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diff --git a/python-ont-fast5-api.spec b/python-ont-fast5-api.spec new file mode 100644 index 0000000..f0a7d71 --- /dev/null +++ b/python-ont-fast5-api.spec @@ -0,0 +1,100 @@ +%global _empty_manifest_terminate_build 0 +Name: python-ont-fast5-api +Version: 4.1.1 +Release: 1 +Summary: Oxford Nanopore Technologies fast5 API software +License: MPL 2.0 +URL: https://github.com/nanoporetech/ont_fast5_api +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/af/0b/c5926a70364edaecd291a9cd062e94892b140c6b2e58c6c2bd7c0a907a4e/ont-fast5-api-4.1.1.tar.gz +BuildArch: noarch + +Requires: python3-h5py +Requires: python3-numpy +Requires: python3-packaging +Requires: python3-progressbar33 + +%description +``ont_fast5_api`` is a simple interface to HDF5 files of the Oxford Nanopore +.fast5 file format. +- Source code: https://github.com/nanoporetech/ont_fast5_api +- Fast5 File Schema: https://github.com/nanoporetech/ont_h5_validator +It provides: +- Concrete implementation of the fast5 file schema using the generic h5py library +- Plain-english-named methods to interact with and reflect the fast5 file schema +- Tools to convert between `multi_read` and `single_read` formats +- Tools to compress/decompress raw data in files + +%package -n python3-ont-fast5-api +Summary: Oxford Nanopore Technologies fast5 API software +Provides: python-ont-fast5-api +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-ont-fast5-api +``ont_fast5_api`` is a simple interface to HDF5 files of the Oxford Nanopore +.fast5 file format. +- Source code: https://github.com/nanoporetech/ont_fast5_api +- Fast5 File Schema: https://github.com/nanoporetech/ont_h5_validator +It provides: +- Concrete implementation of the fast5 file schema using the generic h5py library +- Plain-english-named methods to interact with and reflect the fast5 file schema +- Tools to convert between `multi_read` and `single_read` formats +- Tools to compress/decompress raw data in files + +%package help +Summary: Development documents and examples for ont-fast5-api +Provides: python3-ont-fast5-api-doc +%description help +``ont_fast5_api`` is a simple interface to HDF5 files of the Oxford Nanopore +.fast5 file format. +- Source code: https://github.com/nanoporetech/ont_fast5_api +- Fast5 File Schema: https://github.com/nanoporetech/ont_h5_validator +It provides: +- Concrete implementation of the fast5 file schema using the generic h5py library +- Plain-english-named methods to interact with and reflect the fast5 file schema +- Tools to convert between `multi_read` and `single_read` formats +- Tools to compress/decompress raw data in files + +%prep +%autosetup -n ont-fast5-api-4.1.1 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-ont-fast5-api -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 4.1.1-1 +- Package Spec generated |