recid',
pid_fetcher='recid',
record_class='my:MyRecord',
item_route='/records/<{0}:pid_value>'.format(RECORD_PID),
# ...
)
}
```
#### Create record
When creating a new record, if ``$schema`` is not set, ``MyRecord.PREFERRED_SCHEMA`` is added
automatically. If ``$schema`` is set, it is validated against ``MyRecord.ALLOWED_SCHEMAS``
and an exception is raised if the schema is not present in ``ALLOWED_SCHEMAS``.
#### PUT / PATCH record
Before the result of the operation is committed, ``$schema`` is checked again.
### Marshmallow validation
In invenio, REST create operation use the following sequence:
```
<flask>
<invenio_records_rest.views.RecordsListResource:post>
<loader>
<marshmallow>
<permission factory>
<pid minter>
<record_class.create>
<record.commit>
<record.validate>
```
REST PUT operation then uses:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<loader>
<marshmallow>
<record.update>
<record.commit>
<record.validate>
```
REST PATCH operation:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<simple json loader>
<record.patch>
<record.commit>
<record.validate>
```
As you can see, if you place any validation code in loader's marshmallow, it is not executed.
An alternative is to have the validation code in ``validate`` and handle all validations there.
This library does exactly this - it provides a record mixin that calls marshmallow schema's ``load``
method inside its ``validate`` method.
#### Usage
Create your own record and inherit from the mixin:
```python
from oarepo_validate import MarshmallowValidatedRecordMixin
from invenio_records import Record
from marshmallow import Schema, fields
class TestSchema(Schema):
name = fields.Str(required=True)
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
```
Do not forget to register it as in the previous example.
Now marshmallow schema will be processed before each ``commit`` method.
#### What about marshmallow in loader?
In most cases, marshmallow schema in loader can be removed and a simple json loader used instead.
However, if you need a custom processing of input data that is independent of validation,
you can keep the two marshmallows. To remove marshmallow loader and use a simple one,
set ``oarepo_validate.json_loader`` as the record loader.
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
```
A special case is when the marshmallow in loader already includes validation marshmallow rules.
Then you would want to use loader's marshmallow for create / replace and marshmallow in validation
only for patch operation (so that the same marshmallow rules are not called twice). To accomplish
this, set:
```python
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
VALIDATE_MARSHMALLOW = False
VALIDATE_PATCH = True
```
``VALIDATE_MARSHMALLOW`` will switch off marshmallow validation in ``validate`` method and
``VALIDATE_PATCH`` will switch on marshmallow validation in ``patch`` method.
##### record-files
Be careful with removing the loader when you use ``invenio-record-files``. Just using plain
json loader makes it possible to set ``_bucket`` and ``_files`` directly which should be
disabled for security reasons (anyone might gain access to any file if he knows bucket and
object version of the file and has write access to any record).
To fix this, set:
```python
from oarepo_validate import FilesKeepingRecordMixin
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
class MyRecord(FilesKeepingRecordMixin, ...):
...
```
The loader will strip ``_bucket`` and ``_files`` from the payload and the mixin
will make sure that the files can not be removed with ``put`` or replaced with ``patch``
operation.
#### Context
Marshmallow validation is called with a context, that is filled with:
* ``record``
* ``pid`` if it is known
* Any ``**kwargs`` passed to ``Record.create`` or ``Record.commit``
#### Output of marshmallow validation
##### Valid data
The marshmallow loader produces validated data. Be default, the validated data are merged into
the record. The rationale for this is that the validation might be used to replace content
(include referenced content, etc). To have a consistent processing, the schema must be idempotent,
that is ``schema(schema(input)) == schema(input)``.
To prevent this behaviour, set ``MERGE_WITH_VALIDATED`` to ``False`` on your record class.
##### Invalid data
Even in the case the data are invalid, marshmallow validation might still return a partially
valid output (in ``ValidationError.valid_data``). This library merges the valid data into
the record's metadata. This behaviour can be switched off by setting
``MERGE_WITH_VALIDATED_ERROR = False``
on your record class.
##### Merging process
The merging process is recursive and is designed to preserve values in the record's metadata
if they are not present in the validated metadata. This means:
* lists are merged item-wise. If the list in the record is longer than in validated data,
extra items are kept.
