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%global _empty_manifest_terminate_build 0
Name: python-patientMatcher
Version: 4.3
Release: 1
Summary: A python and MongoDB-based Matchmaker Exchange server
License: MIT
URL: https://github.com/Clinical-Genomics/patientMatcher
Source0: https://mirrors.aliyun.com/pypi/web/packages/4e/e9/89066152d4e630d8489b7e7ffd4b26d0557723b48d1d9b1807562c327c0e/patientMatcher-4.3.tar.gz
BuildArch: noarch
Requires: python3-coloredlogs
Requires: python3-Flask
Requires: python3-Flask-Mail
Requires: python3-flask-negotiate
Requires: python3-requests
Requires: python3-responses
Requires: python3-jsonschema
Requires: python3-pymongo
Requires: python3-enlighten
Requires: python3-clint
%description
# patientMatcher - a Python and MongoDB - based MatchMaker Exchange server
[](https://travis-ci.com/Clinical-Genomics/patientMatcher) [](https://codecov.io/gh/Clinical-Genomics/patientMatcher)
[](https://doi.org/10.1002/humu.24358)
PatientMatcher is a **Python** (Flask) and **MongoDB** - based implementation of a [MatchMaker Exchange](https://www.matchmakerexchange.org/) (MME) server, developed and actively maintained by [Clinical Genomics, Science For Life Laboratory in Stockholm](https://www.scilifelab.se/units/clinical-genomics-stockholm/). PatientMatcher is designed as a standalone application, but can easily communicate with external applications via REST API. The MME Stockholm node is being implemented in clinical production in collaboration with the Genomic Medicine Center Karolinska at the Karolinska University Hospital.
Info on how to test PatientMatcher or to set up a server containing an app frontend and backend is available on the [documentation pages](https://clinical-genomics.github.io/patientMatcher).
[travis-url]: https://travis-ci.org/Clinical-Genomics/patientMatcher
[travis-image]: https://img.shields.io/travis/Clinical-Genomics/patientMatcher.svg?style=flat-square
%package -n python3-patientMatcher
Summary: A python and MongoDB-based Matchmaker Exchange server
Provides: python-patientMatcher
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-patientMatcher
# patientMatcher - a Python and MongoDB - based MatchMaker Exchange server
[](https://travis-ci.com/Clinical-Genomics/patientMatcher) [](https://codecov.io/gh/Clinical-Genomics/patientMatcher)
[](https://doi.org/10.1002/humu.24358)
PatientMatcher is a **Python** (Flask) and **MongoDB** - based implementation of a [MatchMaker Exchange](https://www.matchmakerexchange.org/) (MME) server, developed and actively maintained by [Clinical Genomics, Science For Life Laboratory in Stockholm](https://www.scilifelab.se/units/clinical-genomics-stockholm/). PatientMatcher is designed as a standalone application, but can easily communicate with external applications via REST API. The MME Stockholm node is being implemented in clinical production in collaboration with the Genomic Medicine Center Karolinska at the Karolinska University Hospital.
Info on how to test PatientMatcher or to set up a server containing an app frontend and backend is available on the [documentation pages](https://clinical-genomics.github.io/patientMatcher).
[travis-url]: https://travis-ci.org/Clinical-Genomics/patientMatcher
[travis-image]: https://img.shields.io/travis/Clinical-Genomics/patientMatcher.svg?style=flat-square
%package help
Summary: Development documents and examples for patientMatcher
Provides: python3-patientMatcher-doc
%description help
# patientMatcher - a Python and MongoDB - based MatchMaker Exchange server
[](https://travis-ci.com/Clinical-Genomics/patientMatcher) [](https://codecov.io/gh/Clinical-Genomics/patientMatcher)
[](https://doi.org/10.1002/humu.24358)
PatientMatcher is a **Python** (Flask) and **MongoDB** - based implementation of a [MatchMaker Exchange](https://www.matchmakerexchange.org/) (MME) server, developed and actively maintained by [Clinical Genomics, Science For Life Laboratory in Stockholm](https://www.scilifelab.se/units/clinical-genomics-stockholm/). PatientMatcher is designed as a standalone application, but can easily communicate with external applications via REST API. The MME Stockholm node is being implemented in clinical production in collaboration with the Genomic Medicine Center Karolinska at the Karolinska University Hospital.
Info on how to test PatientMatcher or to set up a server containing an app frontend and backend is available on the [documentation pages](https://clinical-genomics.github.io/patientMatcher).
[travis-url]: https://travis-ci.org/Clinical-Genomics/patientMatcher
[travis-image]: https://img.shields.io/travis/Clinical-Genomics/patientMatcher.svg?style=flat-square
%prep
%autosetup -n patientMatcher-4.3
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-patientMatcher -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 4.3-1
- Package Spec generated
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