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%global _empty_manifest_terminate_build 0
Name: python-read-roi
Version: 1.6.0
Release: 1
Summary: Read ROI files .zip or .roi generated with ImageJ.
License: BSD License
URL: https://github.com/hadim/read-roi/
Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f4/d9/f59d53def03ad40c4908d231520e3080753701ee00f13bea2f884ea97ec9/read-roi-1.6.0.tar.gz
BuildArch: noarch
%description
# read-roi
[](https://pypi.org/project/read-roi/)
[](https://travis-ci.com/hadim/read-roi)
[](https://codecov.io/gh/hadim/read-roi)
Read ROI files .zip or .roi generated with ImageJ. Code is largely inspired from : http://rsb.info.nih.gov/ij/developer/source/ij/io/RoiDecoder.java.html
## Functions
```python
from read_roi import read_roi_file
from read_roi import read_roi_zip
roi = read_roi_file(roi_file_path)
# or
rois = read_roi_zip(roi_zip_path)
```
## Note
- Some format specifications are not implemented. See `RoiDecoder.java` for details.
- Most of "normal" ROI files should work.
- Feel free to hack it and send me modifications.
## Requirements
- Python 3.5 and above.
## Install
`pip install read-roi`
Or you can use Anaconda and `conda-forge` :
```
conda config --add channels conda-forge
conda install read-roi
```
## License
Under BSD license. See [LICENSE](LICENSE).
## Authors
- Hadrien Mary <hadrien.mary@gmail.com>
## Release a new version
- Run tests: `pytest -v read_roi/`.
- Install [rever](https://regro.github.io/rever-docs): `conda install -y rever`.
- Run check: `rever check`.
- Bump and release new version: `rever VERSION_NUMBER`.
%package -n python3-read-roi
Summary: Read ROI files .zip or .roi generated with ImageJ.
Provides: python-read-roi
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-read-roi
# read-roi
[](https://pypi.org/project/read-roi/)
[](https://travis-ci.com/hadim/read-roi)
[](https://codecov.io/gh/hadim/read-roi)
Read ROI files .zip or .roi generated with ImageJ. Code is largely inspired from : http://rsb.info.nih.gov/ij/developer/source/ij/io/RoiDecoder.java.html
## Functions
```python
from read_roi import read_roi_file
from read_roi import read_roi_zip
roi = read_roi_file(roi_file_path)
# or
rois = read_roi_zip(roi_zip_path)
```
## Note
- Some format specifications are not implemented. See `RoiDecoder.java` for details.
- Most of "normal" ROI files should work.
- Feel free to hack it and send me modifications.
## Requirements
- Python 3.5 and above.
## Install
`pip install read-roi`
Or you can use Anaconda and `conda-forge` :
```
conda config --add channels conda-forge
conda install read-roi
```
## License
Under BSD license. See [LICENSE](LICENSE).
## Authors
- Hadrien Mary <hadrien.mary@gmail.com>
## Release a new version
- Run tests: `pytest -v read_roi/`.
- Install [rever](https://regro.github.io/rever-docs): `conda install -y rever`.
- Run check: `rever check`.
- Bump and release new version: `rever VERSION_NUMBER`.
%package help
Summary: Development documents and examples for read-roi
Provides: python3-read-roi-doc
%description help
# read-roi
[](https://pypi.org/project/read-roi/)
[](https://travis-ci.com/hadim/read-roi)
[](https://codecov.io/gh/hadim/read-roi)
Read ROI files .zip or .roi generated with ImageJ. Code is largely inspired from : http://rsb.info.nih.gov/ij/developer/source/ij/io/RoiDecoder.java.html
## Functions
```python
from read_roi import read_roi_file
from read_roi import read_roi_zip
roi = read_roi_file(roi_file_path)
# or
rois = read_roi_zip(roi_zip_path)
```
## Note
- Some format specifications are not implemented. See `RoiDecoder.java` for details.
- Most of "normal" ROI files should work.
- Feel free to hack it and send me modifications.
## Requirements
- Python 3.5 and above.
## Install
`pip install read-roi`
Or you can use Anaconda and `conda-forge` :
```
conda config --add channels conda-forge
conda install read-roi
```
## License
Under BSD license. See [LICENSE](LICENSE).
## Authors
- Hadrien Mary <hadrien.mary@gmail.com>
## Release a new version
- Run tests: `pytest -v read_roi/`.
- Install [rever](https://regro.github.io/rever-docs): `conda install -y rever`.
- Run check: `rever check`.
- Bump and release new version: `rever VERSION_NUMBER`.
%prep
%autosetup -n read-roi-1.6.0
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-read-roi -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue May 30 2023 Python_Bot <Python_Bot@openeuler.org> - 1.6.0-1
- Package Spec generated
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