* dictionaries are merged based on the same key. If a key is both in the record and in validated
data, the respective values are merged recursively and the result used. Extra keys from
validated data are copied into the record's metadata and keys present in record's metadata
and ommited from validated data are kept.
Sometimes it might be necessary to prevent this merging. The library provides:
* ``Keep(value)`` - if an instance of ``Keep`` class is returned, no merging is performed
and the value is used as is - that is, it will overwrite anything in the record
* ``DELETED`` - if this constant is returned, the item will be deleted - if it is a part of
an array, the corresponding array item in record's metadata is deleted. If it is a value
of a key in the dictionary, the corresponding key in record's metadata is deleted.
#### Signals
The library provides the following signals:
```python
before_marshmallow_validate = signal('oarepo_before_marshmallow_validate')
"""
Signal invoked before record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record being validated
:param context: marshmallow context
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
after_marshmallow_validate = signal('oarepo_after_marshmallow_validate')
"""
Signal invoked after record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record that was successfully validated
:param context: marshmallow context
:param result: result of load that will be used to update record's metadata.
Signal handler can modify it. In case of validation exception the result is None.
:param error: Exception raised when validating. None if validation has been successful
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
```
#### Serializers
If ``marhsmallow.dump`` is not required for metadata serialization,
``oarepo_validate.json_search, oarepo_validate.json_response``
are faster replacements for marshmallow-based serializers:
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_serializers={
'application/json': 'oarepo_validate:json_response',
},
search_serializers={
'application/json': 'oarepo_validate:json_search',
}
)
}
```
<!--
Copyright (C) 2020 UCT Prague.
oarepo-validate is free software; you can redistribute it and/or modify it
under the terms of the MIT License; see LICENSE file for more details.
-->
# Changes
## Version 1.2.3 (released 2020-08-30)
- Handling pid field in search hit serialization
## Version 1.2.2 (released 2020-08-25)
- Handling pid field in record serialization
## Version 1.2.1 (released 2020-08-25)
- Keeping schema in ``Record.__init__`` (useful mostly for tests)
## Version 1.2.0 (released 2020-08-25)
- Added marshmallow-less loaders and serializers
## Version 1.1.0 (released 2020-08-18)
- Added before and after validation signals.
## Version 1.0.0 (released 2020-08-16)
- Initial public release.
%package -n python3-oarepo-validate
Summary: OArepo Validate library for record metadata validation
Provides: python-oarepo-validate
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-oarepo-validate
# oarepo-validate
[![image][]][1]
[![image][2]][3]
[![image][4]][5]
[![image][6]][7]
[![image][8]][9]
[image]: https://img.shields.io/travis/oarepo/oarepo-validate.svg
[1]: https://travis-ci.com/oarepo/oarepo-validate
[2]: https://img.shields.io/coveralls/oarepo/oarepo-validate.svg
[3]: https://coveralls.io/r/oarepo/oarepo-validate
[4]: https://img.shields.io/github/tag/oarepo/oarepo-validate.svg
[5]: https://github.com/oarepo/oarepo-validate/releases
[6]: https://img.shields.io/pypi/dm/oarepo-validate.svg
[7]: https://pypi.python.org/pypi/oarepo-validate
[8]: https://img.shields.io/github/license/oarepo/oarepo-validate.svg
[9]: https://github.com/oarepo/oarepo-validate/blob/master/LICENSE
OArepo Validate library for model-level matedata validation
## Table of Contents
* [Installation](#Installation)
* [Usage](#Usage)
* [JSON schema validation](#JSON-schema-validation)
* [Create record](#Create-record)
* [PUT / PATCH record](#PUT-/-PATCH-record)
* [Marshmallow validation](#Marshmallow-validation)
* [Usage](#Usage)
* [What about marshmallow in loader?](#What-about-marshmallow-in-loader?)
* [record-files](#record-files)
* [Context](#Context)
* [Output of marshmallow validation](#Output-of-marshmallow-validation)
* [Valid data](#Valid-data)
* [Invalid data](#Invalid-data)
* [Merging process](#Merging-process)
* [Signals](#Signals)
* [Serializers](#Serializers)
## Installation
```bash
pip install oarepo-validate
```
## Usage
The library provides mixins for enforcing json schema and marshmallow validation.
### JSON schema validation
If ``$schema`` is present on metadata, invenio performs a json schema validation inside
the ``validate()`` method. The problem is that ``$schema`` can be set/removed via the REST
API. This means that an ill-written client can completely bypass the validation.
