diff options
| author | CoprDistGit <infra@openeuler.org> | 2023-05-05 14:25:25 +0000 |
|---|---|---|
| committer | CoprDistGit <infra@openeuler.org> | 2023-05-05 14:25:25 +0000 |
| commit | f459a26cc313625a3d29d3cfcc600635b8cbdc61 (patch) | |
| tree | efca1898eff86916c0efba728d1ab2859e721d31 | |
| parent | 282a750e293df6cefe80788b64cf84a2f23dff7f (diff) | |
automatic import of python-pyabcopeneuler20.03
| -rw-r--r-- | .gitignore | 1 | ||||
| -rw-r--r-- | python-pyabc.spec | 156 | ||||
| -rw-r--r-- | sources | 1 |
3 files changed, 158 insertions, 0 deletions
@@ -0,0 +1 @@ +/pyabc-0.12.9.tar.gz diff --git a/python-pyabc.spec b/python-pyabc.spec new file mode 100644 index 0000000..b881c9a --- /dev/null +++ b/python-pyabc.spec @@ -0,0 +1,156 @@ +%global _empty_manifest_terminate_build 0 +Name: python-pyabc +Version: 0.12.9 +Release: 1 +Summary: Distributed, likelihood-free ABC-SMC inference +License: BSD-3-Clause +URL: https://github.com/icb-dcm/pyabc +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f1/67/cbf5104e5c29b2b10b1a5f65bccbd268376993b32e04f48b33a03c144911/pyabc-0.12.9.tar.gz +BuildArch: noarch + +Requires: python3-numpy +Requires: python3-scipy +Requires: python3-pandas +Requires: python3-cloudpickle +Requires: python3-scikit-learn +Requires: python3-click +Requires: python3-redis +Requires: python3-distributed +Requires: python3-matplotlib +Requires: python3-sqlalchemy +Requires: python3-jabbar +Requires: python3-gitpython +Requires: python3-rpy2 +Requires: python3-cffi +Requires: python3-ipython +Requires: python3-pygments +Requires: python3-amici +Requires: python3-autograd +Requires: python3-copasi-basico +Requires: python3-sphinx +Requires: python3-nbsphinx +Requires: python3-nbconvert +Requires: python3-sphinx-rtd-theme +Requires: python3-sphinx-autodoc-typehints +Requires: python3-ipython +Requires: python3-notebook +Requires: python3-julia +Requires: python3-pygments +Requires: python3-alembic +Requires: python3-pot +Requires: python3-petab +Requires: python3-plotly +Requires: python3-kaleido +Requires: python3-pyarrow +Requires: python3-pytest +Requires: python3-pytest-cov +Requires: python3-pytest-rerunfailures +Requires: python3-petabtests +Requires: python3-flask-bootstrap +Requires: python3-flask +Requires: python3-bokeh +Requires: python3-yaml2sbml + +%description +|CI| |docs| |codecov| |pypi| |doi| |black| +Massively parallel, distributed and scalable ABC-SMC +(Approximate Bayesian Computation - Sequential Monte Carlo) +for parameter estimation of complex stochastic models. +Provides numerous state-of-the-art algorithms for +efficient, accurate, robust likelihood-free inference, +described in the documentation and illustrated in example +notebooks. +Written in Python with support for especially R and Julia. +- **Documentation:** https://pyabc.rtfd.io +- **Examples:** http://pyabc.rtfd.io/en/latest/examples.html +- **Contact:** https://pyabc.rtfd.io/en/latest/about.html +- **Bug reports:** https://github.com/icb-dcm/pyabc/issues +- **Source code:** https://github.com/icb-dcm/pyabc +- **Cite:** https://pyabc.rtfd.io/en/latest/cite.html + +%package -n python3-pyabc +Summary: Distributed, likelihood-free ABC-SMC inference +Provides: python-pyabc +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-pyabc +|CI| |docs| |codecov| |pypi| |doi| |black| +Massively parallel, distributed and scalable ABC-SMC +(Approximate Bayesian Computation - Sequential Monte Carlo) +for parameter estimation of complex stochastic models. +Provides numerous state-of-the-art algorithms for +efficient, accurate, robust likelihood-free inference, +described in the documentation and illustrated in example +notebooks. +Written in Python with support for especially R and Julia. +- **Documentation:** https://pyabc.rtfd.io +- **Examples:** http://pyabc.rtfd.io/en/latest/examples.html +- **Contact:** https://pyabc.rtfd.io/en/latest/about.html +- **Bug reports:** https://github.com/icb-dcm/pyabc/issues +- **Source code:** https://github.com/icb-dcm/pyabc +- **Cite:** https://pyabc.rtfd.io/en/latest/cite.html + +%package help +Summary: Development documents and examples for pyabc +Provides: python3-pyabc-doc +%description help +|CI| |docs| |codecov| |pypi| |doi| |black| +Massively parallel, distributed and scalable ABC-SMC +(Approximate Bayesian Computation - Sequential Monte Carlo) +for parameter estimation of complex stochastic models. +Provides numerous state-of-the-art algorithms for +efficient, accurate, robust likelihood-free inference, +described in the documentation and illustrated in example +notebooks. +Written in Python with support for especially R and Julia. +- **Documentation:** https://pyabc.rtfd.io +- **Examples:** http://pyabc.rtfd.io/en/latest/examples.html +- **Contact:** https://pyabc.rtfd.io/en/latest/about.html +- **Bug reports:** https://github.com/icb-dcm/pyabc/issues +- **Source code:** https://github.com/icb-dcm/pyabc +- **Cite:** https://pyabc.rtfd.io/en/latest/cite.html + +%prep +%autosetup -n pyabc-0.12.9 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-pyabc -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.12.9-1 +- Package Spec generated @@ -0,0 +1 @@ +0b4fae8796b0571800f210d9b2a365db pyabc-0.12.9.tar.gz |