To mitigate this issue, create your own Record implementation:
```python
from oarepo_validate import SchemaKeepingRecordMixin
from invenio_records import Record
class MyRecord(SchemaKeepingRecordMixin, Record):
ALLOWED_SCHEMAS = ('records/record-v1.0.0.json', 'records/record-v2.0.0.json')
PREFERRED_SCHEMA = 'records/record-v2.0.0.json'
```
And register the record in REST endpoints in configuration:
```python
RECORD_PID = 'pid(recid,record_class="my:MyRecord")'
RECORDS_REST_ENDPOINTS = {
'records': dict(
pid_type='recid',
pid_minter='recid',
pid_fetcher='recid',
record_class='my:MyRecord',
item_route='/records/<{0}:pid_value>'.format(RECORD_PID),
# ...
)
}
```
#### Create record
When creating a new record, if ``$schema`` is not set, ``MyRecord.PREFERRED_SCHEMA`` is added
automatically. If ``$schema`` is set, it is validated against ``MyRecord.ALLOWED_SCHEMAS``
and an exception is raised if the schema is not present in ``ALLOWED_SCHEMAS``.
#### PUT / PATCH record
Before the result of the operation is committed, ``$schema`` is checked again.
### Marshmallow validation
In invenio, REST create operation use the following sequence:
```
<flask>
<invenio_records_rest.views.RecordsListResource:post>
<loader>
<marshmallow>
<permission factory>
<pid minter>
<record_class.create>
<record.commit>
<record.validate>
```
REST PUT operation then uses:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<loader>
<marshmallow>
<record.update>
<record.commit>
<record.validate>
```
REST PATCH operation:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<simple json loader>
<record.patch>
<record.commit>
<record.validate>
```
As you can see, if you place any validation code in loader's marshmallow, it is not executed.
An alternative is to have the validation code in ``validate`` and handle all validations there.
This library does exactly this - it provides a record mixin that calls marshmallow schema's ``load``
method inside its ``validate`` method.
#### Usage
Create your own record and inherit from the mixin:
```python
from oarepo_validate import MarshmallowValidatedRecordMixin
from invenio_records import Record
from marshmallow import Schema, fields
class TestSchema(Schema):
name = fields.Str(required=True)
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
```
Do not forget to register it as in the previous example.
Now marshmallow schema will be processed before each ``commit`` method.
#### What about marshmallow in loader?
In most cases, marshmallow schema in loader can be removed and a simple json loader used instead.
However, if you need a custom processing of input data that is independent of validation,
you can keep the two marshmallows. To remove marshmallow loader and use a simple one,
set ``oarepo_validate.json_loader`` as the record loader.
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
```
A special case is when the marshmallow in loader already includes validation marshmallow rules.
Then you would want to use loader's marshmallow for create / replace and marshmallow in validation
only for patch operation (so that the same marshmallow rules are not called twice). To accomplish
this, set:
```python
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
VALIDATE_MARSHMALLOW = False
VALIDATE_PATCH = True
```
``VALIDATE_MARSHMALLOW`` will switch off marshmallow validation in ``validate`` method and
``VALIDATE_PATCH`` will switch on marshmallow validation in ``patch`` method.
##### record-files
Be careful with removing the loader when you use ``invenio-record-files``. Just using plain
json loader makes it possible to set ``_bucket`` and ``_files`` directly which should be
disabled for security reasons (anyone might gain access to any file if he knows bucket and
object version of the file and has write access to any record).
To fix this, set:
```python
from oarepo_validate import FilesKeepingRecordMixin
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
class MyRecord(FilesKeepingRecordMixin, ...):
...
```
The loader will strip ``_bucket`` and ``_files`` from the payload and the mixin
will make sure that the files can not be removed with ``put`` or replaced with ``patch``
operation.
#### Context
Marshmallow validation is called with a context, that is filled with:
* ``record``
* ``pid`` if it is known
* Any ``**kwargs`` passed to ``Record.create`` or ``Record.commit``
#### Output of marshmallow validation
##### Valid data
The marshmallow loader produces validated data. Be default, the validated data are merged into
the record. The rationale for this is that the validation might be used to replace content
(include referenced content, etc). To have a consistent processing, the schema must be idempotent,
that is ``schema(schema(input)) == schema(input)``.
To prevent this behaviour, set ``MERGE_WITH_VALIDATED`` to ``False`` on your record class.
##### Invalid data
Even in the case the data are invalid, marshmallow validation might still return a partially
valid output (in ``ValidationError.valid_data``). This library merges the valid data into
the record's metadata. This behaviour can be switched off by setting
``MERGE_WITH_VALIDATED_ERROR = False``
on your record class.
##### Merging process
The merging process is recursive and is designed to preserve values in the record's metadata
if they are not present in the validated metadata. This means:
* lists are merged item-wise. If the list in the record is longer than in validated data,
extra items are kept.
* dictionaries are merged based on the same key. If a key is both in the record and in validated
data, the respective values are merged recursively and the result used. Extra keys from
validated data are copied into the record's metadata and keys present in record's metadata
and ommited from validated data are kept.
Sometimes it might be necessary to prevent this merging. The library provides:
* ``Keep(value)`` - if an instance of ``Keep`` class is returned, no merging is performed
and the value is used as is - that is, it will overwrite anything in the record
* ``DELETED`` - if this constant is returned, the item will be deleted - if it is a part of
an array, the corresponding array item in record's metadata is deleted. If it is a value
of a key in the dictionary, the corresponding key in record's metadata is deleted.
#### Signals
The library provides the following signals:
```python
before_marshmallow_validate = signal('oarepo_before_marshmallow_validate')
"""
Signal invoked before record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record being validated
:param context: marshmallow context
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
after_marshmallow_validate = signal('oarepo_after_marshmallow_validate')
"""
Signal invoked after record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record that was successfully validated
:param context: marshmallow context
:param result: result of load that will be used to update record's metadata.
Signal handler can modify it. In case of validation exception the result is None.
:param error: Exception raised when validating. None if validation has been successful
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
```
#### Serializers
If ``marhsmallow.dump`` is not required for metadata serialization,
``oarepo_validate.json_search, oarepo_validate.json_response``
are faster replacements for marshmallow-based serializers:
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_serializers={
'application/json': 'oarepo_validate:json_response',
},
search_serializers={
'application/json': 'oarepo_validate:json_search',
}
)
}
```
<!--
Copyright (C) 2020 UCT Prague.
oarepo-validate is free software; you can redistribute it and/or modify it
under the terms of the MIT License; see LICENSE file for more details.
-->
# Changes
## Version 1.2.3 (released 2020-08-30)
- Handling pid field in search hit serialization
## Version 1.2.2 (released 2020-08-25)
- Handling pid field in record serialization
## Version 1.2.1 (released 2020-08-25)
- Keeping schema in ``Record.__init__`` (useful mostly for tests)
## Version 1.2.0 (released 2020-08-25)
- Added marshmallow-less loaders and serializers
## Version 1.1.0 (released 2020-08-18)
- Added before and after validation signals.
## Version 1.0.0 (released 2020-08-16)
- Initial public release.
%package help
Summary: Development documents and examples for oarepo-validate
Provides: python3-oarepo-validate-doc
%description help
# oarepo-validate
[![image][]][1]
[![image][2]][3]
[![image][4]][5]
[![image][6]][7]
[![image][8]][9]
[image]: https://img.shields.io/travis/oarepo/oarepo-validate.svg
[1]: https://travis-ci.com/oarepo/oarepo-validate
[2]: https://img.shields.io/coveralls/oarepo/oarepo-validate.svg
[3]: https://coveralls.io/r/oarepo/oarepo-validate
[4]: https://img.shields.io/github/tag/oarepo/oarepo-validate.svg
[5]: https://github.com/oarepo/oarepo-validate/releases
[6]: https://img.shields.io/pypi/dm/oarepo-validate.svg
[7]: https://pypi.python.org/pypi/oarepo-validate
[8]: https://img.shields.io/github/license/oarepo/oarepo-validate.svg
[9]: https://github.com/oarepo/oarepo-validate/blob/master/LICENSE
OArepo Validate library for model-level matedata validation
## Table of Contents
* [Installation](#Installation)
* [Usage](#Usage)
* [JSON schema validation](#JSON-schema-validation)
* [Create record](#Create-record)
* [PUT / PATCH record](#PUT-/-PATCH-record)
* [Marshmallow validation](#Marshmallow-validation)
* [Usage](#Usage)
* [What about marshmallow in loader?](#What-about-marshmallow-in-loader?)
* [record-files](#record-files)
* [Context](#Context)
* [Output of marshmallow validation](#Output-of-marshmallow-validation)
* [Valid data](#Valid-data)
* [Invalid data](#Invalid-data)
* [Merging process](#Merging-process)
* [Signals](#Signals)
* [Serializers](#Serializers)
## Installation
```bash
pip install oarepo-validate
```
## Usage
The library provides mixins for enforcing json schema and marshmallow validation.
### JSON schema validation
If ``$schema`` is present on metadata, invenio performs a json schema validation inside
the ``validate()`` method. The problem is that ``$schema`` can be set/removed via the REST
API. This means that an ill-written client can completely bypass the validation.
To mitigate this issue, create your own Record implementation:
```python
from oarepo_validate import SchemaKeepingRecordMixin
from invenio_records import Record
class MyRecord(SchemaKeepingRecordMixin, Record):
ALLOWED_SCHEMAS = ('records/record-v1.0.0.json', 'records/record-v2.0.0.json')
PREFERRED_SCHEMA = 'records/record-v2.0.0.json'
```
And register the record in REST endpoints in configuration:
```python
RECORD_PID = 'pid(recid,record_class="my:MyRecord")'
RECORDS_REST_ENDPOINTS = {
'records': dict(
pid_type='recid',
pid_minter='recid',
pid_fetcher='recid',
record_class='my:MyRecord',
item_route='/records/<{0}:pid_value>'.format(RECORD_PID),
# ...
)
}
```
#### Create record
When creating a new record, if ``$schema`` is not set, ``MyRecord.PREFERRED_SCHEMA`` is added
automatically. If ``$schema`` is set, it is validated against ``MyRecord.ALLOWED_SCHEMAS``
and an exception is raised if the schema is not present in ``ALLOWED_SCHEMAS``.
#### PUT / PATCH record
Before the result of the operation is committed, ``$schema`` is checked again.
### Marshmallow validation
In invenio, REST create operation use the following sequence:
```
<flask>
<invenio_records_rest.views.RecordsListResource:post>
<loader>
<marshmallow>
<permission factory>
<pid minter>
<record_class.create>
<record.commit>
<record.validate>
```
REST PUT operation then uses:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<loader>
<marshmallow>
<record.update>
<record.commit>
<record.validate>
```
REST PATCH operation:
```
<flask>
<invenio_records_rest.views.RecordResource:put>
<permission factory>
<simple json loader>
<record.patch>
<record.commit>
<record.validate>
```
As you can see, if you place any validation code in loader's marshmallow, it is not executed.
An alternative is to have the validation code in ``validate`` and handle all validations there.
This library does exactly this - it provides a record mixin that calls marshmallow schema's ``load``
method inside its ``validate`` method.
#### Usage
Create your own record and inherit from the mixin:
```python
from oarepo_validate import MarshmallowValidatedRecordMixin
from invenio_records import Record
from marshmallow import Schema, fields
class TestSchema(Schema):
name = fields.Str(required=True)
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
```
Do not forget to register it as in the previous example.
Now marshmallow schema will be processed before each ``commit`` method.
#### What about marshmallow in loader?
In most cases, marshmallow schema in loader can be removed and a simple json loader used instead.
However, if you need a custom processing of input data that is independent of validation,
you can keep the two marshmallows. To remove marshmallow loader and use a simple one,
set ``oarepo_validate.json_loader`` as the record loader.
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
```
A special case is when the marshmallow in loader already includes validation marshmallow rules.
Then you would want to use loader's marshmallow for create / replace and marshmallow in validation
only for patch operation (so that the same marshmallow rules are not called twice). To accomplish
this, set:
```python
class MyRecord(MarshmallowValidatedRecordMixin, Record):
MARSHMALLOW_SCHEMA = TestSchema
VALIDATE_MARSHMALLOW = False
VALIDATE_PATCH = True
```
``VALIDATE_MARSHMALLOW`` will switch off marshmallow validation in ``validate`` method and
``VALIDATE_PATCH`` will switch on marshmallow validation in ``patch`` method.
##### record-files
Be careful with removing the loader when you use ``invenio-record-files``. Just using plain
json loader makes it possible to set ``_bucket`` and ``_files`` directly which should be
disabled for security reasons (anyone might gain access to any file if he knows bucket and
object version of the file and has write access to any record).
To fix this, set:
```python
from oarepo_validate import FilesKeepingRecordMixin
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_loaders={
'application/json': 'oarepo_validate:json_loader',
},
# ...
)
}
class MyRecord(FilesKeepingRecordMixin, ...):
...
```
The loader will strip ``_bucket`` and ``_files`` from the payload and the mixin
will make sure that the files can not be removed with ``put`` or replaced with ``patch``
operation.
#### Context
Marshmallow validation is called with a context, that is filled with:
* ``record``
* ``pid`` if it is known
* Any ``**kwargs`` passed to ``Record.create`` or ``Record.commit``
#### Output of marshmallow validation
##### Valid data
The marshmallow loader produces validated data. Be default, the validated data are merged into
the record. The rationale for this is that the validation might be used to replace content
(include referenced content, etc). To have a consistent processing, the schema must be idempotent,
that is ``schema(schema(input)) == schema(input)``.
To prevent this behaviour, set ``MERGE_WITH_VALIDATED`` to ``False`` on your record class.
##### Invalid data
Even in the case the data are invalid, marshmallow validation might still return a partially
valid output (in ``ValidationError.valid_data``). This library merges the valid data into
the record's metadata. This behaviour can be switched off by setting
``MERGE_WITH_VALIDATED_ERROR = False``
on your record class.
##### Merging process
The merging process is recursive and is designed to preserve values in the record's metadata
if they are not present in the validated metadata. This means:
* lists are merged item-wise. If the list in the record is longer than in validated data,
extra items are kept.
* dictionaries are merged based on the same key. If a key is both in the record and in validated
data, the respective values are merged recursively and the result used. Extra keys from
validated data are copied into the record's metadata and keys present in record's metadata
and ommited from validated data are kept.
Sometimes it might be necessary to prevent this merging. The library provides:
* ``Keep(value)`` - if an instance of ``Keep`` class is returned, no merging is performed
and the value is used as is - that is, it will overwrite anything in the record
* ``DELETED`` - if this constant is returned, the item will be deleted - if it is a part of
an array, the corresponding array item in record's metadata is deleted. If it is a value
of a key in the dictionary, the corresponding key in record's metadata is deleted.
#### Signals
The library provides the following signals:
```python
before_marshmallow_validate = signal('oarepo_before_marshmallow_validate')
"""
Signal invoked before record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record being validated
:param context: marshmallow context
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
after_marshmallow_validate = signal('oarepo_after_marshmallow_validate')
"""
Signal invoked after record metadata are validated (loaded by marshmallow schema)
inside Record.validate
:param source: the record being validated
:param record: the record that was successfully validated
:param context: marshmallow context
:param result: result of load that will be used to update record's metadata.
Signal handler can modify it. In case of validation exception the result is None.
:param error: Exception raised when validating. None if validation has been successful
:param **kwargs: kwargs passed to Record.create or Record.commit (or Record.validate)
"""
```
#### Serializers
If ``marhsmallow.dump`` is not required for metadata serialization,
``oarepo_validate.json_search, oarepo_validate.json_response``
are faster replacements for marshmallow-based serializers:
```python
RECORDS_REST_ENDPOINTS = {
'recid': dict(
record_serializers={
'application/json': 'oarepo_validate:json_response',
},
search_serializers={
'application/json': 'oarepo_validate:json_search',
}
)
}
```
<!--
Copyright (C) 2020 UCT Prague.
oarepo-validate is free software; you can redistribute it and/or modify it
under the terms of the MIT License; see LICENSE file for more details.
-->
# Changes
## Version 1.2.3 (released 2020-08-30)
- Handling pid field in search hit serialization
## Version 1.2.2 (released 2020-08-25)
- Handling pid field in record serialization
## Version 1.2.1 (released 2020-08-25)
- Keeping schema in ``Record.__init__`` (useful mostly for tests)
## Version 1.2.0 (released 2020-08-25)
- Added marshmallow-less loaders and serializers
## Version 1.1.0 (released 2020-08-18)
- Added before and after validation signals.
## Version 1.0.0 (released 2020-08-16)
- Initial public release.
%prep
%autosetup -n oarepo-validate-1.5.5
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-oarepo-validate -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 1.5.5-1
- Package Spec generated
|